RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W KAR2P16474 682 aaKnown RBP1.63□□□□□ -2.15
SEC8YPR055W YAR028WP39548 234 aa1.63□□□□□ -2.15
SEC8YPR055W MMM1P41800 426 aa1.63□□□□□ -2.15
SEC8YPR055W YFL054CP43549 646 aa1.63□□□□□ -2.15
SEC8YPR055W YJR107WP47145 328 aa1.63□□□□□ -2.15
SEC8YPR055W NOG1Q02892 647 aaKnown RBP1.63□□□□□ -2.15
SEC8YPR055W TPP1Q03796 238 aa1.63□□□□□ -2.15
SEC8YPR055W JIP5Q06214 492 aaPredicted RBP1.63□□□□□ -2.15
SEC8YPR055W RET1P22276 1149 aaKnown RBP1.62□□□□□ -2.15
SEC8YPR055W MOT2P34909 587 aaKnown RBP1.62□□□□□ -2.15
SEC8YPR055W ATG14P38270 344 aa1.62□□□□□ -2.15
SEC8YPR055W MTR4P47047 1073 aaKnown RBP1.62□□□□□ -2.15
SEC8YPR055W CTH1P47976 325 aa1.62□□□□□ -2.15
SEC8YPR055W YLR257WQ06146 321 aaKnown RBP1.62□□□□□ -2.15
SEC8YPR055W EST2Q06163 884 aa1.62□□□□□ -2.15
SEC8YPR055W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SEC8YPR055W AFG2P32794 780 aa1.61□□□□□ -2.15
SEC8YPR055W RDH54P38086 958 aa1.61□□□□□ -2.15
SEC8YPR055W SHU2P38957 223 aa1.61□□□□□ -2.15
SEC8YPR055W YJL045WP47052 634 aa1.61□□□□□ -2.15
SEC8YPR055W RCM1P53972 490 aa1.61□□□□□ -2.15
SEC8YPR055W ESC2Q06340 456 aa1.61□□□□□ -2.15
SEC8YPR055W MED7Q08278 222 aa1.61□□□□□ -2.15
SEC8YPR055W ALG3P38179 458 aa1.61□□□□□ -2.15
SEC8YPR055W INP52P50942 1183 aa1.61□□□□□ -2.15
SEC8YPR055W ALT1P52893 592 aa1.61□□□□□ -2.15
SEC8YPR055W YVC1Q12324 675 aa1.61□□□□□ -2.15
SEC8YPR055W SEC23P15303 768 aaKnown RBP1.61□□□□□ -2.15
SEC8YPR055W VMA4P22203 233 aaKnown RBP1.61□□□□□ -2.15
SEC8YPR055W PRO1P32264 428 aa1.61□□□□□ -2.15
SEC8YPR055W SMY2P32909 740 aaKnown RBP1.61□□□□□ -2.15
SEC8YPR055W ADD66P36040 267 aa1.61□□□□□ -2.15
SEC8YPR055W PTC7P38797 343 aa1.61□□□□□ -2.15
SEC8YPR055W GTS1P40956 396 aa1.61□□□□□ -2.15
SEC8YPR055W OYE3P41816 400 aaPredicted RBP1.61□□□□□ -2.15
SEC8YPR055W RSA3Q05942 220 aaKnown RBP1.61□□□□□ -2.15
SEC8YPR055W PUS7Q08647 676 aaKnown RBP1.61□□□□□ -2.15
SEC8YPR055W MCD1Q12158 566 aa1.61□□□□□ -2.15
SEC8YPR055W YLL054CQ12244 843 aa1.61□□□□□ -2.15
SEC8YPR055W PTC5Q12511 572 aa1.61□□□□□ -2.15
SEC8YPR055W PRI2P20457 528 aa1.6□□□□□ -2.15
SEC8YPR055W MKK2P32491 506 aa1.6□□□□□ -2.15
SEC8YPR055W PET112P33893 541 aa1.6□□□□□ -2.15
SEC8YPR055W HXT13P39924 564 aa1.6□□□□□ -2.15
SEC8YPR055W CIT3P43635 486 aa1.6□□□□□ -2.15
SEC8YPR055W HXT17P53631 564 aa1.6□□□□□ -2.15
SEC8YPR055W HXT15P54854 567 aa1.6□□□□□ -2.15
SEC8YPR055W SSY1Q03770 852 aa1.6□□□□□ -2.15
SEC8YPR055W AOS1Q06624 347 aa1.6□□□□□ -2.15
SEC8YPR055W BRE4Q07660 1125 aa1.6□□□□□ -2.15
SEC8YPR055W RCL1Q08096 367 aaPredicted RBP1.6□□□□□ -2.15
SEC8YPR055W MSB1P21339 1137 aaKnown RBP1.6□□□□□ -2.15
SEC8YPR055W KIP1P28742 1111 aa1.6□□□□□ -2.15
SEC8YPR055W MLS1P30952 554 aa1.6□□□□□ -2.15
SEC8YPR055W LRG1P35688 1017 aa1.6□□□□□ -2.15
SEC8YPR055W MCM7P38132 845 aa1.6□□□□□ -2.15
SEC8YPR055W QNS1P38795 714 aaKnown RBP1.6□□□□□ -2.15
SEC8YPR055W FAA4P47912 694 aaKnown RBP1.6□□□□□ -2.15
SEC8YPR055W MAG2Q06436 670 aaKnown RBP1.6□□□□□ -2.15
SEC8YPR055W PUF4P25339 888 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
SEC8YPR055W AIM26P32858 118 aa1.59□□□□□ -2.15
SEC8YPR055W NNK1P36003 928 aa1.59□□□□□ -2.15
SEC8YPR055W POL12P38121 705 aaPredicted RBP1.59□□□□□ -2.15
SEC8YPR055W GNP1P48813 663 aa1.59□□□□□ -2.15
SEC8YPR055W YLR225CQ05948 407 aaKnown RBP1.59□□□□□ -2.15
SEC8YPR055W ESF1Q06344 628 aaKnown RBP1.59□□□□□ -2.15
SEC8YPR055W SPO21Q12411 609 aa1.59□□□□□ -2.15
SEC8YPR055W DUT1P33317 147 aa1.59□□□□□ -2.15
SEC8YPR055W RER2P35196 286 aa1.59□□□□□ -2.15
SEC8YPR055W TRE1Q08919 783 aa1.59□□□□□ -2.15
SEC8YPR055W LAP2Q10740 671 aa1.59□□□□□ -2.15
SEC8YPR055W HSP78P33416 811 aa1.59□□□□□ -2.16
SEC8YPR055W ETP1P38748 585 aaKnown RBP1.59□□□□□ -2.16
SEC8YPR055W PEX7P39108 375 aa1.59□□□□□ -2.16
SEC8YPR055W IRC24P40580 263 aa1.59□□□□□ -2.16
SEC8YPR055W CWC24P53769 259 aa1.59□□□□□ -2.16
SEC8YPR055W EEB1Q02891 456 aa1.59□□□□□ -2.16
SEC8YPR055W GDE1Q02979 1223 aa1.59□□□□□ -2.16
SEC8YPR055W TIF35Q04067 274 aaKnown RBP1.59□□□□□ -2.16
SEC8YPR055W TRP2P00899 507 aaKnown RBP1.58□□□□□ -2.16
SEC8YPR055W YER152CP10356 443 aa1.58□□□□□ -2.16
SEC8YPR055W SYP1P25623 870 aaKnown RBP1.58□□□□□ -2.16
SEC8YPR055W ASF1P32447 279 aa1.58□□□□□ -2.16
SEC8YPR055W PUB1P32588 453 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
SEC8YPR055W ABD1P32783 436 aaPredicted RBP1.58□□□□□ -2.16
SEC8YPR055W YHL012WP38709 493 aa1.58□□□□□ -2.16
SEC8YPR055W VAC8P39968 578 aa1.58□□□□□ -2.16
SEC8YPR055W MXR1P40029 184 aa1.58□□□□□ -2.16
SEC8YPR055W MAD1P40957 749 aa1.58□□□□□ -2.16
SEC8YPR055W AVT1P47082 602 aa1.58□□□□□ -2.16
SEC8YPR055W ALD6P54115 500 aaKnown RBP1.58□□□□□ -2.16
SEC8YPR055W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
SEC8YPR055W SAM35P14693 329 aa1.58□□□□□ -2.16
SEC8YPR055W YSC84P32793 468 aa1.58□□□□□ -2.16
SEC8YPR055W SEG2P34250 1132 aa1.58□□□□□ -2.16
SEC8YPR055W YKL069WP36088 180 aa1.58□□□□□ -2.16
SEC8YPR055W ARL1P38116 183 aaKnown RBP1.58□□□□□ -2.16
SEC8YPR055W HSE1P38753 452 aa1.58□□□□□ -2.16
SEC8YPR055W SIW14P53965 281 aa1.58□□□□□ -2.16
SEC8YPR055W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms