RNA–Protein interactions for RNA: ENSMUST00000031797.10

Ssmem1-201, Transcript of RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

TSL 1 (best) BASIC

Gene Ssmem1, Length 1,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1-201ENSMUST00000031797 Chic1Q8CBW7 227 aa24.6■■□□□ 1.53
Ssmem1-201ENSMUST00000031797 Mapk8ip2Q9ERE9 830 aa24.04■■□□□ 1.44
Ssmem1-201ENSMUST00000031797 Phf23Q8BSN5 401 aa22.14■■□□□ 1.14
Ssmem1-201ENSMUST00000031797 Plppr3Q7TPB0 716 aa21.27■□□□□ 0.99
Ssmem1-201ENSMUST00000031797 Gab3Q8BSM5 595 aa21.13■□□□□ 0.97
Ssmem1-201ENSMUST00000031797 Senp3Q9EP97 568 aaKnown RBP20.27■□□□□ 0.83
Ssmem1-201ENSMUST00000031797 Kcna4Q61423 654 aa19.4■□□□□ 0.7
Ssmem1-201ENSMUST00000031797 Hoxd11P23813 323 aa17.91■□□□□ 0.46
Ssmem1-201ENSMUST00000031797 Trap1aP19473 224 aa17.81■□□□□ 0.44
Ssmem1-201ENSMUST00000031797 Fam163aQ8CAA5 168 aa17.8■□□□□ 0.44
Ssmem1-201ENSMUST00000031797 Dmrt2Q8BG36 561 aa17.33■□□□□ 0.36
Ssmem1-201ENSMUST00000031797 Znf219Q6IQX8 726 aa17.17■□□□□ 0.34
Ssmem1-201ENSMUST00000031797 Ppargc1bQ8VHJ7 1014 aa16.93■□□□□ 0.3
Ssmem1-201ENSMUST00000031797 Chrna2Q91X60 512 aa16.89■□□□□ 0.29
Ssmem1-201ENSMUST00000031797 Rsph4aQ8BYM7 716 aa16.75■□□□□ 0.27
Ssmem1-201ENSMUST00000031797 Rimbp2Q80U40 1072 aa16.58■□□□□ 0.24
Ssmem1-201ENSMUST00000031797 Dnajc5bQ9CQ94 199 aa16.53■□□□□ 0.24
Ssmem1-201ENSMUST00000031797 Slc4a1apE9PX68 744 aa16.52■□□□□ 0.24
Ssmem1-201ENSMUST00000031797 Atf5O70191 283 aa16.5■□□□□ 0.23
Ssmem1-201ENSMUST00000031797 ArsiQ32KI9 573 aa16.42■□□□□ 0.22
Ssmem1-201ENSMUST00000031797 Hs6st3Q9QYK4 470 aa16.27■□□□□ 0.2
Ssmem1-201ENSMUST00000031797 Ppp4r2Q0VGB7 417 aa16.24■□□□□ 0.19
Ssmem1-201ENSMUST00000031797 Akt1s1Q9D1F4 257 aa16.24■□□□□ 0.19
Ssmem1-201ENSMUST00000031797 Slc34a2Q9DBP0 697 aa15.94■□□□□ 0.14
Ssmem1-201ENSMUST00000031797 1700123L14RikQ3V2K7 440 aa15.81■□□□□ 0.12
Ssmem1-201ENSMUST00000031797 Bach1P97302 739 aa15.72■□□□□ 0.11
Ssmem1-201ENSMUST00000031797 Sox12Q04890 314 aa15.56■□□□□ 0.08
Ssmem1-201ENSMUST00000031797 WdpcpQ8C456 722 aa15.28■□□□□ 0.04
Ssmem1-201ENSMUST00000031797 Fam71e1A1L3C1 212 aa15.13■□□□□ 0.01
Ssmem1-201ENSMUST00000031797 C1qtnf12Q8R2Z0 308 aa15.1■□□□□ 0.01
Ssmem1-201ENSMUST00000031797 Cdca7Q9D0M2 382 aa15.08■□□□□ 0
Ssmem1-201ENSMUST00000031797 Nlrp6Q91WS2 869 aa15.02■□□□□ -0
Ssmem1-201ENSMUST00000031797 GapdhsQ64467 440 aa15□□□□□ -0.01
Ssmem1-201ENSMUST00000031797 G430095P16RikE9Q913 147 aa14.77□□□□□ -0.04
Ssmem1-201ENSMUST00000031797 Zbtb7aO88939 569 aaKnown RBP14.77□□□□□ -0.04
Ssmem1-201ENSMUST00000031797 Egfem1Q8C088 590 aa14.77□□□□□ -0.04
Ssmem1-201ENSMUST00000031797 Znf704Q9ERQ3 566 aa14.77□□□□□ -0.04
Ssmem1-201ENSMUST00000031797 Ifnlr1Q8CGK5 535 aa14.74□□□□□ -0.05
Ssmem1-201ENSMUST00000031797 Ube2uB1AUC4 352 aa14.72□□□□□ -0.05
Ssmem1-201ENSMUST00000031797 Slc4a5E9Q3M5 1116 aa14.71□□□□□ -0.05
Ssmem1-201ENSMUST00000031797 Pde4cQ3UEI1 686 aa14.71□□□□□ -0.05
Ssmem1-201ENSMUST00000031797 Riok3Q9DBU3 519 aaKnown RBP14.71□□□□□ -0.05
Ssmem1-201ENSMUST00000031797 AcrbpQ3V140 540 aa14.7□□□□□ -0.06
Ssmem1-201ENSMUST00000031797 Ms4a5Q810P8 197 aa14.69□□□□□ -0.06
Ssmem1-201ENSMUST00000031797 Grwd1Q810D6 446 aaKnown RBP14.67□□□□□ -0.06
Ssmem1-201ENSMUST00000031797 Npm2Q80W85 207 aa14.6□□□□□ -0.07
Ssmem1-201ENSMUST00000031797 Trim41Q5NCC3 630 aa14.55□□□□□ -0.08
Ssmem1-201ENSMUST00000031797 MyclP10166 368 aa14.53□□□□□ -0.08
Ssmem1-201ENSMUST00000031797 Zbtb12Q9Z150 459 aa14.48□□□□□ -0.09
Ssmem1-201ENSMUST00000031797 Abcb7Q61102 752 aaKnown RBP14.45□□□□□ -0.1
Ssmem1-201ENSMUST00000031797 Rnf216P58283 853 aa14.44□□□□□ -0.1
Ssmem1-201ENSMUST00000031797 Prm3Q62100 101 aa14.41□□□□□ -0.1
Ssmem1-201ENSMUST00000031797 Gtpbp6Q3U6U5 514 aa14.37□□□□□ -0.11
Ssmem1-201ENSMUST00000031797 Rtn4Q99P72 1162 aaKnown RBP14.3□□□□□ -0.12
Ssmem1-201ENSMUST00000031797 Styxl1Q9DAR2 321 aa14.26□□□□□ -0.13
Ssmem1-201ENSMUST00000031797 Tshz2Q68FE9 1030 aa14.22□□□□□ -0.13
Ssmem1-201ENSMUST00000031797 Nkx1-1G3UXB3 402 aa14.21□□□□□ -0.13
Ssmem1-201ENSMUST00000031797 Fbln2P37889 1221 aa14.08□□□□□ -0.16
Ssmem1-201ENSMUST00000031797 Npm3Q9CPP0 175 aaKnown RBP14□□□□□ -0.17
Ssmem1-201ENSMUST00000031797 MpndQ3TV65 487 aa13.94□□□□□ -0.18
Ssmem1-201ENSMUST00000031797 Ildr2B5TVM2 661 aa13.77□□□□□ -0.21
Ssmem1-201ENSMUST00000031797 Skida1Q80YR3 822 aa13.75□□□□□ -0.21
Ssmem1-201ENSMUST00000031797 Znf703P0CL69 594 aa13.74□□□□□ -0.21
Ssmem1-201ENSMUST00000031797 Tcf3P15806 651 aa13.69□□□□□ -0.22
Ssmem1-201ENSMUST00000031797 Kcnn1Q9EQR3 537 aa13.69□□□□□ -0.22
Ssmem1-201ENSMUST00000031797 Pitpnm1O35954 1243 aa13.66□□□□□ -0.22
Ssmem1-201ENSMUST00000031797 Ppp1r37Q8BKR5 712 aa13.65□□□□□ -0.22
Ssmem1-201ENSMUST00000031797 Prr29B1ARI9 187 aa13.62□□□□□ -0.23
Ssmem1-201ENSMUST00000031797 Trim35Q8C006 501 aa13.57□□□□□ -0.24
Ssmem1-201ENSMUST00000031797 Ehmt2Q9Z148 1263 aaKnown RBP13.57□□□□□ -0.24
Ssmem1-201ENSMUST00000031797 Cacnb1Q8R3Z5 597 aa13.54□□□□□ -0.24
Ssmem1-201ENSMUST00000031797 Pip4p2Q9CZX7 257 aa13.51□□□□□ -0.25
Ssmem1-201ENSMUST00000031797 Kank3Q9Z1P7 791 aa13.51□□□□□ -0.25
Ssmem1-201ENSMUST00000031797 Lrrc43Q3V0L5 667 aa13.47□□□□□ -0.25
Ssmem1-201ENSMUST00000031797 Clcn6O35454 870 aa13.43□□□□□ -0.26
Ssmem1-201ENSMUST00000031797 Ecm2Q5FW85 670 aa13.42□□□□□ -0.26
Ssmem1-201ENSMUST00000031797 Jarid2Q62315 1234 aa13.41□□□□□ -0.26
Ssmem1-201ENSMUST00000031797 Cadps2Q8BYR5 1297 aa13.39□□□□□ -0.27
Ssmem1-201ENSMUST00000031797 Gm35339A0A140LHH9 1649 aa13.33□□□□□ -0.28
Ssmem1-201ENSMUST00000031797 Nyap1Q6PFX7 833 aa13.32□□□□□ -0.28
Ssmem1-201ENSMUST00000031797 Sra1Q80VJ2 232 aa13.15□□□□□ -0.3
Ssmem1-201ENSMUST00000031797 Hnrnpul2Q00PI9 745 aaKnown RBP13.1□□□□□ -0.31
Ssmem1-201ENSMUST00000031797 Prdm10Q3UTQ7 1184 aa13.07□□□□□ -0.32
Ssmem1-201ENSMUST00000031797 SnphQ80U23 495 aa13.07□□□□□ -0.32
Ssmem1-201ENSMUST00000031797 MycnP03966 462 aaKnown RBP13.05□□□□□ -0.32
Ssmem1-201ENSMUST00000031797 Dok7Q18PE0 504 aa12.98□□□□□ -0.33
Ssmem1-201ENSMUST00000031797 NischQ80TM9 1593 aa12.98□□□□□ -0.33
Ssmem1-201ENSMUST00000031797 Repin1Q5U4E2 545 aa12.95□□□□□ -0.34
Ssmem1-201ENSMUST00000031797 Pde4dQ01063 747 aa12.93□□□□□ -0.34
Ssmem1-201ENSMUST00000031797 Fam117bQ3U3E2 584 aa12.9□□□□□ -0.34
Ssmem1-201ENSMUST00000031797 Ppp6r1Q7TSI3 856 aa12.89□□□□□ -0.35
Ssmem1-201ENSMUST00000031797 Spock2Q9ER58 423 aa12.88□□□□□ -0.35
Ssmem1-201ENSMUST00000031797 Hdac5Q9Z2V6 1113 aa12.88□□□□□ -0.35
Ssmem1-201ENSMUST00000031797 Zbtb7bQ64321 544 aa12.84□□□□□ -0.35
Ssmem1-201ENSMUST00000031797 CrebzfQ91ZR3 358 aa12.81□□□□□ -0.36
Ssmem1-201ENSMUST00000031797 PygbQ8CI94 843 aaKnown RBP12.79□□□□□ -0.36
Ssmem1-201ENSMUST00000031797 Atad2Q8CDM1 1040 aa12.74□□□□□ -0.37
Ssmem1-201ENSMUST00000031797 Pdap1Q3UHX2 181 aaKnown RBP12.72□□□□□ -0.37
Ssmem1-201ENSMUST00000031797 Ferd3lQ923Z4 168 aa12.7□□□□□ -0.38
Ssmem1-201ENSMUST00000031797 Foxp4Q9DBY0 795 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms