RNA–Protein interactions for RNA: ENSMUST00000012627.4

Rpa3-201, Transcript of Replication protein A 14 kDa subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpa3, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3-201ENSMUST00000012627 Chic1Q8CBW7 227 aa33.52■■■□□ 2.96
Rpa3-201ENSMUST00000012627 Mapk8ip2Q9ERE9 830 aa33.08■■■□□ 2.89
Rpa3-201ENSMUST00000012627 Phf23Q8BSN5 401 aa30.05■■■□□ 2.4
Rpa3-201ENSMUST00000012627 Plppr3Q7TPB0 716 aa28.78■■■□□ 2.2
Rpa3-201ENSMUST00000012627 Gab3Q8BSM5 595 aa28.75■■■□□ 2.19
Rpa3-201ENSMUST00000012627 Senp3Q9EP97 568 aaKnown RBP27.44■■□□□ 1.98
Rpa3-201ENSMUST00000012627 Kcna4Q61423 654 aa25.95■■□□□ 1.74
Rpa3-201ENSMUST00000012627 Fam163aQ8CAA5 168 aa24.77■■□□□ 1.56
Rpa3-201ENSMUST00000012627 Trap1aP19473 224 aa24.35■■□□□ 1.49
Rpa3-201ENSMUST00000012627 Hoxd11P23813 323 aa24.27■■□□□ 1.48
Rpa3-201ENSMUST00000012627 Znf219Q6IQX8 726 aa23.47■■□□□ 1.35
Rpa3-201ENSMUST00000012627 Dmrt2Q8BG36 561 aa23.14■■□□□ 1.29
Rpa3-201ENSMUST00000012627 Chrna2Q91X60 512 aa23.09■■□□□ 1.29
Rpa3-201ENSMUST00000012627 Rsph4aQ8BYM7 716 aa22.93■■□□□ 1.26
Rpa3-201ENSMUST00000012627 ArsiQ32KI9 573 aa22.85■■□□□ 1.25
Rpa3-201ENSMUST00000012627 Rimbp2Q80U40 1072 aa22.58■■□□□ 1.21
Rpa3-201ENSMUST00000012627 Ppargc1bQ8VHJ7 1014 aa22.48■■□□□ 1.19
Rpa3-201ENSMUST00000012627 Dnajc5bQ9CQ94 199 aa22.24■■□□□ 1.15
Rpa3-201ENSMUST00000012627 Akt1s1Q9D1F4 257 aa22.21■■□□□ 1.15
Rpa3-201ENSMUST00000012627 Atf5O70191 283 aa22.11■■□□□ 1.13
Rpa3-201ENSMUST00000012627 Slc4a1apE9PX68 744 aa22.09■■□□□ 1.13
Rpa3-201ENSMUST00000012627 Ppp4r2Q0VGB7 417 aa21.99■■□□□ 1.11
Rpa3-201ENSMUST00000012627 Hs6st3Q9QYK4 470 aa21.93■■□□□ 1.1
Rpa3-201ENSMUST00000012627 Slc34a2Q9DBP0 697 aa21.74■■□□□ 1.07
Rpa3-201ENSMUST00000012627 GapdhsQ64467 440 aa21.48■■□□□ 1.03
Rpa3-201ENSMUST00000012627 Bach1P97302 739 aa21.31■■□□□ 1
Rpa3-201ENSMUST00000012627 1700123L14RikQ3V2K7 440 aa21.29■■□□□ 1
Rpa3-201ENSMUST00000012627 Sox12Q04890 314 aa21.16■□□□□ 0.98
Rpa3-201ENSMUST00000012627 WdpcpQ8C456 722 aa20.76■□□□□ 0.91
Rpa3-201ENSMUST00000012627 Znf704Q9ERQ3 566 aa20.45■□□□□ 0.86
Rpa3-201ENSMUST00000012627 Slc4a5E9Q3M5 1116 aa20.34■□□□□ 0.85
Rpa3-201ENSMUST00000012627 Ifnlr1Q8CGK5 535 aa20.28■□□□□ 0.84
Rpa3-201ENSMUST00000012627 Egfem1Q8C088 590 aa20.24■□□□□ 0.83
Rpa3-201ENSMUST00000012627 Grwd1Q810D6 446 aaKnown RBP20.21■□□□□ 0.83
Rpa3-201ENSMUST00000012627 C1qtnf12Q8R2Z0 308 aa20.2■□□□□ 0.82
Rpa3-201ENSMUST00000012627 G430095P16RikE9Q913 147 aa20.15■□□□□ 0.82
Rpa3-201ENSMUST00000012627 Zbtb7aO88939 569 aaKnown RBP20.15■□□□□ 0.82
Rpa3-201ENSMUST00000012627 Cdca7Q9D0M2 382 aa20.05■□□□□ 0.8
Rpa3-201ENSMUST00000012627 Fam71e1A1L3C1 212 aa19.99■□□□□ 0.79
Rpa3-201ENSMUST00000012627 Nlrp6Q91WS2 869 aa19.97■□□□□ 0.79
Rpa3-201ENSMUST00000012627 Abcb7Q61102 752 aaKnown RBP19.81■□□□□ 0.76
Rpa3-201ENSMUST00000012627 Rnf216P58283 853 aa19.73■□□□□ 0.75
Rpa3-201ENSMUST00000012627 Zbtb12Q9Z150 459 aa19.72■□□□□ 0.75
Rpa3-201ENSMUST00000012627 Riok3Q9DBU3 519 aaKnown RBP19.65■□□□□ 0.74
Rpa3-201ENSMUST00000012627 Ms4a5Q810P8 197 aa19.63■□□□□ 0.73
Rpa3-201ENSMUST00000012627 Npm2Q80W85 207 aa19.58■□□□□ 0.72
Rpa3-201ENSMUST00000012627 Trim41Q5NCC3 630 aa19.57■□□□□ 0.72
Rpa3-201ENSMUST00000012627 AcrbpQ3V140 540 aa19.55■□□□□ 0.72
Rpa3-201ENSMUST00000012627 Gtpbp6Q3U6U5 514 aa19.54■□□□□ 0.72
Rpa3-201ENSMUST00000012627 Nkx1-1G3UXB3 402 aa19.48■□□□□ 0.71
Rpa3-201ENSMUST00000012627 MyclP10166 368 aa19.45■□□□□ 0.7
Rpa3-201ENSMUST00000012627 Pde4cQ3UEI1 686 aa19.45■□□□□ 0.7
Rpa3-201ENSMUST00000012627 Ube2uB1AUC4 352 aa19.27■□□□□ 0.68
Rpa3-201ENSMUST00000012627 Prm3Q62100 101 aa19.21■□□□□ 0.67
Rpa3-201ENSMUST00000012627 Kcnn1Q9EQR3 537 aa19.08■□□□□ 0.64
Rpa3-201ENSMUST00000012627 Prr29B1ARI9 187 aa19.05■□□□□ 0.64
Rpa3-201ENSMUST00000012627 Fbln2P37889 1221 aa19.04■□□□□ 0.64
Rpa3-201ENSMUST00000012627 Znf703P0CL69 594 aa19.03■□□□□ 0.64
Rpa3-201ENSMUST00000012627 Cacnb1Q8R3Z5 597 aa19.03■□□□□ 0.64
Rpa3-201ENSMUST00000012627 Rtn4Q99P72 1162 aaKnown RBP19.01■□□□□ 0.63
Rpa3-201ENSMUST00000012627 Styxl1Q9DAR2 321 aa18.97■□□□□ 0.63
Rpa3-201ENSMUST00000012627 Ildr2B5TVM2 661 aa18.87■□□□□ 0.61
Rpa3-201ENSMUST00000012627 Npm3Q9CPP0 175 aaKnown RBP18.82■□□□□ 0.6
Rpa3-201ENSMUST00000012627 MpndQ3TV65 487 aa18.8■□□□□ 0.6
Rpa3-201ENSMUST00000012627 Tshz2Q68FE9 1030 aa18.77■□□□□ 0.6
Rpa3-201ENSMUST00000012627 Skida1Q80YR3 822 aa18.71■□□□□ 0.59
Rpa3-201ENSMUST00000012627 Pitpnm1O35954 1243 aa18.64■□□□□ 0.57
Rpa3-201ENSMUST00000012627 Pip4p2Q9CZX7 257 aa18.54■□□□□ 0.56
Rpa3-201ENSMUST00000012627 Kank3Q9Z1P7 791 aa18.54■□□□□ 0.56
Rpa3-201ENSMUST00000012627 Trim35Q8C006 501 aa18.52■□□□□ 0.56
Rpa3-201ENSMUST00000012627 Clcn6O35454 870 aa18.48■□□□□ 0.55
Rpa3-201ENSMUST00000012627 Tcf3P15806 651 aa18.22■□□□□ 0.51
Rpa3-201ENSMUST00000012627 Ppp1r37Q8BKR5 712 aa18.15■□□□□ 0.5
Rpa3-201ENSMUST00000012627 Cadps2Q8BYR5 1297 aa18.11■□□□□ 0.49
Rpa3-201ENSMUST00000012627 Lrrc43Q3V0L5 667 aa18.1■□□□□ 0.49
Rpa3-201ENSMUST00000012627 Jarid2Q62315 1234 aa18.08■□□□□ 0.48
Rpa3-201ENSMUST00000012627 Nyap1Q6PFX7 833 aa18.04■□□□□ 0.48
Rpa3-201ENSMUST00000012627 Dok7Q18PE0 504 aa17.8■□□□□ 0.44
Rpa3-201ENSMUST00000012627 SnphQ80U23 495 aa17.8■□□□□ 0.44
Rpa3-201ENSMUST00000012627 Hnrnpul2Q00PI9 745 aaKnown RBP17.75■□□□□ 0.43
Rpa3-201ENSMUST00000012627 Ehmt2Q9Z148 1263 aaKnown RBP17.74■□□□□ 0.43
Rpa3-201ENSMUST00000012627 Ecm2Q5FW85 670 aa17.68■□□□□ 0.42
Rpa3-201ENSMUST00000012627 Sra1Q80VJ2 232 aa17.62■□□□□ 0.41
Rpa3-201ENSMUST00000012627 Foxp4Q9DBY0 795 aaKnown RBP17.6■□□□□ 0.41
Rpa3-201ENSMUST00000012627 MycnP03966 462 aaKnown RBP17.48■□□□□ 0.39
Rpa3-201ENSMUST00000012627 Gm35339A0A140LHH9 1649 aa17.46■□□□□ 0.39
Rpa3-201ENSMUST00000012627 Hdac5Q9Z2V6 1113 aa17.44■□□□□ 0.38
Rpa3-201ENSMUST00000012627 ArntlQ9WTL8 632 aa17.43■□□□□ 0.38
Rpa3-201ENSMUST00000012627 NischQ80TM9 1593 aa17.36■□□□□ 0.37
Rpa3-201ENSMUST00000012627 Pde4dQ01063 747 aa17.33■□□□□ 0.36
Rpa3-201ENSMUST00000012627 PygbQ8CI94 843 aaKnown RBP17.3■□□□□ 0.36
Rpa3-201ENSMUST00000012627 Zranb1Q7M760 708 aa17.26■□□□□ 0.35
Rpa3-201ENSMUST00000012627 Gm13697A2AK42 830 aa17.25■□□□□ 0.35
Rpa3-201ENSMUST00000012627 Gjc2Q8BQU6 440 aa17.23■□□□□ 0.35
Rpa3-201ENSMUST00000012627 Repin1Q5U4E2 545 aa17.22■□□□□ 0.35
Rpa3-201ENSMUST00000012627 CrebzfQ91ZR3 358 aa17.22■□□□□ 0.35
Rpa3-201ENSMUST00000012627 Fam117bQ3U3E2 584 aa17.21■□□□□ 0.35
Rpa3-201ENSMUST00000012627 Zbtb7bQ64321 544 aa17.21■□□□□ 0.35
Rpa3-201ENSMUST00000012627 Map3k10Q66L42 940 aa17.18■□□□□ 0.34
Rpa3-201ENSMUST00000012627 Spock2Q9ER58 423 aa17.16■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms