RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W CDC20P26309 610 aa1.22□□□□□ -2.21
RDS3YPR094W MCM5P29496 775 aaKnown RBP1.22□□□□□ -2.21
RDS3YPR094W PMI40P29952 429 aaKnown RBP1.22□□□□□ -2.21
RDS3YPR094W DOM34P33309 386 aa1.22□□□□□ -2.21
RDS3YPR094W ECM2P38241 364 aaKnown RBP1.22□□□□□ -2.21
RDS3YPR094W YAR028WP39548 234 aa1.22□□□□□ -2.21
RDS3YPR094W YJL045WP47052 634 aa1.22□□□□□ -2.21
RDS3YPR094W HGH1P48362 394 aaKnown RBP1.22□□□□□ -2.21
RDS3YPR094W MNN10P50108 393 aaKnown RBP1.22□□□□□ -2.21
RDS3YPR094W MCM6P53091 1017 aaKnown RBP1.22□□□□□ -2.21
RDS3YPR094W NUT1P53114 1132 aa1.22□□□□□ -2.21
RDS3YPR094W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
RDS3YPR094W KIN4Q01919 800 aa1.22□□□□□ -2.21
RDS3YPR094W TMA10Q06177 86 aa1.22□□□□□ -2.21
RDS3YPR094W RSC58Q07979 502 aa1.22□□□□□ -2.21
RDS3YPR094W YOR352WQ08816 343 aa1.22□□□□□ -2.21
RDS3YPR094W SPO21Q12411 609 aa1.22□□□□□ -2.21
RDS3YPR094W FUR4P05316 633 aaKnown RBP1.21□□□□□ -2.22
RDS3YPR094W CDC6P09119 513 aa1.21□□□□□ -2.22
RDS3YPR094W SRM1P21827 482 aa1.21□□□□□ -2.22
RDS3YPR094W PUF4P25339 888 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22 RIP-Chip
RDS3YPR094W MSS4P38994 779 aa1.21□□□□□ -2.22
RDS3YPR094W MON1P53129 644 aa1.21□□□□□ -2.22
RDS3YPR094W RSA3Q05942 220 aaKnown RBP1.21□□□□□ -2.22
RDS3YPR094W PMT7Q06644 662 aa1.21□□□□□ -2.22
RDS3YPR094W NOB1Q08444 459 aaKnown RBP1.21□□□□□ -2.22
RDS3YPR094W GAL10P04397 699 aa1.2□□□□□ -2.22
RDS3YPR094W PMA1P05030 918 aaKnown RBP1.2□□□□□ -2.22
RDS3YPR094W STE11P23561 717 aa1.2□□□□□ -2.22
RDS3YPR094W YSC84P32793 468 aa1.2□□□□□ -2.22
RDS3YPR094W DEF1P35732 738 aaKnown RBP1.2□□□□□ -2.22
RDS3YPR094W YKL077WP36081 392 aa1.2□□□□□ -2.22
RDS3YPR094W HNT2P49775 206 aa1.2□□□□□ -2.22
RDS3YPR094W UTP5Q04177 643 aaKnown RBP1.2□□□□□ -2.22
RDS3YPR094W ACK1Q07622 623 aaPredicted RBP1.2□□□□□ -2.22
RDS3YPR094W PPM2Q08282 695 aa1.2□□□□□ -2.22
RDS3YPR094W HRK1Q08732 759 aaKnown RBP1.2□□□□□ -2.22
RDS3YPR094W MNL2Q12205 849 aa1.2□□□□□ -2.22
RDS3YPR094W CMP2P14747 604 aa1.19□□□□□ -2.22
RDS3YPR094W MOH1P38191 138 aa1.19□□□□□ -2.22
RDS3YPR094W QNS1P38795 714 aaKnown RBP1.19□□□□□ -2.22
RDS3YPR094W RVS167P39743 482 aaKnown RBP1.19□□□□□ -2.22
RDS3YPR094W SEC26P41810 973 aaKnown RBP1.19□□□□□ -2.22
RDS3YPR094W XKS1P42826 600 aa1.19□□□□□ -2.22
RDS3YPR094W ENV11P53246 860 aa1.19□□□□□ -2.22
RDS3YPR094W YNR063WP53749 607 aa1.19□□□□□ -2.22
RDS3YPR094W YNL011CP53980 444 aa1.19□□□□□ -2.22
RDS3YPR094W LGE1Q02796 332 aaKnown RBP1.19□□□□□ -2.22
RDS3YPR094W YAP6Q03935 383 aa1.19□□□□□ -2.22
RDS3YPR094W BSC2Q05611 235 aa1.19□□□□□ -2.22
RDS3YPR094W BDF2Q07442 638 aa1.19□□□□□ -2.22
RDS3YPR094W RXT3Q07458 294 aa1.19□□□□□ -2.22
RDS3YPR094W GPB1Q08886 897 aa1.19□□□□□ -2.22
RDS3YPR094W DCG1P32460 244 aa1.18□□□□□ -2.22
RDS3YPR094W OAR1P35731 278 aa1.18□□□□□ -2.22
RDS3YPR094W HSE1P38753 452 aa1.18□□□□□ -2.22
RDS3YPR094W ATF1P40353 525 aa1.18□□□□□ -2.22
RDS3YPR094W MTR4P47047 1073 aaKnown RBP1.18□□□□□ -2.22
RDS3YPR094W UFD2P54860 961 aa1.18□□□□□ -2.22
RDS3YPR094W INP54Q08227 384 aaKnown RBP1.18□□□□□ -2.22
RDS3YPR094W NBA1Q08229 501 aaKnown RBP1.18□□□□□ -2.22
RDS3YPR094W LAP2Q10740 671 aa1.18□□□□□ -2.22
RDS3YPR094W MSH3P25336 1018 aa1.17□□□□□ -2.22
RDS3YPR094W EMC1P25574 760 aa1.17□□□□□ -2.22
RDS3YPR094W KIP1P28742 1111 aa1.17□□□□□ -2.22
RDS3YPR094W BAP2P38084 609 aa1.17□□□□□ -2.22
RDS3YPR094W GLO3P38682 493 aaKnown RBP1.17□□□□□ -2.22
RDS3YPR094W GPB2P39717 880 aa1.17□□□□□ -2.22
RDS3YPR094W SIP5P40210 489 aaKnown RBP1.17□□□□□ -2.22
RDS3YPR094W QDR1P40475 563 aa1.17□□□□□ -2.22
RDS3YPR094W GCV2P49095 1034 aa1.17□□□□□ -2.22
RDS3YPR094W GTF1P53260 183 aaPredicted RBP1.17□□□□□ -2.22
RDS3YPR094W VPS62P53285 467 aa1.17□□□□□ -2.22
RDS3YPR094W NOG1Q02892 647 aaKnown RBP1.17□□□□□ -2.22
RDS3YPR094W YLR224WQ05947 369 aa1.17□□□□□ -2.22
RDS3YPR094W URN1Q06525 465 aaKnown RBP1.17□□□□□ -2.22
RDS3YPR094W RIB2Q12362 591 aaKnown RBP1.17□□□□□ -2.22
RDS3YPR094W COQ4O13525 335 aa1.16□□□□□ -2.22
RDS3YPR094W HEM13P11353 328 aaKnown RBP1.16□□□□□ -2.22
RDS3YPR094W SNF5P18480 905 aa1.16□□□□□ -2.22
RDS3YPR094W SHU2P38957 223 aa1.16□□□□□ -2.22
RDS3YPR094W PLB1P39105 664 aa1.16□□□□□ -2.22
RDS3YPR094W YFL054CP43549 646 aa1.16□□□□□ -2.22
RDS3YPR094W UBA2P52488 636 aa1.16□□□□□ -2.22
RDS3YPR094W PEX13P80667 386 aa1.16□□□□□ -2.22
RDS3YPR094W CDC55Q00362 526 aa1.16□□□□□ -2.22
RDS3YPR094W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22 RIP-Chip
RDS3YPR094W TRS120Q04183 1289 aa1.16□□□□□ -2.22
RDS3YPR094W RSB1Q08417 382 aa1.16□□□□□ -2.22
RDS3YPR094W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
RDS3YPR094W HMI1Q12039 706 aa1.16□□□□□ -2.22
RDS3YPR094W AFG2P32794 780 aa1.15□□□□□ -2.23
RDS3YPR094W UGA4P32837 571 aa1.15□□□□□ -2.23
RDS3YPR094W CUE2P36075 443 aaKnown RBP1.15□□□□□ -2.23
RDS3YPR094W RFC5P38251 354 aa1.15□□□□□ -2.23
RDS3YPR094W CCZ1P38273 704 aa1.15□□□□□ -2.23
RDS3YPR094W PIK1P39104 1066 aa1.15□□□□□ -2.23
RDS3YPR094W QRI1P43123 477 aaKnown RBP1.15□□□□□ -2.23
RDS3YPR094W PBP1P53297 722 aaKnown RBP1.15□□□□□ -2.23
RDS3YPR094W TNA1P53322 534 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 1220.3 ms