RNA–Protein interactions for RNA: ENSMUST00000039568.10

Pcdh8-201, Transcript of Protocadherin-8, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh8, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8-201ENSMUST00000039568 Rhox8Q6VSS7 320 aa23.46■■□□□ 1.35
Pcdh8-201ENSMUST00000039568 NischQ80TM9 1593 aa22.79■■□□□ 1.24
Pcdh8-201ENSMUST00000039568 Abcc9P70170 1546 aa22.01■■□□□ 1.11
Pcdh8-201ENSMUST00000039568 Rpgrip1Q9EPQ2 1331 aa21.65■■□□□ 1.06
Pcdh8-201ENSMUST00000039568 Gm35339A0A140LHH9 1649 aa21.56■■□□□ 1.04
Pcdh8-201ENSMUST00000039568 Ehmt2Q9Z148 1263 aaKnown RBP21.49■■□□□ 1.03
Pcdh8-201ENSMUST00000039568 Ccdc136Q3TVA9 1136 aa21.44■■□□□ 1.02
Pcdh8-201ENSMUST00000039568 Abcc8B2RUS7 1588 aa21.35■■□□□ 1.01
Pcdh8-201ENSMUST00000039568 Ccdc180J3QNE4 1664 aa21.17■□□□□ 0.98
Pcdh8-201ENSMUST00000039568 Rtl1Q7M732 1744 aa21.14■□□□□ 0.97
Pcdh8-201ENSMUST00000039568 Esf1Q3V1V3 845 aaKnown RBP21.08■□□□□ 0.96
Pcdh8-201ENSMUST00000039568 Acin1Q9JIX8 1338 aaKnown RBP20.9■□□□□ 0.94
Pcdh8-201ENSMUST00000039568 Cngb1E1AZ71 1325 aa20.81■□□□□ 0.92
Pcdh8-201ENSMUST00000039568 Trim41Q5NCC3 630 aa20.79■□□□□ 0.92
Pcdh8-201ENSMUST00000039568 HrcG5E8J6 738 aa20.67■□□□□ 0.9
Pcdh8-201ENSMUST00000039568 Zcchc6Q5BLK4 1491 aaKnown RBP20.63■□□□□ 0.89
Pcdh8-201ENSMUST00000039568 Gab3Q8BSM5 595 aa20.5■□□□□ 0.87
Pcdh8-201ENSMUST00000039568 Il27Q8K3I6 234 aa20.34■□□□□ 0.85
Pcdh8-201ENSMUST00000039568 Zeb1Q64318 1117 aa20.33■□□□□ 0.84
Pcdh8-201ENSMUST00000039568 Pcgf6Q99NA9 353 aa20.31■□□□□ 0.84
Pcdh8-201ENSMUST00000039568 NacadQ5SWP3 1504 aa20.13■□□□□ 0.81
Pcdh8-201ENSMUST00000039568 Npm2Q80W85 207 aa20.08■□□□□ 0.81
Pcdh8-201ENSMUST00000039568 Wdr66E9Q743 1299 aa20■□□□□ 0.79
Pcdh8-201ENSMUST00000039568 Las1lA2BE28 776 aaKnown RBP20■□□□□ 0.79
Pcdh8-201ENSMUST00000039568 Myt1lP97500 1187 aa19.99■□□□□ 0.79
Pcdh8-201ENSMUST00000039568 Dcaf1Q80TR8 1506 aa19.99■□□□□ 0.79
Pcdh8-201ENSMUST00000039568 Kdm5dQ62240 1548 aa19.97■□□□□ 0.79
Pcdh8-201ENSMUST00000039568 Supt5hO55201 1082 aaKnown RBP19.97■□□□□ 0.79
Pcdh8-201ENSMUST00000039568 Rb1cc1Q9ESK9 1588 aa19.94■□□□□ 0.78
Pcdh8-201ENSMUST00000039568 NefmP08553 848 aa19.92■□□□□ 0.78
Pcdh8-201ENSMUST00000039568 ScribQ80U72 1612 aa19.83■□□□□ 0.76
Pcdh8-201ENSMUST00000039568 UbtfP25976 765 aaKnown RBP19.8■□□□□ 0.76
Pcdh8-201ENSMUST00000039568 Ubl4bQ9CQ84 188 aa19.73■□□□□ 0.75
Pcdh8-201ENSMUST00000039568 Cep164Q5DU05 1446 aa19.68■□□□□ 0.74
Pcdh8-201ENSMUST00000039568 Npm1Q61937 292 aaKnown RBP19.67■□□□□ 0.74
Pcdh8-201ENSMUST00000039568 Mier1Q5UAK0 511 aa19.64■□□□□ 0.74
Pcdh8-201ENSMUST00000039568 Chic1Q8CBW7 227 aa19.63■□□□□ 0.73
Pcdh8-201ENSMUST00000039568 Baz1aO88379 1555 aa19.59■□□□□ 0.73
Pcdh8-201ENSMUST00000039568 DiexfQ8BTT6 772 aaKnown RBP19.47■□□□□ 0.71
Pcdh8-201ENSMUST00000039568 Sycp2Q9CUU3 1500 aa19.46■□□□□ 0.71
Pcdh8-201ENSMUST00000039568 Neurod1Q60867 357 aa19.43■□□□□ 0.7
Pcdh8-201ENSMUST00000039568 Ppargc1bQ8VHJ7 1014 aa19.41■□□□□ 0.7
Pcdh8-201ENSMUST00000039568 CenpbP27790 599 aa19.39■□□□□ 0.69
Pcdh8-201ENSMUST00000039568 Brd4Q9ESU6 1400 aaKnown RBP19.36■□□□□ 0.69
Pcdh8-201ENSMUST00000039568 Cdk11bP24788 784 aaKnown RBP19.34■□□□□ 0.69
Pcdh8-201ENSMUST00000039568 Sall2Q9QX96 1004 aa19.33■□□□□ 0.69
Pcdh8-201ENSMUST00000039568 Ube2uB1AUC4 352 aa19.31■□□□□ 0.68
Pcdh8-201ENSMUST00000039568 Ap3b1Q9Z1T1 1105 aa19.31■□□□□ 0.68
Pcdh8-201ENSMUST00000039568 Nop58Q6DFW4 536 aaKnown RBP19.27■□□□□ 0.67
Pcdh8-201ENSMUST00000039568 Ifnlr1Q8CGK5 535 aa19.27■□□□□ 0.67
Pcdh8-201ENSMUST00000039568 Rsf1E9PWW9 1441 aaKnown RBP19.22■□□□□ 0.67
Pcdh8-201ENSMUST00000039568 Ercc6F8VPZ5 1481 aa19.22■□□□□ 0.67
Pcdh8-201ENSMUST00000039568 Pds5bQ4VA53 1446 aaKnown RBP19.2■□□□□ 0.66
Pcdh8-201ENSMUST00000039568 Pelp1Q9DBD5 1123 aaKnown RBP19.17■□□□□ 0.66
Pcdh8-201ENSMUST00000039568 TonslQ6NZL6 1363 aa19.15■□□□□ 0.66
Pcdh8-201ENSMUST00000039568 Kif15Q6P9L6 1387 aa19.11■□□□□ 0.65
Pcdh8-201ENSMUST00000039568 Plekhg3Q4VAC9 1341 aa19.1■□□□□ 0.65
Pcdh8-201ENSMUST00000039568 Golga3P55937 1487 aa19.08■□□□□ 0.64
Pcdh8-201ENSMUST00000039568 Fkbp15Q6P9Q6 1216 aaKnown RBP19.08■□□□□ 0.64
Pcdh8-201ENSMUST00000039568 Myt1Q8CFC2 1127 aa19.06■□□□□ 0.64
Pcdh8-201ENSMUST00000039568 Dnajc5bQ9CQ94 199 aa19.06■□□□□ 0.64
Pcdh8-201ENSMUST00000039568 Cecr2E9Q2Z1 1453 aa19.06■□□□□ 0.64
Pcdh8-201ENSMUST00000039568 ClspnQ80YR7 1315 aa19.05■□□□□ 0.64
Pcdh8-201ENSMUST00000039568 Ccdc88bQ4QRL3 1481 aa19.01■□□□□ 0.63
Pcdh8-201ENSMUST00000039568 Anks4bQ8K3X6 423 aa18.98■□□□□ 0.63
Pcdh8-201ENSMUST00000039568 Csrnp3P59055 597 aa18.95■□□□□ 0.62
Pcdh8-201ENSMUST00000039568 Plppr3Q7TPB0 716 aa18.94■□□□□ 0.62
Pcdh8-201ENSMUST00000039568 Smarca2Q6DIC0 1577 aa18.93■□□□□ 0.62
Pcdh8-201ENSMUST00000039568 Amer1Q7TS75 1132 aa18.92■□□□□ 0.62
Pcdh8-201ENSMUST00000039568 Aebp2Q9Z248 504 aaKnown RBP18.92■□□□□ 0.62
Pcdh8-201ENSMUST00000039568 Lmod2Q3UHZ5 550 aa18.9■□□□□ 0.62
Pcdh8-201ENSMUST00000039568 Fam50aQ9WV03 339 aaKnown RBP18.9■□□□□ 0.62
Pcdh8-201ENSMUST00000039568 Clip1Q922J3 1391 aa18.88■□□□□ 0.61
Pcdh8-201ENSMUST00000039568 Crybg2B7ZCC2 1516 aa18.87■□□□□ 0.61
Pcdh8-201ENSMUST00000039568 Atad2bE9Q166 1460 aaKnown RBP18.87■□□□□ 0.61
Pcdh8-201ENSMUST00000039568 1700123L14RikQ3V2K7 440 aa18.85■□□□□ 0.61
Pcdh8-201ENSMUST00000039568 Eid3Q3V124 375 aa18.84■□□□□ 0.61
Pcdh8-201ENSMUST00000039568 Ttbk1Q6PCN3 1308 aa18.82■□□□□ 0.6
Pcdh8-201ENSMUST00000039568 NclP09405 707 aaKnown RBP18.81■□□□□ 0.6
Pcdh8-201ENSMUST00000039568 Slc24a1Q91WD8 1130 aa18.8■□□□□ 0.6
Pcdh8-201ENSMUST00000039568 Stra8P70278 393 aa18.78■□□□□ 0.6
Pcdh8-201ENSMUST00000039568 Gm38655A0A286YDK6 273 aa18.77■□□□□ 0.59
Pcdh8-201ENSMUST00000039568 Bcl11aQ9QYE3 773 aa18.74■□□□□ 0.59
Pcdh8-201ENSMUST00000039568 Phldb1Q6PDH0 1371 aaKnown RBP18.73■□□□□ 0.59
Pcdh8-201ENSMUST00000039568 Zbtb7cQ8VCZ7 619 aa18.72■□□□□ 0.59
Pcdh8-201ENSMUST00000039568 Tnnt3Q9QZ47 272 aa18.71■□□□□ 0.59
Pcdh8-201ENSMUST00000039568 Mapk8ip2Q9ERE9 830 aa18.7■□□□□ 0.58
Pcdh8-201ENSMUST00000039568 BicraF8VPZ9 1578 aa18.69■□□□□ 0.58
Pcdh8-201ENSMUST00000039568 CftrP26361 1476 aa18.67■□□□□ 0.58
Pcdh8-201ENSMUST00000039568 Cux2P70298 1426 aa18.64■□□□□ 0.57
Pcdh8-201ENSMUST00000039568 Aplp2Q06335 707 aa18.62■□□□□ 0.57
Pcdh8-201ENSMUST00000039568 Smarca4Q3TKT4 1613 aaKnown RBP18.62■□□□□ 0.57
Pcdh8-201ENSMUST00000039568 Synj1Q8CHC4 1574 aa18.59■□□□□ 0.57
Pcdh8-201ENSMUST00000039568 Ccdc18Q640L5 1455 aa18.59■□□□□ 0.57
Pcdh8-201ENSMUST00000039568 Iqgap2Q3UQ44 1575 aa18.54■□□□□ 0.56
Pcdh8-201ENSMUST00000039568 Cep162Q6ZQ06 1403 aa18.52■□□□□ 0.55
Pcdh8-201ENSMUST00000039568 Arhgap27A2AB59 869 aa18.52■□□□□ 0.55
Pcdh8-201ENSMUST00000039568 Setd5Q5XJV7 1441 aa18.45■□□□□ 0.54
Pcdh8-201ENSMUST00000039568 Fmn1Q05860 1466 aa18.43■□□□□ 0.54
Pcdh8-201ENSMUST00000039568 Eif5bQ05D44 1216 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 173.6 ms