RNA–Protein interactions for RNA: ENSMUST00000100778.4

Gm6288-201, mousemouse

TSL 1 (best) BASIC

Gene Gm6288, Length 1,590 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6288-201ENSMUST00000100778 Mapk8ip2Q9ERE9 830 aa19.56■□□□□ 0.72
Gm6288-201ENSMUST00000100778 Chic1Q8CBW7 227 aa18.1■□□□□ 0.49
Gm6288-201ENSMUST00000100778 Phf23Q8BSN5 401 aa16.01■□□□□ 0.15
Gm6288-201ENSMUST00000100778 Plppr3Q7TPB0 716 aa15.6■□□□□ 0.09
Gm6288-201ENSMUST00000100778 Gab3Q8BSM5 595 aa15.28■□□□□ 0.04
Gm6288-201ENSMUST00000100778 Fam163aQ8CAA5 168 aa15.18■□□□□ 0.02
Gm6288-201ENSMUST00000100778 GapdhsQ64467 440 aa15.03■□□□□ -0
Gm6288-201ENSMUST00000100778 Senp3Q9EP97 568 aaKnown RBP14.62□□□□□ -0.07
Gm6288-201ENSMUST00000100778 Kcna4Q61423 654 aa14.5□□□□□ -0.09
Gm6288-201ENSMUST00000100778 ArsiQ32KI9 573 aa13.61□□□□□ -0.23
Gm6288-201ENSMUST00000100778 Slc34a2Q9DBP0 697 aa13.6□□□□□ -0.23
Gm6288-201ENSMUST00000100778 Ppargc1bQ8VHJ7 1014 aa13.13□□□□□ -0.31
Gm6288-201ENSMUST00000100778 Hoxd11P23813 323 aa13.05□□□□□ -0.32
Gm6288-201ENSMUST00000100778 Trap1aP19473 224 aa13.03□□□□□ -0.32
Gm6288-201ENSMUST00000100778 Dmrt2Q8BG36 561 aa12.96□□□□□ -0.33
Gm6288-201ENSMUST00000100778 Znf219Q6IQX8 726 aa12.84□□□□□ -0.35
Gm6288-201ENSMUST00000100778 Slc4a1apE9PX68 744 aa12.69□□□□□ -0.38
Gm6288-201ENSMUST00000100778 Dnajc5bQ9CQ94 199 aa12.64□□□□□ -0.39
Gm6288-201ENSMUST00000100778 Ube2uB1AUC4 352 aa12.43□□□□□ -0.42
Gm6288-201ENSMUST00000100778 Chrna2Q91X60 512 aa12.26□□□□□ -0.45
Gm6288-201ENSMUST00000100778 Akt1s1Q9D1F4 257 aa12.26□□□□□ -0.45
Gm6288-201ENSMUST00000100778 Slc4a5E9Q3M5 1116 aa12.17□□□□□ -0.46
Gm6288-201ENSMUST00000100778 Ppp4r2Q0VGB7 417 aa12.16□□□□□ -0.46
Gm6288-201ENSMUST00000100778 Atf5O70191 283 aa12.15□□□□□ -0.46
Gm6288-201ENSMUST00000100778 Rsph4aQ8BYM7 716 aa12.13□□□□□ -0.47
Gm6288-201ENSMUST00000100778 Cacnb1Q8R3Z5 597 aa12.13□□□□□ -0.47
Gm6288-201ENSMUST00000100778 Znf704Q9ERQ3 566 aa12.13□□□□□ -0.47
Gm6288-201ENSMUST00000100778 Hs6st3Q9QYK4 470 aa12.05□□□□□ -0.48
Gm6288-201ENSMUST00000100778 1700123L14RikQ3V2K7 440 aa12.01□□□□□ -0.49
Gm6288-201ENSMUST00000100778 Fam71e1A1L3C1 212 aa11.94□□□□□ -0.5
Gm6288-201ENSMUST00000100778 Rimbp2Q80U40 1072 aa11.9□□□□□ -0.5
Gm6288-201ENSMUST00000100778 Nlrp6Q91WS2 869 aa11.66□□□□□ -0.54
Gm6288-201ENSMUST00000100778 Ildr2B5TVM2 661 aa11.65□□□□□ -0.54
Gm6288-201ENSMUST00000100778 AcrbpQ3V140 540 aa11.59□□□□□ -0.55
Gm6288-201ENSMUST00000100778 Znf703P0CL69 594 aa11.57□□□□□ -0.56
Gm6288-201ENSMUST00000100778 Cdca7Q9D0M2 382 aa11.56□□□□□ -0.56
Gm6288-201ENSMUST00000100778 Bach1P97302 739 aa11.5□□□□□ -0.57
Gm6288-201ENSMUST00000100778 Pde4cQ3UEI1 686 aa11.46□□□□□ -0.57
Gm6288-201ENSMUST00000100778 Ehmt2Q9Z148 1263 aaKnown RBP11.45□□□□□ -0.58
Gm6288-201ENSMUST00000100778 Prm3Q62100 101 aa11.36□□□□□ -0.59
Gm6288-201ENSMUST00000100778 Rtn4Q99P72 1162 aaKnown RBP11.34□□□□□ -0.59
Gm6288-201ENSMUST00000100778 WdpcpQ8C456 722 aa11.33□□□□□ -0.6
Gm6288-201ENSMUST00000100778 Sox12Q04890 314 aa11.29□□□□□ -0.6
Gm6288-201ENSMUST00000100778 Npm2Q80W85 207 aa11.24□□□□□ -0.61
Gm6288-201ENSMUST00000100778 Tshz2Q68FE9 1030 aa11.22□□□□□ -0.61
Gm6288-201ENSMUST00000100778 C1qtnf12Q8R2Z0 308 aa11.22□□□□□ -0.61
Gm6288-201ENSMUST00000100778 MyclP10166 368 aa11.18□□□□□ -0.62
Gm6288-201ENSMUST00000100778 Riok3Q9DBU3 519 aaKnown RBP11.17□□□□□ -0.62
Gm6288-201ENSMUST00000100778 Styxl1Q9DAR2 321 aa11.06□□□□□ -0.64
Gm6288-201ENSMUST00000100778 Prr29B1ARI9 187 aa10.97□□□□□ -0.65
Gm6288-201ENSMUST00000100778 Trim41Q5NCC3 630 aa10.96□□□□□ -0.65
Gm6288-201ENSMUST00000100778 Kcnn1Q9EQR3 537 aa10.95□□□□□ -0.66
Gm6288-201ENSMUST00000100778 Ifnlr1Q8CGK5 535 aa10.92□□□□□ -0.66
Gm6288-201ENSMUST00000100778 G430095P16RikE9Q913 147 aa10.9□□□□□ -0.67
Gm6288-201ENSMUST00000100778 Ms4a5Q810P8 197 aa10.89□□□□□ -0.67
Gm6288-201ENSMUST00000100778 Ecm2Q5FW85 670 aa10.88□□□□□ -0.67
Gm6288-201ENSMUST00000100778 Gm35339A0A140LHH9 1649 aa10.86□□□□□ -0.67
Gm6288-201ENSMUST00000100778 NischQ80TM9 1593 aa10.85□□□□□ -0.67
Gm6288-201ENSMUST00000100778 Prdm10Q3UTQ7 1184 aa10.79□□□□□ -0.68
Gm6288-201ENSMUST00000100778 Evx2P49749 475 aa10.69□□□□□ -0.7
Gm6288-201ENSMUST00000100778 Egfem1Q8C088 590 aa10.67□□□□□ -0.7
Gm6288-201ENSMUST00000100778 Zbtb7aO88939 569 aaKnown RBP10.65□□□□□ -0.7
Gm6288-201ENSMUST00000100778 Grwd1Q810D6 446 aaKnown RBP10.63□□□□□ -0.71
Gm6288-201ENSMUST00000100778 Zbtb12Q9Z150 459 aa10.62□□□□□ -0.71
Gm6288-201ENSMUST00000100778 Tcf3P15806 651 aa10.58□□□□□ -0.72
Gm6288-201ENSMUST00000100778 Abcc9P70170 1546 aa10.58□□□□□ -0.72
Gm6288-201ENSMUST00000100778 MpndQ3TV65 487 aa10.57□□□□□ -0.72
Gm6288-201ENSMUST00000100778 Clcn6O35454 870 aa10.55□□□□□ -0.72
Gm6288-201ENSMUST00000100778 Krtap4-1Q3UUY3 169 aa10.54□□□□□ -0.72
Gm6288-201ENSMUST00000100778 Fbln2P37889 1221 aa10.53□□□□□ -0.72
Gm6288-201ENSMUST00000100778 Pip4p2Q9CZX7 257 aa10.52□□□□□ -0.72
Gm6288-201ENSMUST00000100778 Gtpbp6Q3U6U5 514 aa10.49□□□□□ -0.73
Gm6288-201ENSMUST00000100778 Abcb7Q61102 752 aaKnown RBP10.49□□□□□ -0.73
Gm6288-201ENSMUST00000100778 Rnf216P58283 853 aa10.48□□□□□ -0.73
Gm6288-201ENSMUST00000100778 Npm3Q9CPP0 175 aaKnown RBP10.44□□□□□ -0.74
Gm6288-201ENSMUST00000100778 Skida1Q80YR3 822 aa10.39□□□□□ -0.75
Gm6288-201ENSMUST00000100778 CatipB9EKE5 520 aa10.38□□□□□ -0.75
Gm6288-201ENSMUST00000100778 Abcc8B2RUS7 1588 aa10.37□□□□□ -0.75
Gm6288-201ENSMUST00000100778 Nkx1-1G3UXB3 402 aa10.36□□□□□ -0.75
Gm6288-201ENSMUST00000100778 Ppp1r37Q8BKR5 712 aa10.34□□□□□ -0.75
Gm6288-201ENSMUST00000100778 Kank3Q9Z1P7 791 aa10.26□□□□□ -0.77
Gm6288-201ENSMUST00000100778 Foxp4Q9DBY0 795 aaKnown RBP10.22□□□□□ -0.77
Gm6288-201ENSMUST00000100778 ArntlQ9WTL8 632 aa10.16□□□□□ -0.78
Gm6288-201ENSMUST00000100778 Lhx8O35652 367 aa10.12□□□□□ -0.79
Gm6288-201ENSMUST00000100778 Lrrc43Q3V0L5 667 aa10.11□□□□□ -0.79
Gm6288-201ENSMUST00000100778 Spock2Q9ER58 423 aa10.11□□□□□ -0.79
Gm6288-201ENSMUST00000100778 Ppp6r1Q7TSI3 856 aa10.08□□□□□ -0.8
Gm6288-201ENSMUST00000100778 Jarid2Q62315 1234 aa10.07□□□□□ -0.8
Gm6288-201ENSMUST00000100778 Taok2Q6ZQ29 1240 aa10.06□□□□□ -0.8
Gm6288-201ENSMUST00000100778 MycnP03966 462 aaKnown RBP10.05□□□□□ -0.8
Gm6288-201ENSMUST00000100778 Arid3aQ62431 601 aa10.03□□□□□ -0.8
Gm6288-201ENSMUST00000100778 Prdm16A2A935 1275 aa10.01□□□□□ -0.81
Gm6288-201ENSMUST00000100778 Skap1Q3UUV5 355 aa9.99□□□□□ -0.81
Gm6288-201ENSMUST00000100778 Hdac5Q9Z2V6 1113 aa9.99□□□□□ -0.81
Gm6288-201ENSMUST00000100778 Zbtb22Q9Z0G7 638 aa9.94□□□□□ -0.82
Gm6288-201ENSMUST00000100778 Slc24a1Q91WD8 1130 aa9.91□□□□□ -0.82
Gm6288-201ENSMUST00000100778 Ferd3lQ923Z4 168 aa9.89□□□□□ -0.83
Gm6288-201ENSMUST00000100778 Hnrnpul2Q00PI9 745 aaKnown RBP9.88□□□□□ -0.83
Gm6288-201ENSMUST00000100778 Fxr2Q9WVR4 673 aaKnown RBP9.88□□□□□ -0.83
Gm6288-201ENSMUST00000100778 Gm11555B1AQ89 175 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms