RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W FYV10P40492 516 aa6.23□□□□□ -1.41
PDH1YPR002W MTC5Q03897 1148 aa6.23□□□□□ -1.41
PDH1YPR002W PGA3Q12746 312 aaKnown RBP6.23□□□□□ -1.41
PDH1YPR002W SSK22P25390 1331 aaPredicted RBP6.23□□□□□ -1.41
PDH1YPR002W GSY2P27472 705 aa6.23□□□□□ -1.41
PDH1YPR002W SRP40P32583 406 aaPredicted RBP6.23□□□□□ -1.41
PDH1YPR002W MFT1P33441 392 aaKnown RBP6.23□□□□□ -1.41
PDH1YPR002W APL2P36000 726 aaPredicted RBP6.23□□□□□ -1.41
PDH1YPR002W ENT3P47160 408 aa6.23□□□□□ -1.41
PDH1YPR002W VPS64Q03944 604 aa6.23□□□□□ -1.41
PDH1YPR002W OPI1P21957 404 aa6.22□□□□□ -1.41
PDH1YPR002W PHO87P25360 923 aa6.22□□□□□ -1.41
PDH1YPR002W RFC5P38251 354 aa6.22□□□□□ -1.41
PDH1YPR002W OSH3P38713 996 aaKnown RBP6.22□□□□□ -1.41
PDH1YPR002W RRM3P38766 723 aa6.22□□□□□ -1.41
PDH1YPR002W HAL5P38970 855 aaKnown RBP6.22□□□□□ -1.41
PDH1YPR002W RAD26P40352 1085 aa6.22□□□□□ -1.41
PDH1YPR002W CTH1P47976 325 aa6.22□□□□□ -1.41
PDH1YPR002W RMT2Q03305 412 aa6.22□□□□□ -1.41
PDH1YPR002W WAR1Q03631 944 aa6.22□□□□□ -1.41
PDH1YPR002W COG4Q06096 861 aa6.22□□□□□ -1.41
PDH1YPR002W LAM4P38800 1345 aa6.22□□□□□ -1.41
PDH1YPR002W PET111P08468 800 aa6.21□□□□□ -1.42
PDH1YPR002W HAP4P14064 554 aa6.21□□□□□ -1.42
PDH1YPR002W PEP3P27801 918 aa6.21□□□□□ -1.42
PDH1YPR002W MRT4P33201 236 aaKnown RBP6.21□□□□□ -1.42
PDH1YPR002W YKE2P52553 114 aa6.21□□□□□ -1.42
PDH1YPR002W YGL082WP53155 381 aa6.21□□□□□ -1.42
PDH1YPR002W ARP5P53946 755 aa6.21□□□□□ -1.42
PDH1YPR002W MKS1P34072 584 aa6.2□□□□□ -1.42
PDH1YPR002W PXL1P36166 706 aa6.2□□□□□ -1.42
PDH1YPR002W PSY4P38193 441 aa6.2□□□□□ -1.42
PDH1YPR002W UBX7P38349 436 aa6.2□□□□□ -1.42
PDH1YPR002W SMC3P47037 1230 aa6.2□□□□□ -1.42
PDH1YPR002W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
PDH1YPR002W UBP16Q02863 499 aa6.2□□□□□ -1.42
PDH1YPR002W FCP1Q03254 732 aa6.2□□□□□ -1.42
PDH1YPR002W VPS60Q03390 229 aa6.2□□□□□ -1.42
PDH1YPR002W SSP2Q08646 371 aa6.2□□□□□ -1.42
PDH1YPR002W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
PDH1YPR002W PSH1Q12161 406 aa6.2□□□□□ -1.42
PDH1YPR002W NOP14Q99207 810 aaKnown RBP6.2□□□□□ -1.42
PDH1YPR002W PGI1P12709 554 aaKnown RBP6.19□□□□□ -1.42
PDH1YPR002W MIP1P15801 1254 aa6.19□□□□□ -1.42
PDH1YPR002W MRC1P25588 1096 aa6.19□□□□□ -1.42
PDH1YPR002W YFL034WP43564 1073 aa6.19□□□□□ -1.42
PDH1YPR002W SAC3P46674 1301 aa6.19□□□□□ -1.42
PDH1YPR002W RPN7Q06103 429 aaKnown RBP6.19□□□□□ -1.42
PDH1YPR002W CTI6Q08923 506 aa6.19□□□□□ -1.42
PDH1YPR002W TSC13Q99190 310 aa6.19□□□□□ -1.42
PDH1YPR002W SEC18P18759 758 aaKnown RBP6.18□□□□□ -1.42
PDH1YPR002W STE11P23561 717 aa6.18□□□□□ -1.42
PDH1YPR002W MCM4P30665 933 aaKnown RBP6.18□□□□□ -1.42
PDH1YPR002W YKT6P36015 200 aaKnown RBP6.18□□□□□ -1.42
PDH1YPR002W TFG2P41896 400 aaPredicted RBP6.18□□□□□ -1.42
PDH1YPR002W ACS2P52910 683 aaKnown RBP6.18□□□□□ -1.42
PDH1YPR002W YBP2P53169 641 aa6.18□□□□□ -1.42
PDH1YPR002W ISU1Q03020 165 aa6.18□□□□□ -1.42
PDH1YPR002W VMS1Q04311 632 aaKnown RBP6.18□□□□□ -1.42
PDH1YPR002W HDA3Q06623 655 aa6.18□□□□□ -1.42
PDH1YPR002W MET32Q12041 191 aa6.18□□□□□ -1.42
PDH1YPR002W CDC4P07834 779 aa6.18□□□□□ -1.42
PDH1YPR002W MSH1P25846 959 aa6.18□□□□□ -1.42
PDH1YPR002W BUD6P41697 788 aa6.18□□□□□ -1.42
PDH1YPR002W ADR1P07248 1323 aa6.17□□□□□ -1.42
PDH1YPR002W RPL22AP05749 121 aaKnown RBP6.17□□□□□ -1.42
PDH1YPR002W SPC110P32380 944 aa6.17□□□□□ -1.42
PDH1YPR002W YBL086CP38177 466 aa6.17□□□□□ -1.42
PDH1YPR002W YNL193WP53870 558 aa6.17□□□□□ -1.42
PDH1YPR002W APL4Q12028 832 aa6.17□□□□□ -1.42
PDH1YPR002W RPP2BP02400 110 aaKnown RBP6.16□□□□□ -1.42
PDH1YPR002W PHO13P19881 312 aa6.16□□□□□ -1.42
PDH1YPR002W CBP3P21560 335 aa6.16□□□□□ -1.42
PDH1YPR002W CDC3P32457 520 aaKnown RBP6.16□□□□□ -1.42
PDH1YPR002W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
PDH1YPR002W PCH2P38126 564 aa6.16□□□□□ -1.42
PDH1YPR002W TMA16Q08687 178 aa6.16□□□□□ -1.42
PDH1YPR002W PHM7Q12252 991 aa6.16□□□□□ -1.42
PDH1YPR002W SPT2P06843 333 aaPredicted RBP6.15□□□□□ -1.42
PDH1YPR002W IMP2'P32351 346 aa6.15□□□□□ -1.42
PDH1YPR002W UTR2P32623 467 aa6.15□□□□□ -1.42
PDH1YPR002W SLX8P40072 274 aa6.15□□□□□ -1.42
PDH1YPR002W YMR147WP40218 223 aaKnown RBP6.15□□□□□ -1.42
PDH1YPR002W EPL1P43572 832 aa6.15□□□□□ -1.42
PDH1YPR002W PRP31P49704 494 aaPredicted RBP6.15□□□□□ -1.42
PDH1YPR002W ROM1P53046 1155 aa6.15□□□□□ -1.42
PDH1YPR002W VPS75P53853 264 aa6.15□□□□□ -1.42
PDH1YPR002W KAR5Q04746 504 aa6.15□□□□□ -1.42
PDH1YPR002W SML1Q04964 104 aa6.15□□□□□ -1.42
PDH1YPR002W ATG13Q06628 738 aa6.15□□□□□ -1.42
PDH1YPR002W SUP35P05453 685 aaKnown RBP6.14□□□□□ -1.43
PDH1YPR002W STE6P12866 1290 aa6.14□□□□□ -1.43
PDH1YPR002W CCC2P38995 1004 aa6.14□□□□□ -1.43
PDH1YPR002W NOC2P39744 710 aaKnown RBP6.14□□□□□ -1.43
PDH1YPR002W MSH4P40965 878 aaPredicted RBP6.14□□□□□ -1.43
PDH1YPR002W CUE3P53137 624 aaKnown RBP6.14□□□□□ -1.43
PDH1YPR002W ALD3P54114 506 aa6.14□□□□□ -1.43
PDH1YPR002W MRS2Q01926 470 aa6.14□□□□□ -1.43
PDH1YPR002W DFG5Q05031 458 aa6.14□□□□□ -1.43
PDH1YPR002W DCS2Q12123 353 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms