RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS17	YOR132W	SMY2	P32909	740 aa	Known RBP	5.08	□□□□□ -1.6
VPS17	YOR132W	RKM2	Q03942	479 aa		5.08	□□□□□ -1.6
VPS17	YOR132W	EST2	Q06163	884 aa		5.07	□□□□□ -1.6
VPS17	YOR132W	SSN2	P38931	1420 aa		5.07	□□□□□ -1.6
VPS17	YOR132W	INO80	P53115	1489 aa		5.07	□□□□□ -1.6
VPS17	YOR132W	GLT1	Q12680	2145 aa	Known RBP	5.06	□□□□□ -1.6
VPS17	YOR132W	NFS1	P25374	497 aa		5.06	□□□□□ -1.6
VPS17	YOR132W	CIT3	P43635	486 aa		5.06	□□□□□ -1.6
VPS17	YOR132W	ALT1	P52893	592 aa		5.06	□□□□□ -1.6
VPS17	YOR132W	SNU71	P53207	620 aa	Known RBP	5.06	□□□□□ -1.6
VPS17	YOR132W	YGR130C	P53278	816 aa		5.06	□□□□□ -1.6
VPS17	YOR132W	YNR063W	P53749	607 aa		5.06	□□□□□ -1.6
VPS17	YOR132W	MED7	Q08278	222 aa		5.06	□□□□□ -1.6
VPS17	YOR132W	YOR059C	Q08448	450 aa	Known RBP	5.06	□□□□□ -1.6
VPS17	YOR132W	RET1	P22276	1149 aa	Known RBP	5.05	□□□□□ -1.6
VPS17	YOR132W	ENT3	P47160	408 aa		5.05	□□□□□ -1.6
VPS17	YOR132W	ALO1	P54783	526 aa	Known RBP	5.05	□□□□□ -1.6
VPS17	YOR132W	HDA2	Q06629	674 aa		5.05	□□□□□ -1.6
VPS17	YOR132W	MRL1	Q06815	381 aa		5.05	□□□□□ -1.6
VPS17	YOR132W	NSI1	Q12457	570 aa		5.05	□□□□□ -1.6
VPS17	YOR132W	TRP3	P00937	484 aa		5.04	□□□□□ -1.6
VPS17	YOR132W	GCR1	P07261	785 aa		5.04	□□□□□ -1.6
VPS17	YOR132W	NAP1	P25293	417 aa	Known RBP	5.04	□□□□□ -1.6
VPS17	YOR132W	WHI3	P34761	661 aa	Known RBP	5.04	□□□□□ -1.6
VPS17	YOR132W	SIW14	P53965	281 aa		5.04	□□□□□ -1.6
VPS17	YOR132W	CYC7	P00045	113 aa		5.03	□□□□□ -1.6
VPS17	YOR132W	DED1	P06634	604 aa	Known RBP	5.03	□□□□□ -1.6
VPS17	YOR132W	PET112	P33893	541 aa		5.03	□□□□□ -1.6
VPS17	YOR132W	VPS53	P47061	822 aa		5.03	□□□□□ -1.6
VPS17	YOR132W	RCM1	P53972	490 aa		5.03	□□□□□ -1.6
VPS17	YOR132W	SVF1	Q05515	481 aa		5.03	□□□□□ -1.6
VPS17	YOR132W	RSA3	Q05942	220 aa	Known RBP	5.03	□□□□□ -1.6
VPS17	YOR132W	YLR257W	Q06146	321 aa	Known RBP	5.03	□□□□□ -1.6
VPS17	YOR132W	RAD27	P26793	382 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	MNR2	P35724	969 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	OMA1	P36163	345 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	RTT10	Q08924	1013 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	YKR073C	P36153	106 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	TOS1	P38288	455 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	QNS1	P38795	714 aa	Known RBP	5.02	□□□□□ -1.61
VPS17	YOR132W	GNP1	P48813	663 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	EAR1	Q03212	550 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	TPP1	Q03796	238 aa		5.02	□□□□□ -1.61
VPS17	YOR132W	PUS7	Q08647	676 aa	Known RBP	5.02	□□□□□ -1.61
VPS17	YOR132W	HRK1	Q08732	759 aa	Known RBP	5.02	□□□□□ -1.61
VPS17	YOR132W	TMA46	Q12000	345 aa	Known RBP	5.02	□□□□□ -1.61
VPS17	YOR132W	MAC1	P35192	417 aa		5.01	□□□□□ -1.61
VPS17	YOR132W	ROD1	Q02805	837 aa		5.01	□□□□□ -1.61
VPS17	YOR132W	YVC1	Q12324	675 aa		5.01	□□□□□ -1.61
VPS17	YOR132W	PTC5	Q12511	572 aa		5.01	□□□□□ -1.61
VPS17	YOR132W	MKK2	P32491	506 aa		5	□□□□□ -1.61
VPS17	YOR132W	AFG2	P32794	780 aa		5	□□□□□ -1.61
VPS17	YOR132W	HXT13	P39924	564 aa		5	□□□□□ -1.61
VPS17	YOR132W	HXT17	P53631	564 aa		5	□□□□□ -1.61
VPS17	YOR132W	HXT15	P54854	567 aa		5	□□□□□ -1.61
VPS17	YOR132W	AIM44	Q99299	758 aa		5	□□□□□ -1.61
VPS17	YOR132W	ALG3	P38179	458 aa		4.99	□□□□□ -1.61
VPS17	YOR132W	OYE3	P41816	400 aa	Predicted RBP	4.99	□□□□□ -1.61
VPS17	YOR132W	INP52	P50942	1183 aa		4.99	□□□□□ -1.61
VPS17	YOR132W	CDC34	P14682	295 aa		4.99	□□□□□ -1.61
VPS17	YOR132W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
VPS17	YOR132W	NMD3	P38861	518 aa	Known RBP	4.99	□□□□□ -1.61
VPS17	YOR132W	TRE1	Q08919	783 aa		4.99	□□□□□ -1.61
VPS17	YOR132W	GCD1	P09032	578 aa	Predicted RBP	4.98	□□□□□ -1.61
VPS17	YOR132W	CLN2	P20438	545 aa		4.98	□□□□□ -1.61
VPS17	YOR132W	SYP1	P25623	870 aa	Known RBP	4.98	□□□□□ -1.61
VPS17	YOR132W	LIP5	P32875	414 aa		4.98	□□□□□ -1.61
VPS17	YOR132W	MAD1	P40957	749 aa		4.98	□□□□□ -1.61
VPS17	YOR132W	RAT1	Q02792	1006 aa	Known RBP	4.98	□□□□□ -1.61
VPS17	YOR132W	BRE4	Q07660	1125 aa		4.98	□□□□□ -1.61
VPS17	YOR132W	KIP1	P28742	1111 aa		4.97	□□□□□ -1.61
VPS17	YOR132W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
VPS17	YOR132W	ORC1	P54784	914 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS17	YOR132W	JIP5	Q06214	492 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS17	YOR132W	MAG2	Q06436	670 aa	Known RBP	4.97	□□□□□ -1.61
VPS17	YOR132W	TCB3	Q03640	1545 aa	Known RBP	4.97	□□□□□ -1.61
VPS17	YOR132W	DUT1	P33317	147 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	RER2	P35196	286 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	YHL012W	P38709	493 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	PEX7	P39108	375 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	CNN1	P43618	361 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	YJL045W	P47052	634 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	IOC4	Q04213	475 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	YPL260W	Q08977	551 aa		4.96	□□□□□ -1.61
VPS17	YOR132W	ADP1	P25371	1049 aa		4.96	□□□□□ -1.62
VPS17	YOR132W	YSC84	P32793	468 aa		4.96	□□□□□ -1.62
VPS17	YOR132W	PAM1	P37304	830 aa	Known RBP	4.96	□□□□□ -1.62
VPS17	YOR132W	RGD1	P38339	666 aa		4.96	□□□□□ -1.62
VPS17	YOR132W	MET10	P39692	1035 aa		4.96	□□□□□ -1.62
VPS17	YOR132W	CTH1	P47976	325 aa		4.96	□□□□□ -1.62
VPS17	YOR132W	DBP5	P20449	482 aa	Known RBP	4.95	□□□□□ -1.62
VPS17	YOR132W	PRO1	P32264	428 aa		4.95	□□□□□ -1.62
VPS17	YOR132W	MDL2	P33311	773 aa		4.95	□□□□□ -1.62
VPS17	YOR132W	SDH1	Q00711	640 aa		4.95	□□□□□ -1.62
VPS17	YOR132W	PIN2	Q12057	282 aa		4.95	□□□□□ -1.62
VPS17	YOR132W	SAM35	P14693	329 aa		4.94	□□□□□ -1.62
VPS17	YOR132W	SRO9	P25567	434 aa	Known RBP	4.94	□□□□□ -1.62
VPS17	YOR132W	VPS16	Q03308	798 aa		4.94	□□□□□ -1.62
VPS17	YOR132W	SSY1	Q03770	852 aa		4.94	□□□□□ -1.62
VPS17	YOR132W	SPO21	Q12411	609 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms