RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 BRL1P38770 471 aa1.05□□□□□ -2.24
snR50snR50 CWH41P53008 833 aa1.05□□□□□ -2.24
snR50snR50 GAL10P04397 699 aa1.04□□□□□ -2.24
snR50snR50 SPS1P08458 490 aa1.04□□□□□ -2.24
snR50snR50 VAN1P23642 535 aa1.04□□□□□ -2.24
snR50snR50 NTA1P40354 457 aa1.04□□□□□ -2.24
snR50snR50 GAT1P43574 510 aa1.04□□□□□ -2.24
snR50snR50 UTP22P53254 1237 aaPredicted RBP1.04□□□□□ -2.24
snR50snR50 GND2P53319 492 aa1.04□□□□□ -2.24
snR50snR50 CTR9P89105 1077 aa1.04□□□□□ -2.24
snR50snR50 THI7Q05998 598 aa1.04□□□□□ -2.24
snR50snR50 TIF6Q12522 245 aaKnown RBP1.04□□□□□ -2.24
snR50snR50 COBP00163 385 aa1.03□□□□□ -2.24
snR50snR50 ISC10P32645 267 aa1.03□□□□□ -2.24
snR50snR50 GUA1P38625 525 aaKnown RBP1.03□□□□□ -2.24
snR50snR50 YOL073CQ08232 322 aa1.03□□□□□ -2.24
snR50snR50 CIR2Q08822 631 aa1.03□□□□□ -2.24
snR50snR50 HMI1Q12039 706 aa1.03□□□□□ -2.24
snR50snR50 CMR1Q12510 522 aaKnown RBP1.03□□□□□ -2.24
snR50snR50 TRS33Q99394 268 aa1.03□□□□□ -2.24
snR50snR50 NPR1P22211 790 aa1.02□□□□□ -2.25
snR50snR50 PKC1P24583 1151 aa1.02□□□□□ -2.25
snR50snR50 DUR3P33413 735 aa1.02□□□□□ -2.25
snR50snR50 ARL1P38116 183 aaKnown RBP1.02□□□□□ -2.25
snR50snR50 FIR1P40020 876 aa1.02□□□□□ -2.25
snR50snR50 HXT8P40886 569 aa1.02□□□□□ -2.25
snR50snR50 MEP2P41948 499 aa1.02□□□□□ -2.25
snR50snR50 BUL1P48524 976 aa1.02□□□□□ -2.25
snR50snR50 YLR040CQ07988 224 aa1.02□□□□□ -2.25
snR50snR50 RCL1Q08096 367 aaPredicted RBP1.02□□□□□ -2.25
snR50snR50 AIM39Q08223 395 aa1.02□□□□□ -2.25
snR50snR50 TY1A-LR4P0C2I8 440 aaKnown RBP1.01□□□□□ -2.25
snR50snR50 TY1A-DR6P0CX70 440 aa1.01□□□□□ -2.25
snR50snR50 TY1A-ER1P0CX71 440 aa1.01□□□□□ -2.25
snR50snR50 TY1A-LR2P0CX72 440 aa1.01□□□□□ -2.25
snR50snR50 TY1A-PLP0CX73 440 aa1.01□□□□□ -2.25
snR50snR50 TY1A-JR1P0CX74 440 aa1.01□□□□□ -2.25
snR50snR50 TY1A-LR3P0CX75 440 aa1.01□□□□□ -2.25
snR50snR50 TY1A-ML2P0CX76 440 aa1.01□□□□□ -2.25
snR50snR50 EMC1P25574 760 aa1.01□□□□□ -2.25
snR50snR50 SIS2P36024 562 aa1.01□□□□□ -2.25
snR50snR50 SPC42P36094 363 aa1.01□□□□□ -2.25
snR50snR50 RIX1P38883 763 aaPredicted RBP1.01□□□□□ -2.25
snR50snR50 EXG2P52911 562 aa1.01□□□□□ -2.25
snR50snR50 YLR257WQ06146 321 aaKnown RBP1.01□□□□□ -2.25
snR50snR50 TY1A-GR1Q12085 440 aa1.01□□□□□ -2.25
snR50snR50 SPO21Q12411 609 aa1.01□□□□□ -2.25
snR50snR50 TY1A-PR3Q6Q5H1 440 aaKnown RBP1.01□□□□□ -2.25
snR50snR50 TY1A-OLQ92392 440 aaKnown RBP1.01□□□□□ -2.25
snR50snR50 GAL2P13181 574 aa1□□□□□ -2.25
snR50snR50 RET1P22276 1149 aaKnown RBP1□□□□□ -2.25
snR50snR50 PLB1P39105 664 aa1□□□□□ -2.25
snR50snR50 GPB2P39717 880 aa1□□□□□ -2.25
snR50snR50 MRPS35P53292 345 aa1□□□□□ -2.25
snR50snR50 UBP3Q01477 912 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
snR50snR50 OMS1Q06668 471 aa1□□□□□ -2.25
snR50snR50 AVO1Q08236 1176 aa1□□□□□ -2.25
snR50snR50 LAS17Q12446 633 aa1□□□□□ -2.25
snR50snR50 TUB1P09733 447 aaKnown RBP0.99□□□□□ -2.25
snR50snR50 IRS4P36115 615 aaKnown RBP0.99□□□□□ -2.25
snR50snR50 PSY2P40164 858 aa0.99□□□□□ -2.25
snR50snR50 SEC26P41810 973 aaKnown RBP0.99□□□□□ -2.25
snR50snR50 PUS2P53167 370 aa0.99□□□□□ -2.25
snR50snR50 MUK1Q02866 612 aa0.99□□□□□ -2.25
snR50snR50 RIB2Q12362 591 aaKnown RBP0.99□□□□□ -2.25
snR50snR50 CMP2P14747 604 aa0.98□□□□□ -2.25
snR50snR50 PFK1P16861 987 aaKnown RBP0.98□□□□□ -2.25
snR50snR50 LEO1P38439 464 aa0.98□□□□□ -2.25
snR50snR50 NOP12Q08208 459 aaKnown RBP0.98□□□□□ -2.25
snR50snR50 APC11Q12157 165 aa0.98□□□□□ -2.25
snR50snR50 MCM5P29496 775 aaKnown RBP0.97□□□□□ -2.25
snR50snR50 SMC1P32908 1225 aa0.97□□□□□ -2.25
snR50snR50 PPZ2P33329 710 aa0.97□□□□□ -2.25
snR50snR50 KTR7P40504 517 aa0.97□□□□□ -2.25
snR50snR50 YJL045WP47052 634 aa0.97□□□□□ -2.25
snR50snR50 GCV2P49095 1034 aa0.97□□□□□ -2.25
snR50snR50 ACF2Q12168 779 aa0.97□□□□□ -2.25
snR50snR50 RAD55P38953 406 aa0.96□□□□□ -2.26
snR50snR50 ALD4P46367 519 aaKnown RBP0.96□□□□□ -2.26
snR50snR50 PBP1P53297 722 aaKnown RBP0.96□□□□□ -2.26
snR50snR50 PUF6Q04373 656 aaKnown RBP0.96□□□□□ -2.26
snR50snR50 NBA1Q08229 501 aaKnown RBP0.96□□□□□ -2.26
snR50snR50 HRK1Q08732 759 aaKnown RBP0.96□□□□□ -2.26
snR50snR50 TIF1P10081 395 aaKnown RBP0.95□□□□□ -2.26
snR50snR50 EFT1P32324 842 aaKnown RBP0.95□□□□□ -2.26
snR50snR50 RTG2P32608 588 aaKnown RBP0.95□□□□□ -2.26
snR50snR50 YSC84P32793 468 aa0.95□□□□□ -2.26
snR50snR50 BAP2P38084 609 aa0.95□□□□□ -2.26
snR50snR50 SDS3P40505 327 aa0.95□□□□□ -2.26
snR50snR50 SLS1P42900 643 aa0.95□□□□□ -2.26
snR50snR50 SAP155P43612 1002 aa0.95□□□□□ -2.26
snR50snR50 YMR206WQ03695 313 aa0.95□□□□□ -2.26
snR50snR50 RSA3Q05942 220 aaKnown RBP0.95□□□□□ -2.26
snR50snR50 SUL1P38359 859 aa0.94□□□□□ -2.26
snR50snR50 DMA1P38823 416 aa0.94□□□□□ -2.26
snR50snR50 YJL007CP47080 104 aa0.94□□□□□ -2.26
snR50snR50 GTF1P53260 183 aaPredicted RBP0.94□□□□□ -2.26
snR50snR50 ARO10Q06408 635 aa0.94□□□□□ -2.26
snR50snR50 HSE1P38753 452 aa0.93□□□□□ -2.26
snR50snR50 NEM1P38757 446 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms