RNA–Protein interactions for RNA: ENSMUST00000073127.13

Ncapd3-201, Transcript of Condensin-2 complex subunit D3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ncapd3, Length 5,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd3-201ENSMUST00000073127 Rhox8Q6VSS7 320 aa21.42■■□□□ 1.02
Ncapd3-201ENSMUST00000073127 Rpgrip1Q9EPQ2 1331 aa19.98■□□□□ 0.79
Ncapd3-201ENSMUST00000073127 Cngb1E1AZ71 1325 aa19.23■□□□□ 0.67
Ncapd3-201ENSMUST00000073127 Las1lA2BE28 776 aaKnown RBP19.17■□□□□ 0.66
Ncapd3-201ENSMUST00000073127 Ehmt2Q9Z148 1263 aaKnown RBP19.15■□□□□ 0.66
Ncapd3-201ENSMUST00000073127 Ccdc136Q3TVA9 1136 aa18.9■□□□□ 0.62
Ncapd3-201ENSMUST00000073127 Wdr66E9Q743 1299 aa18.89■□□□□ 0.61
Ncapd3-201ENSMUST00000073127 Esf1Q3V1V3 845 aaKnown RBP18.89■□□□□ 0.61
Ncapd3-201ENSMUST00000073127 Pelp1Q9DBD5 1123 aaKnown RBP18.85■□□□□ 0.61
Ncapd3-201ENSMUST00000073127 Trim41Q5NCC3 630 aa18.71■□□□□ 0.59
Ncapd3-201ENSMUST00000073127 Ube2uB1AUC4 352 aa18.66■□□□□ 0.58
Ncapd3-201ENSMUST00000073127 Zeb1Q64318 1117 aa18.61■□□□□ 0.57
Ncapd3-201ENSMUST00000073127 Gab3Q8BSM5 595 aa18.58■□□□□ 0.57
Ncapd3-201ENSMUST00000073127 NischQ80TM9 1593 aa18.58■□□□□ 0.56
Ncapd3-201ENSMUST00000073127 Npm2Q80W85 207 aa18.55■□□□□ 0.56
Ncapd3-201ENSMUST00000073127 Myt1lP97500 1187 aa18.32■□□□□ 0.52
Ncapd3-201ENSMUST00000073127 Acin1Q9JIX8 1338 aaKnown RBP18.29■□□□□ 0.52
Ncapd3-201ENSMUST00000073127 NefmP08553 848 aa18.25■□□□□ 0.51
Ncapd3-201ENSMUST00000073127 CenpbP27790 599 aa18.21■□□□□ 0.51
Ncapd3-201ENSMUST00000073127 Stra8P70278 393 aa18.16■□□□□ 0.5
Ncapd3-201ENSMUST00000073127 Ccdc180J3QNE4 1664 aa18.09■□□□□ 0.49
Ncapd3-201ENSMUST00000073127 UbtfP25976 765 aaKnown RBP18■□□□□ 0.47
Ncapd3-201ENSMUST00000073127 Rtl1Q7M732 1744 aa17.93■□□□□ 0.46
Ncapd3-201ENSMUST00000073127 HrcG5E8J6 738 aa17.91■□□□□ 0.46
Ncapd3-201ENSMUST00000073127 Amer1Q7TS75 1132 aa17.89■□□□□ 0.45
Ncapd3-201ENSMUST00000073127 Slc24a1Q91WD8 1130 aa17.75■□□□□ 0.43
Ncapd3-201ENSMUST00000073127 Cdk11bP24788 784 aaKnown RBP17.72■□□□□ 0.43
Ncapd3-201ENSMUST00000073127 Tnnt3Q9QZ47 272 aa17.63■□□□□ 0.41
Ncapd3-201ENSMUST00000073127 Anp32bQ9EST5 272 aaKnown RBP17.59■□□□□ 0.41
Ncapd3-201ENSMUST00000073127 Myt1Q8CFC2 1127 aa17.59■□□□□ 0.41
Ncapd3-201ENSMUST00000073127 Il27Q8K3I6 234 aa17.58■□□□□ 0.4
Ncapd3-201ENSMUST00000073127 NrdcQ8BHG1 1161 aa17.55■□□□□ 0.4
Ncapd3-201ENSMUST00000073127 Pcgf6Q99NA9 353 aa17.53■□□□□ 0.4
Ncapd3-201ENSMUST00000073127 Zcchc6Q5BLK4 1491 aaKnown RBP17.47■□□□□ 0.39
Ncapd3-201ENSMUST00000073127 Nop58Q6DFW4 536 aaKnown RBP17.47■□□□□ 0.39
Ncapd3-201ENSMUST00000073127 Fam50aQ9WV03 339 aaKnown RBP17.46■□□□□ 0.39
Ncapd3-201ENSMUST00000073127 NeflP08551 543 aa17.45■□□□□ 0.38
Ncapd3-201ENSMUST00000073127 NclP09405 707 aaKnown RBP17.45■□□□□ 0.38
Ncapd3-201ENSMUST00000073127 4930567H17RikQ3V0K5 233 aa17.39■□□□□ 0.37
Ncapd3-201ENSMUST00000073127 Ap3b1Q9Z1T1 1105 aa17.37■□□□□ 0.37
Ncapd3-201ENSMUST00000073127 4933416C03RikQ3V063 378 aa17.36■□□□□ 0.37
Ncapd3-201ENSMUST00000073127 TonslQ6NZL6 1363 aa17.34■□□□□ 0.37
Ncapd3-201ENSMUST00000073127 Neurod1Q60867 357 aa17.33■□□□□ 0.36
Ncapd3-201ENSMUST00000073127 Ttbk1Q6PCN3 1308 aa17.29■□□□□ 0.36
Ncapd3-201ENSMUST00000073127 Os9Q8K2C7 672 aa17.27■□□□□ 0.36
Ncapd3-201ENSMUST00000073127 Eif5bQ05D44 1216 aaKnown RBP17.26■□□□□ 0.35
Ncapd3-201ENSMUST00000073127 Abcc9P70170 1546 aa17.25■□□□□ 0.35
Ncapd3-201ENSMUST00000073127 Rtl5Q5DTT4 599 aa17.24■□□□□ 0.35
Ncapd3-201ENSMUST00000073127 Supt5hO55201 1082 aaKnown RBP17.18■□□□□ 0.34
Ncapd3-201ENSMUST00000073127 Mier1Q5UAK0 511 aa17.12■□□□□ 0.33
Ncapd3-201ENSMUST00000073127 Ppargc1bQ8VHJ7 1014 aa17.08■□□□□ 0.32
Ncapd3-201ENSMUST00000073127 Gm35339A0A140LHH9 1649 aa17.02■□□□□ 0.31
Ncapd3-201ENSMUST00000073127 ClspnQ80YR7 1315 aa17■□□□□ 0.31
Ncapd3-201ENSMUST00000073127 Npm1Q61937 292 aaKnown RBP16.93■□□□□ 0.3
Ncapd3-201ENSMUST00000073127 Anp32aO35381 247 aa16.9■□□□□ 0.3
Ncapd3-201ENSMUST00000073127 Lmod2Q3UHZ5 550 aa16.86■□□□□ 0.29
Ncapd3-201ENSMUST00000073127 Plekhg3Q4VAC9 1341 aa16.85■□□□□ 0.29
Ncapd3-201ENSMUST00000073127 Hdac5Q9Z2V6 1113 aa16.8■□□□□ 0.28
Ncapd3-201ENSMUST00000073127 Abcc8B2RUS7 1588 aa16.79■□□□□ 0.28
Ncapd3-201ENSMUST00000073127 Hnrnpul2Q00PI9 745 aaKnown RBP16.77■□□□□ 0.28
Ncapd3-201ENSMUST00000073127 Zbtb7cQ8VCZ7 619 aa16.76■□□□□ 0.27
Ncapd3-201ENSMUST00000073127 Brd4Q9ESU6 1400 aaKnown RBP16.75■□□□□ 0.27
Ncapd3-201ENSMUST00000073127 Nlrp6Q91WS2 869 aa16.73■□□□□ 0.27
Ncapd3-201ENSMUST00000073127 Dcaf1Q80TR8 1506 aa16.7■□□□□ 0.26
Ncapd3-201ENSMUST00000073127 Gm13697A2AK42 830 aa16.7■□□□□ 0.26
Ncapd3-201ENSMUST00000073127 Cep164Q5DU05 1446 aa16.68■□□□□ 0.26
Ncapd3-201ENSMUST00000073127 Ccer2J3QPU5 274 aa16.68■□□□□ 0.26
Ncapd3-201ENSMUST00000073127 DaxxO35613 739 aa16.67■□□□□ 0.26
Ncapd3-201ENSMUST00000073127 Clip1Q922J3 1391 aa16.66■□□□□ 0.26
Ncapd3-201ENSMUST00000073127 Erich6D3Z6S9 713 aa16.61■□□□□ 0.25
Ncapd3-201ENSMUST00000073127 Anks4bQ8K3X6 423 aa16.58■□□□□ 0.24
Ncapd3-201ENSMUST00000073127 Atp1b4Q99ME6 356 aa16.56■□□□□ 0.24
Ncapd3-201ENSMUST00000073127 Zbtb4Q5F293 982 aa16.55■□□□□ 0.24
Ncapd3-201ENSMUST00000073127 DiexfQ8BTT6 772 aaKnown RBP16.53■□□□□ 0.24
Ncapd3-201ENSMUST00000073127 Eid3Q3V124 375 aa16.53■□□□□ 0.24
Ncapd3-201ENSMUST00000073127 Chic1Q8CBW7 227 aa16.53■□□□□ 0.24
Ncapd3-201ENSMUST00000073127 Polr3glQ8R0C0 218 aa16.52■□□□□ 0.23
Ncapd3-201ENSMUST00000073127 Upf2A2AT37 1269 aaKnown RBP16.51■□□□□ 0.23
Ncapd3-201ENSMUST00000073127 Sall2Q9QX96 1004 aa16.51■□□□□ 0.23
Ncapd3-201ENSMUST00000073127 Mapk8ip2Q9ERE9 830 aa16.49■□□□□ 0.23
Ncapd3-201ENSMUST00000073127 Ifnlr1Q8CGK5 535 aa16.49■□□□□ 0.23
Ncapd3-201ENSMUST00000073127 Aplp2Q06335 707 aa16.48■□□□□ 0.23
Ncapd3-201ENSMUST00000073127 Gm13695A2AK44 830 aa16.43■□□□□ 0.22
Ncapd3-201ENSMUST00000073127 Rb1cc1Q9ESK9 1588 aa16.42■□□□□ 0.22
Ncapd3-201ENSMUST00000073127 Calr4Q3TQS0 420 aa16.42■□□□□ 0.22
Ncapd3-201ENSMUST00000073127 Prdm10Q3UTQ7 1184 aa16.41■□□□□ 0.22
Ncapd3-201ENSMUST00000073127 Csrnp3P59055 597 aa16.38■□□□□ 0.21
Ncapd3-201ENSMUST00000073127 Fkbp15Q6P9Q6 1216 aaKnown RBP16.35■□□□□ 0.21
Ncapd3-201ENSMUST00000073127 Clstn2Q9ER65 966 aa16.34■□□□□ 0.21
Ncapd3-201ENSMUST00000073127 ArxO35085 564 aa16.33■□□□□ 0.2
Ncapd3-201ENSMUST00000073127 Ppp4r2Q0VGB7 417 aa16.33■□□□□ 0.2
Ncapd3-201ENSMUST00000073127 Gm38655A0A286YDK6 273 aa16.32■□□□□ 0.2
Ncapd3-201ENSMUST00000073127 Wdr43Q6ZQL4 677 aaKnown RBP16.28■□□□□ 0.2
Ncapd3-201ENSMUST00000073127 BlmO88700 1416 aa16.28■□□□□ 0.2
Ncapd3-201ENSMUST00000073127 Mrs2Q5NCE8 434 aa16.26■□□□□ 0.19
Ncapd3-201ENSMUST00000073127 Ubl4bQ9CQ84 188 aa16.25■□□□□ 0.19
Ncapd3-201ENSMUST00000073127 Chic2Q9D9G3 165 aa16.25■□□□□ 0.19
Ncapd3-201ENSMUST00000073127 Ccdc9Q8VC31 543 aaKnown RBP16.23■□□□□ 0.19
Ncapd3-201ENSMUST00000073127 Rad21Q61550 635 aaKnown RBP16.22■□□□□ 0.19
Ncapd3-201ENSMUST00000073127 Setd5Q5XJV7 1441 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms