RNA–Protein interactions for RNA: ENSMUST00000021335.6

Scfd1-201, Transcript of Sec1 family domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scfd1, Length 2,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1-201ENSMUST00000021335 Chic1Q8CBW7 227 aa19.82■□□□□ 0.76
Scfd1-201ENSMUST00000021335 Mapk8ip2Q9ERE9 830 aa18.86■□□□□ 0.61
Scfd1-201ENSMUST00000021335 Phf23Q8BSN5 401 aa18.1■□□□□ 0.49
Scfd1-201ENSMUST00000021335 Plppr3Q7TPB0 716 aa17.76■□□□□ 0.43
Scfd1-201ENSMUST00000021335 Gab3Q8BSM5 595 aa17.34■□□□□ 0.37
Scfd1-201ENSMUST00000021335 Kcna4Q61423 654 aa16.79■□□□□ 0.28
Scfd1-201ENSMUST00000021335 Senp3Q9EP97 568 aaKnown RBP16.73■□□□□ 0.27
Scfd1-201ENSMUST00000021335 Ppargc1bQ8VHJ7 1014 aa15.3■□□□□ 0.04
Scfd1-201ENSMUST00000021335 Dmrt2Q8BG36 561 aa14.96□□□□□ -0.02
Scfd1-201ENSMUST00000021335 Trap1aP19473 224 aa14.68□□□□□ -0.06
Scfd1-201ENSMUST00000021335 Hoxd11P23813 323 aa14.48□□□□□ -0.09
Scfd1-201ENSMUST00000021335 Slc4a1apE9PX68 744 aa14.47□□□□□ -0.09
Scfd1-201ENSMUST00000021335 Ube2uB1AUC4 352 aa14.42□□□□□ -0.1
Scfd1-201ENSMUST00000021335 Atf5O70191 283 aa14.17□□□□□ -0.14
Scfd1-201ENSMUST00000021335 Fam71e1A1L3C1 212 aa13.84□□□□□ -0.19
Scfd1-201ENSMUST00000021335 Chrna2Q91X60 512 aa13.82□□□□□ -0.2
Scfd1-201ENSMUST00000021335 Ppp4r2Q0VGB7 417 aa13.81□□□□□ -0.2
Scfd1-201ENSMUST00000021335 Fam163aQ8CAA5 168 aa13.76□□□□□ -0.21
Scfd1-201ENSMUST00000021335 1700123L14RikQ3V2K7 440 aa13.74□□□□□ -0.21
Scfd1-201ENSMUST00000021335 Znf219Q6IQX8 726 aa13.74□□□□□ -0.21
Scfd1-201ENSMUST00000021335 Hs6st3Q9QYK4 470 aa13.7□□□□□ -0.22
Scfd1-201ENSMUST00000021335 Rsph4aQ8BYM7 716 aa13.67□□□□□ -0.22
Scfd1-201ENSMUST00000021335 Dnajc5bQ9CQ94 199 aa13.62□□□□□ -0.23
Scfd1-201ENSMUST00000021335 Rimbp2Q80U40 1072 aa13.55□□□□□ -0.24
Scfd1-201ENSMUST00000021335 Nlrp6Q91WS2 869 aa13.4□□□□□ -0.27
Scfd1-201ENSMUST00000021335 Ehmt2Q9Z148 1263 aaKnown RBP13.38□□□□□ -0.27
Scfd1-201ENSMUST00000021335 Pde4cQ3UEI1 686 aa13.33□□□□□ -0.27
Scfd1-201ENSMUST00000021335 Cdca7Q9D0M2 382 aa13.32□□□□□ -0.28
Scfd1-201ENSMUST00000021335 AcrbpQ3V140 540 aa13.3□□□□□ -0.28
Scfd1-201ENSMUST00000021335 Bach1P97302 739 aa13.22□□□□□ -0.29
Scfd1-201ENSMUST00000021335 Tshz2Q68FE9 1030 aa13.07□□□□□ -0.32
Scfd1-201ENSMUST00000021335 Akt1s1Q9D1F4 257 aa12.98□□□□□ -0.33
Scfd1-201ENSMUST00000021335 Rtn4Q99P72 1162 aaKnown RBP12.95□□□□□ -0.34
Scfd1-201ENSMUST00000021335 ArsiQ32KI9 573 aa12.92□□□□□ -0.34
Scfd1-201ENSMUST00000021335 WdpcpQ8C456 722 aa12.89□□□□□ -0.35
Scfd1-201ENSMUST00000021335 Prm3Q62100 101 aa12.88□□□□□ -0.35
Scfd1-201ENSMUST00000021335 C1qtnf12Q8R2Z0 308 aa12.87□□□□□ -0.35
Scfd1-201ENSMUST00000021335 Slc34a2Q9DBP0 697 aa12.86□□□□□ -0.35
Scfd1-201ENSMUST00000021335 Riok3Q9DBU3 519 aaKnown RBP12.81□□□□□ -0.36
Scfd1-201ENSMUST00000021335 MyclP10166 368 aa12.73□□□□□ -0.37
Scfd1-201ENSMUST00000021335 Ms4a5Q810P8 197 aa12.73□□□□□ -0.37
Scfd1-201ENSMUST00000021335 Sox12Q04890 314 aa12.71□□□□□ -0.38
Scfd1-201ENSMUST00000021335 Styxl1Q9DAR2 321 aa12.69□□□□□ -0.38
Scfd1-201ENSMUST00000021335 Npm2Q80W85 207 aa12.68□□□□□ -0.38
Scfd1-201ENSMUST00000021335 Ecm2Q5FW85 670 aa12.61□□□□□ -0.39
Scfd1-201ENSMUST00000021335 Prdm10Q3UTQ7 1184 aa12.58□□□□□ -0.4
Scfd1-201ENSMUST00000021335 Trim41Q5NCC3 630 aa12.37□□□□□ -0.43
Scfd1-201ENSMUST00000021335 G430095P16RikE9Q913 147 aa12.34□□□□□ -0.43
Scfd1-201ENSMUST00000021335 Tcf3P15806 651 aa12.18□□□□□ -0.46
Scfd1-201ENSMUST00000021335 Zbtb7aO88939 569 aaKnown RBP12.17□□□□□ -0.46
Scfd1-201ENSMUST00000021335 Ifnlr1Q8CGK5 535 aa12.14□□□□□ -0.47
Scfd1-201ENSMUST00000021335 MpndQ3TV65 487 aa12.08□□□□□ -0.48
Scfd1-201ENSMUST00000021335 Egfem1Q8C088 590 aa12.06□□□□□ -0.48
Scfd1-201ENSMUST00000021335 Fbln2P37889 1221 aa11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Abcb7Q61102 752 aaKnown RBP11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Npm3Q9CPP0 175 aaKnown RBP11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Ppp1r37Q8BKR5 712 aa11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Grwd1Q810D6 446 aaKnown RBP11.91□□□□□ -0.5
Scfd1-201ENSMUST00000021335 Prdm16A2A935 1275 aa11.91□□□□□ -0.5
Scfd1-201ENSMUST00000021335 Gtpbp6Q3U6U5 514 aa11.9□□□□□ -0.51
Scfd1-201ENSMUST00000021335 Zbtb12Q9Z150 459 aa11.87□□□□□ -0.51
Scfd1-201ENSMUST00000021335 Ppp6r1Q7TSI3 856 aa11.83□□□□□ -0.52
Scfd1-201ENSMUST00000021335 CatipB9EKE5 520 aa11.76□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Arid3aQ62431 601 aa11.76□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Nkx1-1G3UXB3 402 aa11.74□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Taok2Q6ZQ29 1240 aa11.71□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Rnf216P58283 853 aa11.69□□□□□ -0.54
Scfd1-201ENSMUST00000021335 Skida1Q80YR3 822 aa11.64□□□□□ -0.55
Scfd1-201ENSMUST00000021335 Skap1Q3UUV5 355 aa11.61□□□□□ -0.55
Scfd1-201ENSMUST00000021335 Zbtb22Q9Z0G7 638 aa11.58□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Jarid2Q62315 1234 aa11.56□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Lrrc43Q3V0L5 667 aa11.53□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Spock2Q9ER58 423 aa11.53□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Znf704Q9ERQ3 566 aa11.51□□□□□ -0.57
Scfd1-201ENSMUST00000021335 Slc4a2P13808 1237 aaKnown RBP11.45□□□□□ -0.58
Scfd1-201ENSMUST00000021335 MycnP03966 462 aaKnown RBP11.43□□□□□ -0.58
Scfd1-201ENSMUST00000021335 Slc4a5E9Q3M5 1116 aa11.39□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Ferd3lQ923Z4 168 aa11.39□□□□□ -0.59
Scfd1-201ENSMUST00000021335 TimelessQ9R1X4 1197 aa11.39□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Fam117bQ3U3E2 584 aa11.37□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Repin1Q5U4E2 545 aa11.37□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Pde4dQ01063 747 aa11.36□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Mkrn3Q60764 544 aa11.32□□□□□ -0.6
Scfd1-201ENSMUST00000021335 Esf1Q3V1V3 845 aaKnown RBP11.29□□□□□ -0.6
Scfd1-201ENSMUST00000021335 Hdac5Q9Z2V6 1113 aa11.26□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Sra1Q80VJ2 232 aa11.24□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Rgl2Q61193 778 aa11.23□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Noa1Q9JJG9 693 aaKnown RBP11.22□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Pitpnm1O35954 1243 aa11.17□□□□□ -0.62
Scfd1-201ENSMUST00000021335 Trim35Q8C006 501 aa11.15□□□□□ -0.62
Scfd1-201ENSMUST00000021335 Zeb1Q64318 1117 aa11.15□□□□□ -0.63
Scfd1-201ENSMUST00000021335 Cadps2Q8BYR5 1297 aa11.1□□□□□ -0.63
Scfd1-201ENSMUST00000021335 Slc24a1Q91WD8 1130 aa11.09□□□□□ -0.63
Scfd1-201ENSMUST00000021335 UncxO08934 530 aa11.08□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Zbtb7bQ64321 544 aa11.08□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Stk3Q9JI10 497 aa11.08□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Nyap1Q6PFX7 833 aa11.05□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Gm13697A2AK42 830 aa11.04□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Atad2Q8CDM1 1040 aa11.02□□□□□ -0.64
Scfd1-201ENSMUST00000021335 PygbQ8CI94 843 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 545.9 ms