RNA–Protein interactions for RNA: ENSMUST00000034927.12

Zic1-201, Transcript of Zinc finger protein ZIC 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Zic1, Length 5,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Zic1-201ENSMUST00000034927 Rhox8Q6VSS7 320 aa29.33■■■□□ 2.29
Zic1-201ENSMUST00000034927 Rpgrip1Q9EPQ2 1331 aa27.62■■■□□ 2.01
Zic1-201ENSMUST00000034927 Esf1Q3V1V3 845 aaKnown RBP26.56■■□□□ 1.84
Zic1-201ENSMUST00000034927 NischQ80TM9 1593 aa26.38■■□□□ 1.81
Zic1-201ENSMUST00000034927 Ehmt2Q9Z148 1263 aaKnown RBP26.21■■□□□ 1.79
Zic1-201ENSMUST00000034927 Las1lA2BE28 776 aaKnown RBP26.14■■□□□ 1.78
Zic1-201ENSMUST00000034927 Zeb1Q64318 1117 aa26.08■■□□□ 1.76
Zic1-201ENSMUST00000034927 Cngb1E1AZ71 1325 aa26.01■■□□□ 1.75
Zic1-201ENSMUST00000034927 Ccdc136Q3TVA9 1136 aa25.99■■□□□ 1.75
Zic1-201ENSMUST00000034927 Trim41Q5NCC3 630 aa25.79■■□□□ 1.72
Zic1-201ENSMUST00000034927 Npm2Q80W85 207 aa25.63■■□□□ 1.69
Zic1-201ENSMUST00000034927 Wdr66E9Q743 1299 aa25.61■■□□□ 1.69
Zic1-201ENSMUST00000034927 Acin1Q9JIX8 1338 aaKnown RBP25.51■■□□□ 1.68
Zic1-201ENSMUST00000034927 Ube2uB1AUC4 352 aa25.5■■□□□ 1.67
Zic1-201ENSMUST00000034927 Ccdc180J3QNE4 1664 aa25.49■■□□□ 1.67
Zic1-201ENSMUST00000034927 Gab3Q8BSM5 595 aa25.39■■□□□ 1.66
Zic1-201ENSMUST00000034927 Rtl1Q7M732 1744 aa25.39■■□□□ 1.65
Zic1-201ENSMUST00000034927 Pelp1Q9DBD5 1123 aaKnown RBP25.36■■□□□ 1.65
Zic1-201ENSMUST00000034927 NefmP08553 848 aa25.18■■□□□ 1.62
Zic1-201ENSMUST00000034927 HrcG5E8J6 738 aa25.14■■□□□ 1.61
Zic1-201ENSMUST00000034927 Abcc9P70170 1546 aa25.11■■□□□ 1.61
Zic1-201ENSMUST00000034927 Myt1lP97500 1187 aa25■■□□□ 1.59
Zic1-201ENSMUST00000034927 Il27Q8K3I6 234 aa24.92■■□□□ 1.58
Zic1-201ENSMUST00000034927 CenpbP27790 599 aa24.85■■□□□ 1.57
Zic1-201ENSMUST00000034927 Stra8P70278 393 aa24.71■■□□□ 1.55
Zic1-201ENSMUST00000034927 UbtfP25976 765 aaKnown RBP24.64■■□□□ 1.53
Zic1-201ENSMUST00000034927 Gm35339A0A140LHH9 1649 aa24.56■■□□□ 1.52
Zic1-201ENSMUST00000034927 Pcgf6Q99NA9 353 aa24.5■■□□□ 1.51
Zic1-201ENSMUST00000034927 Npm1Q61937 292 aaKnown RBP24.43■■□□□ 1.5
Zic1-201ENSMUST00000034927 Zcchc6Q5BLK4 1491 aaKnown RBP24.4■■□□□ 1.5
Zic1-201ENSMUST00000034927 Cdk11bP24788 784 aaKnown RBP24.37■■□□□ 1.49
Zic1-201ENSMUST00000034927 Myt1Q8CFC2 1127 aa24.28■■□□□ 1.48
Zic1-201ENSMUST00000034927 Tnnt3Q9QZ47 272 aa24.17■■□□□ 1.46
Zic1-201ENSMUST00000034927 Ttbk1Q6PCN3 1308 aa24.11■■□□□ 1.45
Zic1-201ENSMUST00000034927 Abcc8B2RUS7 1588 aa24.09■■□□□ 1.45
Zic1-201ENSMUST00000034927 Nop58Q6DFW4 536 aaKnown RBP24.07■■□□□ 1.44
Zic1-201ENSMUST00000034927 Gm13697A2AK42 830 aa23.99■■□□□ 1.43
Zic1-201ENSMUST00000034927 Slc24a1Q91WD8 1130 aa23.98■■□□□ 1.43
Zic1-201ENSMUST00000034927 Supt5hO55201 1082 aaKnown RBP23.95■■□□□ 1.43
Zic1-201ENSMUST00000034927 Amer1Q7TS75 1132 aa23.89■■□□□ 1.41
Zic1-201ENSMUST00000034927 TonslQ6NZL6 1363 aa23.89■■□□□ 1.41
Zic1-201ENSMUST00000034927 NclP09405 707 aaKnown RBP23.87■■□□□ 1.41
Zic1-201ENSMUST00000034927 Os9Q8K2C7 672 aa23.86■■□□□ 1.41
Zic1-201ENSMUST00000034927 NrdcQ8BHG1 1161 aa23.82■■□□□ 1.4
Zic1-201ENSMUST00000034927 Mier1Q5UAK0 511 aa23.8■■□□□ 1.4
Zic1-201ENSMUST00000034927 Ifnlr1Q8CGK5 535 aa23.79■■□□□ 1.4
Zic1-201ENSMUST00000034927 Anp32bQ9EST5 272 aaKnown RBP23.79■■□□□ 1.4
Zic1-201ENSMUST00000034927 Fam50aQ9WV03 339 aaKnown RBP23.79■■□□□ 1.4
Zic1-201ENSMUST00000034927 Ubl4bQ9CQ84 188 aa23.78■■□□□ 1.4
Zic1-201ENSMUST00000034927 Dcaf1Q80TR8 1506 aa23.7■■□□□ 1.38
Zic1-201ENSMUST00000034927 Ap3b1Q9Z1T1 1105 aa23.69■■□□□ 1.38
Zic1-201ENSMUST00000034927 Rtl5Q5DTT4 599 aa23.62■■□□□ 1.37
Zic1-201ENSMUST00000034927 ClspnQ80YR7 1315 aa23.59■■□□□ 1.37
Zic1-201ENSMUST00000034927 NeflP08551 543 aa23.58■■□□□ 1.37
Zic1-201ENSMUST00000034927 Plppr3Q7TPB0 716 aa23.55■■□□□ 1.36
Zic1-201ENSMUST00000034927 Cep164Q5DU05 1446 aa23.51■■□□□ 1.35
Zic1-201ENSMUST00000034927 Neurod1Q60867 357 aa23.48■■□□□ 1.35
Zic1-201ENSMUST00000034927 Ppargc1bQ8VHJ7 1014 aa23.44■■□□□ 1.34
Zic1-201ENSMUST00000034927 Brd4Q9ESU6 1400 aaKnown RBP23.44■■□□□ 1.34
Zic1-201ENSMUST00000034927 Gm13695A2AK44 830 aa23.44■■□□□ 1.34
Zic1-201ENSMUST00000034927 Eif5bQ05D44 1216 aaKnown RBP23.41■■□□□ 1.34
Zic1-201ENSMUST00000034927 Hnrnpul2Q00PI9 745 aaKnown RBP23.41■■□□□ 1.34
Zic1-201ENSMUST00000034927 Hdac5Q9Z2V6 1113 aa23.39■■□□□ 1.34
Zic1-201ENSMUST00000034927 4933416C03RikQ3V063 378 aa23.37■■□□□ 1.33
Zic1-201ENSMUST00000034927 Safb2Q80YR5 991 aaKnown RBP23.36■■□□□ 1.33
Zic1-201ENSMUST00000034927 Fkbp15Q6P9Q6 1216 aaKnown RBP23.32■■□□□ 1.32
Zic1-201ENSMUST00000034927 Rb1cc1Q9ESK9 1588 aa23.25■■□□□ 1.31
Zic1-201ENSMUST00000034927 Plekhg3Q4VAC9 1341 aa23.25■■□□□ 1.31
Zic1-201ENSMUST00000034927 Zbtb7cQ8VCZ7 619 aa23.23■■□□□ 1.31
Zic1-201ENSMUST00000034927 Anp32aO35381 247 aa23.23■■□□□ 1.31
Zic1-201ENSMUST00000034927 Atp1b4Q99ME6 356 aa23.22■■□□□ 1.31
Zic1-201ENSMUST00000034927 Anks4bQ8K3X6 423 aa23.19■■□□□ 1.3
Zic1-201ENSMUST00000034927 Ercc6F8VPZ5 1481 aa23.14■■□□□ 1.29
Zic1-201ENSMUST00000034927 Clip1Q922J3 1391 aa23.11■■□□□ 1.29
Zic1-201ENSMUST00000034927 Sall2Q9QX96 1004 aa23.09■■□□□ 1.29
Zic1-201ENSMUST00000034927 4930567H17RikQ3V0K5 233 aa23.09■■□□□ 1.29
Zic1-201ENSMUST00000034927 Lmod2Q3UHZ5 550 aa23.08■■□□□ 1.29
Zic1-201ENSMUST00000034927 Ccer2J3QPU5 274 aa23.06■■□□□ 1.28
Zic1-201ENSMUST00000034927 Chic1Q8CBW7 227 aa23.05■■□□□ 1.28
Zic1-201ENSMUST00000034927 Erich6D3Z6S9 713 aa23.02■■□□□ 1.28
Zic1-201ENSMUST00000034927 NacadQ5SWP3 1504 aa23■■□□□ 1.27
Zic1-201ENSMUST00000034927 Aplp2Q06335 707 aa22.99■■□□□ 1.27
Zic1-201ENSMUST00000034927 DiexfQ8BTT6 772 aaKnown RBP22.84■■□□□ 1.25
Zic1-201ENSMUST00000034927 Eid3Q3V124 375 aa22.82■■□□□ 1.24
Zic1-201ENSMUST00000034927 Csrnp3P59055 597 aa22.81■■□□□ 1.24
Zic1-201ENSMUST00000034927 Rsf1E9PWW9 1441 aaKnown RBP22.8■■□□□ 1.24
Zic1-201ENSMUST00000034927 Baz1aO88379 1555 aa22.8■■□□□ 1.24
Zic1-201ENSMUST00000034927 Clstn2Q9ER65 966 aa22.74■■□□□ 1.23
Zic1-201ENSMUST00000034927 Kif15Q6P9L6 1387 aa22.7■■□□□ 1.22
Zic1-201ENSMUST00000034927 Golga3P55937 1487 aa22.65■■□□□ 1.22
Zic1-201ENSMUST00000034927 Mapk8ip2Q9ERE9 830 aa22.65■■□□□ 1.22
Zic1-201ENSMUST00000034927 Pds5bQ4VA53 1446 aaKnown RBP22.65■■□□□ 1.22
Zic1-201ENSMUST00000034927 Calr4Q3TQS0 420 aa22.64■■□□□ 1.22
Zic1-201ENSMUST00000034927 DaxxO35613 739 aa22.64■■□□□ 1.21
Zic1-201ENSMUST00000034927 Upf2A2AT37 1269 aaKnown RBP22.62■■□□□ 1.21
Zic1-201ENSMUST00000034927 Nlrp6Q91WS2 869 aa22.62■■□□□ 1.21
Zic1-201ENSMUST00000034927 MyclP10166 368 aa22.61■■□□□ 1.21
Zic1-201ENSMUST00000034927 Ccdc18Q640L5 1455 aa22.59■■□□□ 1.21
Zic1-201ENSMUST00000034927 Ppp1r18Q8BQ30 594 aa22.57■■□□□ 1.2
Zic1-201ENSMUST00000034927 BlmO88700 1416 aa22.54■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms