RNA–Protein interactions for RNA: ENSMUST00000039978.12

Gabpb1-201, Transcript of GA-binding protein subunit beta-1, mousemouse

TSL 1 (best) BASIC

Gene Gabpb1, Length 1,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1-201ENSMUST00000039978 Mapk8ip2Q9ERE9 830 aa22.01■■□□□ 1.11
Gabpb1-201ENSMUST00000039978 Chic1Q8CBW7 227 aa21.67■■□□□ 1.06
Gabpb1-201ENSMUST00000039978 Phf23Q8BSN5 401 aa19.44■□□□□ 0.7
Gabpb1-201ENSMUST00000039978 Gab3Q8BSM5 595 aa18.3■□□□□ 0.52
Gabpb1-201ENSMUST00000039978 Plppr3Q7TPB0 716 aa18.03■□□□□ 0.48
Gabpb1-201ENSMUST00000039978 Senp3Q9EP97 568 aaKnown RBP17.5■□□□□ 0.39
Gabpb1-201ENSMUST00000039978 Fam163aQ8CAA5 168 aa16.63■□□□□ 0.25
Gabpb1-201ENSMUST00000039978 Kcna4Q61423 654 aa15.91■□□□□ 0.14
Gabpb1-201ENSMUST00000039978 Hoxd11P23813 323 aa15.71■□□□□ 0.1
Gabpb1-201ENSMUST00000039978 Trap1aP19473 224 aa15.35■□□□□ 0.05
Gabpb1-201ENSMUST00000039978 Znf219Q6IQX8 726 aa15.2■□□□□ 0.02
Gabpb1-201ENSMUST00000039978 Gm35339A0A140LHH9 1649 aa15.13■□□□□ 0.01
Gabpb1-201ENSMUST00000039978 ArsiQ32KI9 573 aa15.13■□□□□ 0.01
Gabpb1-201ENSMUST00000039978 NischQ80TM9 1593 aa14.78□□□□□ -0.04
Gabpb1-201ENSMUST00000039978 Chrna2Q91X60 512 aa14.65□□□□□ -0.06
Gabpb1-201ENSMUST00000039978 Slc34a2Q9DBP0 697 aa14.65□□□□□ -0.06
Gabpb1-201ENSMUST00000039978 Rsph4aQ8BYM7 716 aa14.6□□□□□ -0.07
Gabpb1-201ENSMUST00000039978 Dnajc5bQ9CQ94 199 aa14.57□□□□□ -0.08
Gabpb1-201ENSMUST00000039978 GapdhsQ64467 440 aa14.53□□□□□ -0.08
Gabpb1-201ENSMUST00000039978 Rimbp2Q80U40 1072 aa14.49□□□□□ -0.09
Gabpb1-201ENSMUST00000039978 Akt1s1Q9D1F4 257 aa14.44□□□□□ -0.1
Gabpb1-201ENSMUST00000039978 Abcc8B2RUS7 1588 aa14.36□□□□□ -0.11
Gabpb1-201ENSMUST00000039978 Abcc9P70170 1546 aa14.3□□□□□ -0.12
Gabpb1-201ENSMUST00000039978 Dmrt2Q8BG36 561 aa14.16□□□□□ -0.14
Gabpb1-201ENSMUST00000039978 ScribQ80U72 1612 aa13.99□□□□□ -0.17
Gabpb1-201ENSMUST00000039978 Atf5O70191 283 aa13.79□□□□□ -0.2
Gabpb1-201ENSMUST00000039978 Hs6st3Q9QYK4 470 aa13.58□□□□□ -0.24
Gabpb1-201ENSMUST00000039978 Znf704Q9ERQ3 566 aa13.57□□□□□ -0.24
Gabpb1-201ENSMUST00000039978 NacadQ5SWP3 1504 aa13.56□□□□□ -0.24
Gabpb1-201ENSMUST00000039978 Slc4a5E9Q3M5 1116 aa13.52□□□□□ -0.24
Gabpb1-201ENSMUST00000039978 Ppp4r2Q0VGB7 417 aa13.52□□□□□ -0.24
Gabpb1-201ENSMUST00000039978 Kdm5dQ62240 1548 aa13.49□□□□□ -0.25
Gabpb1-201ENSMUST00000039978 Bach1P97302 739 aa13.42□□□□□ -0.26
Gabpb1-201ENSMUST00000039978 Sox12Q04890 314 aa13.42□□□□□ -0.26
Gabpb1-201ENSMUST00000039978 Sycp2Q9CUU3 1500 aa13.29□□□□□ -0.28
Gabpb1-201ENSMUST00000039978 Ppargc1bQ8VHJ7 1014 aa13.23□□□□□ -0.29
Gabpb1-201ENSMUST00000039978 Dcaf1Q80TR8 1506 aa13.21□□□□□ -0.3
Gabpb1-201ENSMUST00000039978 BicraF8VPZ9 1578 aa13.1□□□□□ -0.31
Gabpb1-201ENSMUST00000039978 Slc4a1apE9PX68 744 aa13.1□□□□□ -0.31
Gabpb1-201ENSMUST00000039978 Egfem1Q8C088 590 aa12.94□□□□□ -0.34
Gabpb1-201ENSMUST00000039978 WdpcpQ8C456 722 aa12.92□□□□□ -0.34
Gabpb1-201ENSMUST00000039978 Grwd1Q810D6 446 aaKnown RBP12.89□□□□□ -0.35
Gabpb1-201ENSMUST00000039978 Rb1cc1Q9ESK9 1588 aa12.88□□□□□ -0.35
Gabpb1-201ENSMUST00000039978 Zbtb7aO88939 569 aaKnown RBP12.88□□□□□ -0.35
Gabpb1-201ENSMUST00000039978 Cacnb1Q8R3Z5 597 aa12.88□□□□□ -0.35
Gabpb1-201ENSMUST00000039978 Pds5bQ4VA53 1446 aaKnown RBP12.87□□□□□ -0.35
Gabpb1-201ENSMUST00000039978 1700123L14RikQ3V2K7 440 aa12.87□□□□□ -0.35
Gabpb1-201ENSMUST00000039978 Thoc2B1AZI6 1594 aaKnown RBP12.85□□□□□ -0.35
Gabpb1-201ENSMUST00000039978 Ildr2B5TVM2 661 aa12.76□□□□□ -0.37
Gabpb1-201ENSMUST00000039978 Znf703P0CL69 594 aa12.73□□□□□ -0.37
Gabpb1-201ENSMUST00000039978 Baz1aO88379 1555 aa12.69□□□□□ -0.38
Gabpb1-201ENSMUST00000039978 Ccdc180J3QNE4 1664 aa12.69□□□□□ -0.38
Gabpb1-201ENSMUST00000039978 Crybg2B7ZCC2 1516 aa12.68□□□□□ -0.38
Gabpb1-201ENSMUST00000039978 Atad2bE9Q166 1460 aaKnown RBP12.67□□□□□ -0.38
Gabpb1-201ENSMUST00000039978 Ifnlr1Q8CGK5 535 aa12.64□□□□□ -0.39
Gabpb1-201ENSMUST00000039978 Ercc6F8VPZ5 1481 aa12.62□□□□□ -0.39
Gabpb1-201ENSMUST00000039978 Abcb7Q61102 752 aaKnown RBP12.61□□□□□ -0.39
Gabpb1-201ENSMUST00000039978 Cc2d2aQ8CFW7 1633 aa12.6□□□□□ -0.39
Gabpb1-201ENSMUST00000039978 G430095P16RikE9Q913 147 aa12.6□□□□□ -0.39
Gabpb1-201ENSMUST00000039978 Zcchc6Q5BLK4 1491 aaKnown RBP12.52□□□□□ -0.4
Gabpb1-201ENSMUST00000039978 Fam135aQ6NS59 1506 aa12.52□□□□□ -0.4
Gabpb1-201ENSMUST00000039978 Rnf216P58283 853 aa12.5□□□□□ -0.41
Gabpb1-201ENSMUST00000039978 Smarca2Q6DIC0 1577 aa12.49□□□□□ -0.41
Gabpb1-201ENSMUST00000039978 Smarca4Q3TKT4 1613 aaKnown RBP12.48□□□□□ -0.41
Gabpb1-201ENSMUST00000039978 Rhox8Q6VSS7 320 aa12.47□□□□□ -0.41
Gabpb1-201ENSMUST00000039978 Baz1bQ9Z277 1479 aa12.47□□□□□ -0.41
Gabpb1-201ENSMUST00000039978 Prr29B1ARI9 187 aa12.45□□□□□ -0.42
Gabpb1-201ENSMUST00000039978 Kcnn1Q9EQR3 537 aa12.45□□□□□ -0.42
Gabpb1-201ENSMUST00000039978 Iqgap2Q3UQ44 1575 aa12.43□□□□□ -0.42
Gabpb1-201ENSMUST00000039978 Wdr62Q3U3T8 1523 aa12.38□□□□□ -0.43
Gabpb1-201ENSMUST00000039978 C1qtnf12Q8R2Z0 308 aa12.37□□□□□ -0.43
Gabpb1-201ENSMUST00000039978 Nkx1-1G3UXB3 402 aa12.35□□□□□ -0.43
Gabpb1-201ENSMUST00000039978 Phldb1Q6PDH0 1371 aaKnown RBP12.34□□□□□ -0.43
Gabpb1-201ENSMUST00000039978 Zbtb12Q9Z150 459 aa12.34□□□□□ -0.43
Gabpb1-201ENSMUST00000039978 Gtpbp6Q3U6U5 514 aa12.32□□□□□ -0.44
Gabpb1-201ENSMUST00000039978 Frmpd1A2AKB4 1549 aa12.32□□□□□ -0.44
Gabpb1-201ENSMUST00000039978 Cecr2E9Q2Z1 1453 aa12.28□□□□□ -0.44
Gabpb1-201ENSMUST00000039978 Cdca7Q9D0M2 382 aa12.25□□□□□ -0.45
Gabpb1-201ENSMUST00000039978 Mrc2Q64449 1479 aa12.22□□□□□ -0.45
Gabpb1-201ENSMUST00000039978 Ubl4bQ9CQ84 188 aa12.19□□□□□ -0.46
Gabpb1-201ENSMUST00000039978 Pip4p2Q9CZX7 257 aa12.17□□□□□ -0.46
Gabpb1-201ENSMUST00000039978 Ms4a5Q810P8 197 aa12.14□□□□□ -0.47
Gabpb1-201ENSMUST00000039978 Dnajc5P60904 198 aa12.14□□□□□ -0.47
Gabpb1-201ENSMUST00000039978 Unc13aQ4KUS2 1712 aa12.12□□□□□ -0.47
Gabpb1-201ENSMUST00000039978 Clcn6O35454 870 aa12.06□□□□□ -0.48
Gabpb1-201ENSMUST00000039978 Kank3Q9Z1P7 791 aa12.05□□□□□ -0.48
Gabpb1-201ENSMUST00000039978 Cttnbp2B9EJA2 1648 aa12.04□□□□□ -0.48
Gabpb1-201ENSMUST00000039978 Trim41Q5NCC3 630 aa12□□□□□ -0.49
Gabpb1-201ENSMUST00000039978 CftrP26361 1476 aa12□□□□□ -0.49
Gabpb1-201ENSMUST00000039978 Pitpnm1O35954 1243 aa11.98□□□□□ -0.49
Gabpb1-201ENSMUST00000039978 Synj1Q8CHC4 1574 aa11.95□□□□□ -0.5
Gabpb1-201ENSMUST00000039978 Lrriq1Q0P5X1 1673 aa11.95□□□□□ -0.5
Gabpb1-201ENSMUST00000039978 Brd4Q9ESU6 1400 aaKnown RBP11.93□□□□□ -0.5
Gabpb1-201ENSMUST00000039978 Rsf1E9PWW9 1441 aaKnown RBP11.93□□□□□ -0.5
Gabpb1-201ENSMUST00000039978 Trim35Q8C006 501 aa11.89□□□□□ -0.51
Gabpb1-201ENSMUST00000039978 Rtl1Q7M732 1744 aa11.89□□□□□ -0.51
Gabpb1-201ENSMUST00000039978 Cux2P70298 1426 aa11.85□□□□□ -0.51
Gabpb1-201ENSMUST00000039978 Kif21aQ9QXL2 1672 aa11.83□□□□□ -0.52
Gabpb1-201ENSMUST00000039978 Eif4g3Q80XI3 1579 aaKnown RBP11.82□□□□□ -0.52
Gabpb1-201ENSMUST00000039978 Shroom2A2ALU4 1481 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms