RNA–Protein interactions for RNA: ENSMUST00000036904.6

Rnf139-201, Transcript of E3 ubiquitin-protein ligase RNF139, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf139, Length 4,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139-201ENSMUST00000036904 Rhox8Q6VSS7 320 aa27.87■■■□□ 2.05
Rnf139-201ENSMUST00000036904 NischQ80TM9 1593 aa25.81■■□□□ 1.72
Rnf139-201ENSMUST00000036904 Ehmt2Q9Z148 1263 aaKnown RBP25.63■■□□□ 1.69
Rnf139-201ENSMUST00000036904 Ccdc136Q3TVA9 1136 aa25.32■■□□□ 1.64
Rnf139-201ENSMUST00000036904 Rpgrip1Q9EPQ2 1331 aa24.75■■□□□ 1.55
Rnf139-201ENSMUST00000036904 Cngb1E1AZ71 1325 aa24.51■■□□□ 1.51
Rnf139-201ENSMUST00000036904 Gab3Q8BSM5 595 aa24.51■■□□□ 1.51
Rnf139-201ENSMUST00000036904 Trim41Q5NCC3 630 aa24.45■■□□□ 1.5
Rnf139-201ENSMUST00000036904 Abcc9P70170 1546 aa24.31■■□□□ 1.48
Rnf139-201ENSMUST00000036904 Esf1Q3V1V3 845 aaKnown RBP24.28■■□□□ 1.48
Rnf139-201ENSMUST00000036904 Zeb1Q64318 1117 aa24.1■■□□□ 1.45
Rnf139-201ENSMUST00000036904 Acin1Q9JIX8 1338 aaKnown RBP23.97■■□□□ 1.43
Rnf139-201ENSMUST00000036904 Abcc8B2RUS7 1588 aa23.85■■□□□ 1.41
Rnf139-201ENSMUST00000036904 Wdr66E9Q743 1299 aa23.82■■□□□ 1.4
Rnf139-201ENSMUST00000036904 Myt1lP97500 1187 aa23.8■■□□□ 1.4
Rnf139-201ENSMUST00000036904 Ccdc180J3QNE4 1664 aa23.77■■□□□ 1.4
Rnf139-201ENSMUST00000036904 HrcG5E8J6 738 aa23.68■■□□□ 1.38
Rnf139-201ENSMUST00000036904 Npm2Q80W85 207 aa23.63■■□□□ 1.37
Rnf139-201ENSMUST00000036904 UbtfP25976 765 aaKnown RBP23.52■■□□□ 1.36
Rnf139-201ENSMUST00000036904 Las1lA2BE28 776 aaKnown RBP23.52■■□□□ 1.36
Rnf139-201ENSMUST00000036904 Zcchc6Q5BLK4 1491 aaKnown RBP23.51■■□□□ 1.35
Rnf139-201ENSMUST00000036904 Gm35339A0A140LHH9 1649 aa23.5■■□□□ 1.35
Rnf139-201ENSMUST00000036904 Rtl1Q7M732 1744 aa23.41■■□□□ 1.34
Rnf139-201ENSMUST00000036904 Pcgf6Q99NA9 353 aa23.39■■□□□ 1.33
Rnf139-201ENSMUST00000036904 Ube2uB1AUC4 352 aa23.23■■□□□ 1.31
Rnf139-201ENSMUST00000036904 Ppargc1bQ8VHJ7 1014 aa23.17■■□□□ 1.3
Rnf139-201ENSMUST00000036904 Il27Q8K3I6 234 aa23.13■■□□□ 1.29
Rnf139-201ENSMUST00000036904 Supt5hO55201 1082 aaKnown RBP23.13■■□□□ 1.29
Rnf139-201ENSMUST00000036904 NefmP08553 848 aa23.12■■□□□ 1.29
Rnf139-201ENSMUST00000036904 Ap3b1Q9Z1T1 1105 aa22.89■■□□□ 1.26
Rnf139-201ENSMUST00000036904 Chic1Q8CBW7 227 aa22.87■■□□□ 1.25
Rnf139-201ENSMUST00000036904 Mier1Q5UAK0 511 aa22.86■■□□□ 1.25
Rnf139-201ENSMUST00000036904 Dcaf1Q80TR8 1506 aa22.69■■□□□ 1.22
Rnf139-201ENSMUST00000036904 Rb1cc1Q9ESK9 1588 aa22.65■■□□□ 1.22
Rnf139-201ENSMUST00000036904 Slc24a1Q91WD8 1130 aa22.63■■□□□ 1.21
Rnf139-201ENSMUST00000036904 Fam50aQ9WV03 339 aaKnown RBP22.58■■□□□ 1.21
Rnf139-201ENSMUST00000036904 Plekhg3Q4VAC9 1341 aa22.57■■□□□ 1.2
Rnf139-201ENSMUST00000036904 Cdk11bP24788 784 aaKnown RBP22.56■■□□□ 1.2
Rnf139-201ENSMUST00000036904 Nop58Q6DFW4 536 aaKnown RBP22.49■■□□□ 1.19
Rnf139-201ENSMUST00000036904 Cep164Q5DU05 1446 aa22.42■■□□□ 1.18
Rnf139-201ENSMUST00000036904 Sall2Q9QX96 1004 aa22.37■■□□□ 1.17
Rnf139-201ENSMUST00000036904 TonslQ6NZL6 1363 aa22.36■■□□□ 1.17
Rnf139-201ENSMUST00000036904 Neurod1Q60867 357 aa22.34■■□□□ 1.17
Rnf139-201ENSMUST00000036904 Lmod2Q3UHZ5 550 aa22.33■■□□□ 1.16
Rnf139-201ENSMUST00000036904 Eid3Q3V124 375 aa22.32■■□□□ 1.16
Rnf139-201ENSMUST00000036904 CenpbP27790 599 aa22.32■■□□□ 1.16
Rnf139-201ENSMUST00000036904 NclP09405 707 aaKnown RBP22.31■■□□□ 1.16
Rnf139-201ENSMUST00000036904 Brd4Q9ESU6 1400 aaKnown RBP22.27■■□□□ 1.16
Rnf139-201ENSMUST00000036904 Mapk8ip2Q9ERE9 830 aa22.26■■□□□ 1.15
Rnf139-201ENSMUST00000036904 Baz1aO88379 1555 aa22.12■■□□□ 1.13
Rnf139-201ENSMUST00000036904 NacadQ5SWP3 1504 aa22.09■■□□□ 1.13
Rnf139-201ENSMUST00000036904 Gm38655A0A286YDK6 273 aa22.08■■□□□ 1.13
Rnf139-201ENSMUST00000036904 Clip1Q922J3 1391 aa22.03■■□□□ 1.12
Rnf139-201ENSMUST00000036904 Kdm5dQ62240 1548 aa22.02■■□□□ 1.12
Rnf139-201ENSMUST00000036904 ClspnQ80YR7 1315 aa22.02■■□□□ 1.12
Rnf139-201ENSMUST00000036904 Rsf1E9PWW9 1441 aaKnown RBP22.02■■□□□ 1.12
Rnf139-201ENSMUST00000036904 Stra8P70278 393 aa21.99■■□□□ 1.11
Rnf139-201ENSMUST00000036904 Npm1Q61937 292 aaKnown RBP21.99■■□□□ 1.11
Rnf139-201ENSMUST00000036904 Eif5bQ05D44 1216 aaKnown RBP21.98■■□□□ 1.11
Rnf139-201ENSMUST00000036904 Aebp2Q9Z248 504 aaKnown RBP21.92■■□□□ 1.1
Rnf139-201ENSMUST00000036904 Csrnp3P59055 597 aa21.92■■□□□ 1.1
Rnf139-201ENSMUST00000036904 Pelp1Q9DBD5 1123 aaKnown RBP21.87■■□□□ 1.09
Rnf139-201ENSMUST00000036904 Zbtb7cQ8VCZ7 619 aa21.87■■□□□ 1.09
Rnf139-201ENSMUST00000036904 Golga3P55937 1487 aa21.82■■□□□ 1.08
Rnf139-201ENSMUST00000036904 Ccdc88bQ4QRL3 1481 aa21.78■■□□□ 1.08
Rnf139-201ENSMUST00000036904 NrdcQ8BHG1 1161 aa21.77■■□□□ 1.08
Rnf139-201ENSMUST00000036904 Tnnt3Q9QZ47 272 aa21.7■■□□□ 1.06
Rnf139-201ENSMUST00000036904 Zbtb4Q5F293 982 aa21.69■■□□□ 1.06
Rnf139-201ENSMUST00000036904 Anks4bQ8K3X6 423 aa21.69■■□□□ 1.06
Rnf139-201ENSMUST00000036904 Chic2Q9D9G3 165 aa21.61■■□□□ 1.05
Rnf139-201ENSMUST00000036904 Ttbk1Q6PCN3 1308 aa21.6■■□□□ 1.05
Rnf139-201ENSMUST00000036904 Ubl4bQ9CQ84 188 aa21.59■■□□□ 1.05
Rnf139-201ENSMUST00000036904 BlmO88700 1416 aa21.56■■□□□ 1.04
Rnf139-201ENSMUST00000036904 Fkbp15Q6P9Q6 1216 aaKnown RBP21.54■■□□□ 1.04
Rnf139-201ENSMUST00000036904 ScribQ80U72 1612 aa21.54■■□□□ 1.04
Rnf139-201ENSMUST00000036904 Setd5Q5XJV7 1441 aa21.52■■□□□ 1.04
Rnf139-201ENSMUST00000036904 Cecr2E9Q2Z1 1453 aa21.48■■□□□ 1.03
Rnf139-201ENSMUST00000036904 Os9Q8K2C7 672 aa21.48■■□□□ 1.03
Rnf139-201ENSMUST00000036904 Hnrnpul2Q00PI9 745 aaKnown RBP21.47■■□□□ 1.03
Rnf139-201ENSMUST00000036904 Ifnlr1Q8CGK5 535 aa21.47■■□□□ 1.03
Rnf139-201ENSMUST00000036904 Kif15Q6P9L6 1387 aa21.4■■□□□ 1.02
Rnf139-201ENSMUST00000036904 1700123L14RikQ3V2K7 440 aa21.4■■□□□ 1.02
Rnf139-201ENSMUST00000036904 Anp32bQ9EST5 272 aaKnown RBP21.36■■□□□ 1.01
Rnf139-201ENSMUST00000036904 Prdm10Q3UTQ7 1184 aa21.3■■□□□ 1
Rnf139-201ENSMUST00000036904 Sycp2Q9CUU3 1500 aa21.29■■□□□ 1
Rnf139-201ENSMUST00000036904 Amer1Q7TS75 1132 aa21.27■■□□□ 1
Rnf139-201ENSMUST00000036904 NeflP08551 543 aa21.23■□□□□ 0.99
Rnf139-201ENSMUST00000036904 Aplp2Q06335 707 aa21.23■□□□□ 0.99
Rnf139-201ENSMUST00000036904 Cep162Q6ZQ06 1403 aa21.23■□□□□ 0.99
Rnf139-201ENSMUST00000036904 Eea1Q8BL66 1411 aa21.23■□□□□ 0.99
Rnf139-201ENSMUST00000036904 Smarca2Q6DIC0 1577 aa21.22■□□□□ 0.99
Rnf139-201ENSMUST00000036904 Erich6D3Z6S9 713 aa21.22■□□□□ 0.99
Rnf139-201ENSMUST00000036904 CftrP26361 1476 aa21.19■□□□□ 0.98
Rnf139-201ENSMUST00000036904 Mrs2Q5NCE8 434 aa21.18■□□□□ 0.98
Rnf139-201ENSMUST00000036904 Anp32aO35381 247 aa21.17■□□□□ 0.98
Rnf139-201ENSMUST00000036904 Ccer2J3QPU5 274 aa21.14■□□□□ 0.98
Rnf139-201ENSMUST00000036904 Synj1Q8CHC4 1574 aa21.12■□□□□ 0.97
Rnf139-201ENSMUST00000036904 Calr4Q3TQS0 420 aa21.12■□□□□ 0.97
Rnf139-201ENSMUST00000036904 Hspa5P20029 655 aaKnown RBP21.11■□□□□ 0.97
Rnf139-201ENSMUST00000036904 SafbD3YXK2 937 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms