RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17a	snR17a	POL12	P38121	705 aa	Predicted RBP	4.82	□□□□□ -1.64
snR17a	snR17a	DAK2	P43550	591 aa		4.82	□□□□□ -1.64
snR17a	snR17a	CWC22	P53333	577 aa	Known RBP	4.82	□□□□□ -1.64
snR17a	snR17a	ULP1	Q02724	621 aa		4.82	□□□□□ -1.64
snR17a	snR17a	UTP5	Q04177	643 aa	Known RBP	4.82	□□□□□ -1.64
snR17a	snR17a	YVC1	Q12324	675 aa		4.82	□□□□□ -1.64
snR17a	snR17a	DFG16	Q99234	619 aa		4.82	□□□□□ -1.64
snR17a	snR17a	EAR1	Q03212	550 aa		4.81	□□□□□ -1.64
snR17a	snR17a	GIN4	Q12263	1142 aa		4.81	□□□□□ -1.64
snR17a	snR17a	HSP78	P33416	811 aa		4.8	□□□□□ -1.64
snR17a	snR17a	SEA4	P38164	1038 aa		4.8	□□□□□ -1.64
snR17a	snR17a	PEX28	P38848	579 aa		4.8	□□□□□ -1.64
snR17a	snR17a	XKS1	P42826	600 aa		4.8	□□□□□ -1.64
snR17a	snR17a	ADI1	Q03677	179 aa		4.8	□□□□□ -1.64
snR17a	snR17a	SSY1	Q03770	852 aa		4.8	□□□□□ -1.64
snR17a	snR17a	TPP1	Q03796	238 aa		4.8	□□□□□ -1.64
snR17a	snR17a	PUS7	Q08647	676 aa	Known RBP	4.8	□□□□□ -1.64
snR17a	snR17a	HRK1	Q08732	759 aa	Known RBP	4.8	□□□□□ -1.64
snR17a	snR17a	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
snR17a	snR17a	RET1	P22276	1149 aa	Known RBP	4.79	□□□□□ -1.64
snR17a	snR17a	PRO1	P32264	428 aa		4.79	□□□□□ -1.64
snR17a	snR17a	SWE1	P32944	819 aa		4.79	□□□□□ -1.64
snR17a	snR17a	PEX7	P39108	375 aa		4.79	□□□□□ -1.64
snR17a	snR17a	NUG1	P40010	520 aa	Known RBP	4.79	□□□□□ -1.64
snR17a	snR17a	NIT1	P40447	199 aa		4.79	□□□□□ -1.64
snR17a	snR17a	ORC3	P54790	616 aa		4.79	□□□□□ -1.64
snR17a	snR17a	YML020W	Q03722	664 aa		4.79	□□□□□ -1.64
snR17a	snR17a	YLR257W	Q06146	321 aa	Known RBP	4.79	□□□□□ -1.64
snR17a	snR17a	WHI5	Q12416	295 aa		4.79	□□□□□ -1.64
snR17a	snR17a	UGA4	P32837	571 aa		4.78	□□□□□ -1.64
snR17a	snR17a	RPT1	P33299	467 aa	Known RBP	4.78	□□□□□ -1.64
snR17a	snR17a	SEG2	P34250	1132 aa		4.78	□□□□□ -1.64
snR17a	snR17a	LRG1	P35688	1017 aa		4.78	□□□□□ -1.64
snR17a	snR17a	ADD66	P36040	267 aa		4.78	□□□□□ -1.64
snR17a	snR17a	ATG36	P46983	293 aa		4.78	□□□□□ -1.64
snR17a	snR17a	PRP43	P53131	767 aa	Known RBP	4.78	□□□□□ -1.64
snR17a	snR17a	RKM2	Q03942	479 aa		4.78	□□□□□ -1.64
snR17a	snR17a	IPL1	P38991	367 aa		4.77	□□□□□ -1.65
snR17a	snR17a	VPS53	P47061	822 aa		4.77	□□□□□ -1.65
snR17a	snR17a	YPL109C	Q02981	657 aa		4.77	□□□□□ -1.65
snR17a	snR17a	RSA3	Q05942	220 aa	Known RBP	4.77	□□□□□ -1.65
snR17a	snR17a	PTC7	P38797	343 aa		4.76	□□□□□ -1.65
snR17a	snR17a	UBP5	P39944	805 aa		4.76	□□□□□ -1.65
snR17a	snR17a	YGL140C	P53120	1219 aa		4.76	□□□□□ -1.65
snR17a	snR17a	YNR063W	P53749	607 aa		4.76	□□□□□ -1.65
snR17a	snR17a	HXK1	P04806	485 aa	Known RBP	4.75	□□□□□ -1.65
snR17a	snR17a	TAF13	P11747	167 aa		4.75	□□□□□ -1.65
snR17a	snR17a	RNQ1	P25367	405 aa		4.75	□□□□□ -1.65
snR17a	snR17a	MDL2	P33311	773 aa		4.75	□□□□□ -1.65
snR17a	snR17a	RDH54	P38086	958 aa		4.75	□□□□□ -1.65
snR17a	snR17a	MGE1	P38523	228 aa		4.75	□□□□□ -1.65
snR17a	snR17a	YHL012W	P38709	493 aa		4.75	□□□□□ -1.65
snR17a	snR17a	QNS1	P38795	714 aa	Known RBP	4.75	□□□□□ -1.65
snR17a	snR17a	FOL2	P51601	243 aa	Known RBP	4.75	□□□□□ -1.65
snR17a	snR17a	TPO2	P53283	614 aa		4.75	□□□□□ -1.65
snR17a	snR17a	SUB1	P54000	292 aa	Known RBP	4.75	□□□□□ -1.65
snR17a	snR17a	VPS72	Q03388	795 aa		4.75	□□□□□ -1.65
snR17a	snR17a	MCD1	Q12158	566 aa		4.75	□□□□□ -1.65
snR17a	snR17a	SEC23	P15303	768 aa	Known RBP	4.74	□□□□□ -1.65
snR17a	snR17a	GAS1	P22146	559 aa	Known RBP	4.74	□□□□□ -1.65
snR17a	snR17a	FAA3	P39002	694 aa		4.74	□□□□□ -1.65
snR17a	snR17a	GTS1	P40956	396 aa		4.74	□□□□□ -1.65
snR17a	snR17a	MRPS18	P42847	217 aa		4.74	□□□□□ -1.65
snR17a	snR17a	SEN54	Q02825	467 aa	Predicted RBP	4.74	□□□□□ -1.65
snR17a	snR17a	EST2	Q06163	884 aa		4.74	□□□□□ -1.65
snR17a	snR17a	TOS4	Q06266	489 aa		4.74	□□□□□ -1.65
snR17a	snR17a	LPX1	Q12405	387 aa	Known RBP	4.74	□□□□□ -1.65
snR17a	snR17a	PRE9	P23638	258 aa	Known RBP	4.73	□□□□□ -1.65
snR17a	snR17a	SRO9	P25567	434 aa	Known RBP	4.73	□□□□□ -1.65
snR17a	snR17a	YGR122W	P53272	402 aa		4.73	□□□□□ -1.65
snR17a	snR17a	RTS3	P53289	263 aa		4.73	□□□□□ -1.65
snR17a	snR17a	SAM35	P14693	329 aa		4.72	□□□□□ -1.65
snR17a	snR17a	NMD3	P38861	518 aa	Known RBP	4.72	□□□□□ -1.65
snR17a	snR17a	NBA1	Q08229	501 aa	Known RBP	4.72	□□□□□ -1.65
snR17a	snR17a	TOA1	P32773	286 aa		4.71	□□□□□ -1.66
snR17a	snR17a	YJL045W	P47052	634 aa		4.71	□□□□□ -1.66
snR17a	snR17a	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
snR17a	snR17a	NOP8	Q08287	484 aa	Predicted RBP	4.71	□□□□□ -1.66
snR17a	snR17a	COQ4	O13525	335 aa		4.7	□□□□□ -1.66
snR17a	snR17a	YSC84	P32793	468 aa		4.7	□□□□□ -1.66
snR17a	snR17a	PIC2	P40035	300 aa		4.7	□□□□□ -1.66
snR17a	snR17a	POL32	P47110	350 aa		4.7	□□□□□ -1.66
snR17a	snR17a	ENV11	P53246	860 aa		4.7	□□□□□ -1.66
snR17a	snR17a	NOP7	P53261	605 aa	Known RBP	4.7	□□□□□ -1.66
snR17a	snR17a	HIF1	Q12373	385 aa		4.7	□□□□□ -1.66
snR17a	snR17a	PTC5	Q12511	572 aa		4.7	□□□□□ -1.66
snR17a	snR17a	RAD2	P07276	1031 aa		4.69	□□□□□ -1.66
snR17a	snR17a	HEM13	P11353	328 aa	Known RBP	4.69	□□□□□ -1.66
snR17a	snR17a	ASF1	P32447	279 aa		4.69	□□□□□ -1.66
snR17a	snR17a	AIM26	P32858	118 aa		4.69	□□□□□ -1.66
snR17a	snR17a	CCZ1	P38273	704 aa		4.69	□□□□□ -1.66
snR17a	snR17a	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
snR17a	snR17a	ENT3	P47160	408 aa		4.69	□□□□□ -1.66
snR17a	snR17a	CDA2	Q06703	312 aa		4.69	□□□□□ -1.66
snR17a	snR17a	RLP24	Q07915	199 aa	Known RBP	4.69	□□□□□ -1.66
snR17a	snR17a	BUD21	Q08492	214 aa	Predicted RBP	4.69	□□□□□ -1.66
snR17a	snR17a	DED1	P06634	604 aa	Known RBP	4.68	□□□□□ -1.66
snR17a	snR17a	KIP1	P28742	1111 aa		4.68	□□□□□ -1.66
snR17a	snR17a	HEM3	P28789	327 aa		4.68	□□□□□ -1.66
snR17a	snR17a	TSA1	P34760	196 aa	Known RBP	4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms