RNA–Protein interactions for RNA: ENSMUST00000027165.2

Cd28-201, Transcript of T-cell-specific surface glycoprotein CD28, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cd28, Length 4,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28-201ENSMUST00000027165 NischQ80TM9 1593 aa8.43□□□□□ -1.06
Cd28-201ENSMUST00000027165 Abcc9P70170 1546 aa8.43□□□□□ -1.06
Cd28-201ENSMUST00000027165 Gm35339A0A140LHH9 1649 aa8.23□□□□□ -1.09
Cd28-201ENSMUST00000027165 Abcc8B2RUS7 1588 aa8.07□□□□□ -1.12
Cd28-201ENSMUST00000027165 Rhox8Q6VSS7 320 aa7.84□□□□□ -1.15
Cd28-201ENSMUST00000027165 NacadQ5SWP3 1504 aa7.77□□□□□ -1.17
Cd28-201ENSMUST00000027165 Rpgrip1Q9EPQ2 1331 aa7.74□□□□□ -1.17
Cd28-201ENSMUST00000027165 ScribQ80U72 1612 aa7.73□□□□□ -1.17
Cd28-201ENSMUST00000027165 Kdm5dQ62240 1548 aa7.63□□□□□ -1.19
Cd28-201ENSMUST00000027165 Ube2uB1AUC4 352 aa7.59□□□□□ -1.19
Cd28-201ENSMUST00000027165 Dnajc5bQ9CQ94 199 aa7.57□□□□□ -1.2
Cd28-201ENSMUST00000027165 Sycp2Q9CUU3 1500 aa7.53□□□□□ -1.2
Cd28-201ENSMUST00000027165 Pds5bQ4VA53 1446 aaKnown RBP7.52□□□□□ -1.21
Cd28-201ENSMUST00000027165 Trim41Q5NCC3 630 aa7.5□□□□□ -1.21
Cd28-201ENSMUST00000027165 Rtl1Q7M732 1744 aa7.46□□□□□ -1.21
Cd28-201ENSMUST00000027165 Ercc6F8VPZ5 1481 aa7.46□□□□□ -1.22
Cd28-201ENSMUST00000027165 Zcchc6Q5BLK4 1491 aaKnown RBP7.45□□□□□ -1.22
Cd28-201ENSMUST00000027165 Ubl4bQ9CQ84 188 aa7.41□□□□□ -1.22
Cd28-201ENSMUST00000027165 Rb1cc1Q9ESK9 1588 aa7.38□□□□□ -1.23
Cd28-201ENSMUST00000027165 Esf1Q3V1V3 845 aaKnown RBP7.37□□□□□ -1.23
Cd28-201ENSMUST00000027165 Dcaf1Q80TR8 1506 aa7.35□□□□□ -1.23
Cd28-201ENSMUST00000027165 Atad2bE9Q166 1460 aaKnown RBP7.32□□□□□ -1.24
Cd28-201ENSMUST00000027165 Ccdc180J3QNE4 1664 aa7.31□□□□□ -1.24
Cd28-201ENSMUST00000027165 BicraF8VPZ9 1578 aa7.29□□□□□ -1.24
Cd28-201ENSMUST00000027165 Acin1Q9JIX8 1338 aaKnown RBP7.26□□□□□ -1.25
Cd28-201ENSMUST00000027165 Phldb1Q6PDH0 1371 aaKnown RBP7.24□□□□□ -1.25
Cd28-201ENSMUST00000027165 Dnajc5P60904 198 aa7.22□□□□□ -1.25
Cd28-201ENSMUST00000027165 Pcgf6Q99NA9 353 aa7.22□□□□□ -1.25
Cd28-201ENSMUST00000027165 Cc2d2aQ8CFW7 1633 aa7.21□□□□□ -1.25
Cd28-201ENSMUST00000027165 Npm1Q61937 292 aaKnown RBP7.21□□□□□ -1.26
Cd28-201ENSMUST00000027165 Myt1Q8CFC2 1127 aa7.21□□□□□ -1.26
Cd28-201ENSMUST00000027165 Pelp1Q9DBD5 1123 aaKnown RBP7.2□□□□□ -1.26
Cd28-201ENSMUST00000027165 Baz1aO88379 1555 aa7.2□□□□□ -1.26
Cd28-201ENSMUST00000027165 Ccdc136Q3TVA9 1136 aa7.19□□□□□ -1.26
Cd28-201ENSMUST00000027165 Ttbk1Q6PCN3 1308 aa7.18□□□□□ -1.26
Cd28-201ENSMUST00000027165 Thoc2B1AZI6 1594 aaKnown RBP7.17□□□□□ -1.26
Cd28-201ENSMUST00000027165 Il27Q8K3I6 234 aa7.16□□□□□ -1.26
Cd28-201ENSMUST00000027165 Smarca2Q6DIC0 1577 aa7.12□□□□□ -1.27
Cd28-201ENSMUST00000027165 Crybg2B7ZCC2 1516 aa7.12□□□□□ -1.27
Cd28-201ENSMUST00000027165 Smarca4Q3TKT4 1613 aaKnown RBP7.11□□□□□ -1.27
Cd28-201ENSMUST00000027165 Mrc2Q64449 1479 aa7.11□□□□□ -1.27
Cd28-201ENSMUST00000027165 Iqgap2Q3UQ44 1575 aa7.1□□□□□ -1.27
Cd28-201ENSMUST00000027165 DiexfQ8BTT6 772 aaKnown RBP7.1□□□□□ -1.27
Cd28-201ENSMUST00000027165 Baz1bQ9Z277 1479 aa7.08□□□□□ -1.28
Cd28-201ENSMUST00000027165 Fam135aQ6NS59 1506 aa7.07□□□□□ -1.28
Cd28-201ENSMUST00000027165 Pabpn1Q8CCS6 302 aaKnown RBP7.07□□□□□ -1.28
Cd28-201ENSMUST00000027165 Las1lA2BE28 776 aaKnown RBP7.06□□□□□ -1.28
Cd28-201ENSMUST00000027165 Cngb1E1AZ71 1325 aa7.06□□□□□ -1.28
Cd28-201ENSMUST00000027165 Kif15Q6P9L6 1387 aa7.04□□□□□ -1.28
Cd28-201ENSMUST00000027165 Rsf1E9PWW9 1441 aaKnown RBP7.04□□□□□ -1.28
Cd28-201ENSMUST00000027165 Frmpd1A2AKB4 1549 aa7.02□□□□□ -1.28
Cd28-201ENSMUST00000027165 Brd4Q9ESU6 1400 aaKnown RBP7.02□□□□□ -1.29
Cd28-201ENSMUST00000027165 Zeb1Q64318 1117 aa7.01□□□□□ -1.29
Cd28-201ENSMUST00000027165 Cecr2E9Q2Z1 1453 aa7.01□□□□□ -1.29
Cd28-201ENSMUST00000027165 Wdr62Q3U3T8 1523 aa7□□□□□ -1.29
Cd28-201ENSMUST00000027165 Cux2P70298 1426 aa6.99□□□□□ -1.29
Cd28-201ENSMUST00000027165 Cep164Q5DU05 1446 aa6.98□□□□□ -1.29
Cd28-201ENSMUST00000027165 CenpbP27790 599 aa6.96□□□□□ -1.3
Cd28-201ENSMUST00000027165 Chic1Q8CBW7 227 aa6.95□□□□□ -1.3
Cd28-201ENSMUST00000027165 CatipB9EKE5 520 aa6.93□□□□□ -1.3
Cd28-201ENSMUST00000027165 Neurod1Q60867 357 aa6.9□□□□□ -1.31
Cd28-201ENSMUST00000027165 Plppr3Q7TPB0 716 aa6.89□□□□□ -1.31
Cd28-201ENSMUST00000027165 Ccdc18Q640L5 1455 aa6.89□□□□□ -1.31
Cd28-201ENSMUST00000027165 Ifnlr1Q8CGK5 535 aa6.88□□□□□ -1.31
Cd28-201ENSMUST00000027165 CftrP26361 1476 aa6.88□□□□□ -1.31
Cd28-201ENSMUST00000027165 Plekhg3Q4VAC9 1341 aa6.87□□□□□ -1.31
Cd28-201ENSMUST00000027165 Urb2E9Q7L1 1524 aaKnown RBP6.85□□□□□ -1.31
Cd28-201ENSMUST00000027165 Ppp1r18Q8BQ30 594 aa6.85□□□□□ -1.31
Cd28-201ENSMUST00000027165 Dhx29Q6PGC1 1365 aaKnown RBP6.83□□□□□ -1.32
Cd28-201ENSMUST00000027165 Npm2Q80W85 207 aa6.83□□□□□ -1.32
Cd28-201ENSMUST00000027165 Cttnbp2B9EJA2 1648 aa6.83□□□□□ -1.32
Cd28-201ENSMUST00000027165 1700123L14RikQ3V2K7 440 aa6.83□□□□□ -1.32
Cd28-201ENSMUST00000027165 Anks4bQ8K3X6 423 aa6.81□□□□□ -1.32
Cd28-201ENSMUST00000027165 Supt5hO55201 1082 aaKnown RBP6.8□□□□□ -1.32
Cd28-201ENSMUST00000027165 Top2bQ64511 1612 aa6.8□□□□□ -1.32
Cd28-201ENSMUST00000027165 HrcG5E8J6 738 aa6.79□□□□□ -1.32
Cd28-201ENSMUST00000027165 Aplp2Q06335 707 aa6.79□□□□□ -1.32
Cd28-201ENSMUST00000027165 Synj1Q8CHC4 1574 aa6.78□□□□□ -1.32
Cd28-201ENSMUST00000027165 Mapk8ip2Q9ERE9 830 aa6.78□□□□□ -1.32
Cd28-201ENSMUST00000027165 Lrriq1Q0P5X1 1673 aa6.78□□□□□ -1.32
Cd28-201ENSMUST00000027165 Plb1Q3TTY0 1478 aa6.78□□□□□ -1.32
Cd28-201ENSMUST00000027165 LrpprcQ6PB66 1392 aaKnown RBP6.78□□□□□ -1.32
Cd28-201ENSMUST00000027165 AknaQ80VW7 1404 aa6.77□□□□□ -1.33
Cd28-201ENSMUST00000027165 Shroom2A2ALU4 1481 aa6.77□□□□□ -1.33
Cd28-201ENSMUST00000027165 Fkbp15Q6P9Q6 1216 aaKnown RBP6.75□□□□□ -1.33
Cd28-201ENSMUST00000027165 Bcl11aQ9QYE3 773 aa6.74□□□□□ -1.33
Cd28-201ENSMUST00000027165 Ift140E9PY46 1464 aa6.73□□□□□ -1.33
Cd28-201ENSMUST00000027165 MlecQ6ZQI3 291 aaKnown RBP6.72□□□□□ -1.33
Cd28-201ENSMUST00000027165 ArxO35085 564 aa6.72□□□□□ -1.33
Cd28-201ENSMUST00000027165 PtprkP35822 1457 aa6.71□□□□□ -1.33
Cd28-201ENSMUST00000027165 Kif21aQ9QXL2 1672 aa6.71□□□□□ -1.34
Cd28-201ENSMUST00000027165 Col17a1Q07563 1470 aa6.7□□□□□ -1.34
Cd28-201ENSMUST00000027165 Eif4g3Q80XI3 1579 aaKnown RBP6.7□□□□□ -1.34
Cd28-201ENSMUST00000027165 Arhgap27A2AB59 869 aa6.69□□□□□ -1.34
Cd28-201ENSMUST00000027165 Fgd6Q69ZL1 1399 aa6.69□□□□□ -1.34
Cd28-201ENSMUST00000027165 Gm156Q58A37 223 aa6.68□□□□□ -1.34
Cd28-201ENSMUST00000027165 Pcdh10E9PXQ7 1057 aa6.68□□□□□ -1.34
Cd28-201ENSMUST00000027165 Cyb5rlB1AS42 316 aa6.67□□□□□ -1.34
Cd28-201ENSMUST00000027165 Crocc2F6XLV1 1638 aa6.66□□□□□ -1.34
Cd28-201ENSMUST00000027165 Cc2d2bA0A286YDU8 1405 aa6.66□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms