RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W RAD18P10862 487 aa16.39■□□□□ 0.21
SHR5YOL110W MBR1P23493 339 aa16.39■□□□□ 0.21
SHR5YOL110W PHO88P38264 188 aaPredicted RBP16.39■□□□□ 0.21
SHR5YOL110W NET1P47035 1189 aa16.39■□□□□ 0.21
SHR5YOL110W CSC1Q06538 782 aa16.39■□□□□ 0.21
SHR5YOL110W HXK1P04806 485 aaKnown RBP16.38■□□□□ 0.21
SHR5YOL110W RGP1P16664 663 aa16.38■□□□□ 0.21
SHR5YOL110W ROX1P25042 368 aa16.38■□□□□ 0.21
SHR5YOL110W CIR1P42940 261 aa16.38■□□□□ 0.21
SHR5YOL110W TIP41Q12199 356 aa16.38■□□□□ 0.21
SHR5YOL110W ARP8Q12386 881 aaKnown RBP RIP-Chip data16.38■□□□□ 0.21not detected
SHR5YOL110W SNF7P39929 240 aaKnown RBP16.37■□□□□ 0.21
SHR5YOL110W BNI5P53890 448 aaKnown RBP16.37■□□□□ 0.21
SHR5YOL110W RBA50Q04418 439 aa16.37■□□□□ 0.21
SHR5YOL110W UBX5Q06682 500 aa16.37■□□□□ 0.21
SHR5YOL110W CCT5P40413 562 aaKnown RBP16.36■□□□□ 0.21
SHR5YOL110W FMS1P50264 508 aa16.36■□□□□ 0.21
SHR5YOL110W AIM44Q99299 758 aa16.36■□□□□ 0.21
SHR5YOL110W THR4P16120 514 aaKnown RBP16.35■□□□□ 0.21
SHR5YOL110W ELM1P32801 640 aa16.35■□□□□ 0.21
SHR5YOL110W RSM25P40496 264 aa16.35■□□□□ 0.21
SHR5YOL110W JIP4Q03361 876 aa16.35■□□□□ 0.21
SHR5YOL110W CST9Q06032 482 aa16.35■□□□□ 0.21
SHR5YOL110W NDT80P38830 627 aa16.34■□□□□ 0.21
SHR5YOL110W RET3P53600 189 aa16.34■□□□□ 0.21
SHR5YOL110W ALD6P54115 500 aaKnown RBP16.34■□□□□ 0.21
SHR5YOL110W CSM3Q04659 317 aa16.34■□□□□ 0.21
SHR5YOL110W YOR296WQ08748 1289 aa16.34■□□□□ 0.21
SHR5YOL110W CFT2Q12102 859 aaPredicted RBP16.34■□□□□ 0.21
SHR5YOL110W FRS2P15625 503 aaKnown RBP16.33■□□□□ 0.2
SHR5YOL110W YKR018CP36114 725 aa16.33■□□□□ 0.2
SHR5YOL110W ETP1P38748 585 aaKnown RBP16.33■□□□□ 0.2
SHR5YOL110W DSE4P53753 1117 aa16.33■□□□□ 0.2
SHR5YOL110W RTC4P53850 401 aa16.33■□□□□ 0.2
SHR5YOL110W EIS1Q05050 843 aaKnown RBP16.33■□□□□ 0.2
SHR5YOL110W ETT1Q08421 412 aaKnown RBP16.33■□□□□ 0.2
SHR5YOL110W APC11Q12157 165 aa16.33■□□□□ 0.2
SHR5YOL110W ARL1P38116 183 aaKnown RBP16.32■□□□□ 0.2
SHR5YOL110W RFT1P38206 574 aaPredicted RBP16.32■□□□□ 0.2
SHR5YOL110W RSC30P38781 883 aa16.32■□□□□ 0.2
SHR5YOL110W PAN5P38787 379 aa16.32■□□□□ 0.2
SHR5YOL110W TRS120Q04183 1289 aa16.32■□□□□ 0.2
SHR5YOL110W SAM1P10659 382 aaKnown RBP16.31■□□□□ 0.2
SHR5YOL110W VMA2P16140 517 aaKnown RBP16.31■□□□□ 0.2
SHR5YOL110W SRO9P25567 434 aaKnown RBP16.31■□□□□ 0.2
SHR5YOL110W APE3P37302 537 aaKnown RBP16.31■□□□□ 0.2
SHR5YOL110W STT3P39007 718 aaKnown RBP16.31■□□□□ 0.2
SHR5YOL110W RVS167P39743 482 aaKnown RBP16.31■□□□□ 0.2
SHR5YOL110W ALG1P16661 449 aa16.3■□□□□ 0.2
SHR5YOL110W URA1P28272 314 aaPredicted RBP16.3■□□□□ 0.2
SHR5YOL110W TGL1P34163 548 aa16.3■□□□□ 0.2
SHR5YOL110W SUL1P38359 859 aa16.3■□□□□ 0.2
SHR5YOL110W YAF9P53930 226 aa16.3■□□□□ 0.2
SHR5YOL110W TMA64Q04600 565 aaKnown RBP16.3■□□□□ 0.2
SHR5YOL110W SLK19Q08581 821 aaKnown RBP16.3■□□□□ 0.2
SHR5YOL110W OXR1Q08952 273 aa16.3■□□□□ 0.2
SHR5YOL110W PTC5Q12511 572 aa16.3■□□□□ 0.2
SHR5YOL110W DDP1Q99321 188 aaKnown RBP16.3■□□□□ 0.2
SHR5YOL110W IXR1P33417 597 aa16.29■□□□□ 0.2
SHR5YOL110W GPB2P39717 880 aa16.29■□□□□ 0.2
SHR5YOL110W CIT3P43635 486 aa16.29■□□□□ 0.2
SHR5YOL110W SPH1Q06160 661 aa16.29■□□□□ 0.2
SHR5YOL110W RKM4Q12504 494 aa16.29■□□□□ 0.2
SHR5YOL110W CDC60P26637 1090 aaKnown RBP16.28■□□□□ 0.2
SHR5YOL110W ASH1P34233 588 aa16.28■□□□□ 0.2
SHR5YOL110W ERG7P38604 731 aa16.28■□□□□ 0.2
SHR5YOL110W LIF1P53150 421 aa16.28■□□□□ 0.2
SHR5YOL110W SES1P07284 462 aaKnown RBP16.27■□□□□ 0.2
SHR5YOL110W MCM3P24279 971 aaKnown RBP16.27■□□□□ 0.2
SHR5YOL110W UTR4P32626 227 aa16.27■□□□□ 0.2
SHR5YOL110W DID4P36108 232 aa16.27■□□□□ 0.2
SHR5YOL110W SPR3P41901 512 aa16.27■□□□□ 0.2
SHR5YOL110W AIM33Q04516 312 aa16.27■□□□□ 0.2
SHR5YOL110W MMR1Q06324 491 aa16.27■□□□□ 0.2
SHR5YOL110W GUD1Q07729 489 aa16.27■□□□□ 0.2
SHR5YOL110W RPN12P32496 274 aa16.26■□□□□ 0.19
SHR5YOL110W UGA4P32837 571 aa16.26■□□□□ 0.19
SHR5YOL110W SDA1P53313 767 aaKnown RBP16.26■□□□□ 0.19
SHR5YOL110W YGR273CP53329 174 aa16.26■□□□□ 0.19
SHR5YOL110W OYE2Q03558 400 aaKnown RBP16.26■□□□□ 0.19
SHR5YOL110W TIF6Q12522 245 aaKnown RBP16.26■□□□□ 0.19
SHR5YOL110W CDC19P00549 500 aaKnown RBP16.25■□□□□ 0.19
SHR5YOL110W PHR1P05066 565 aaKnown RBP RIP-Chip data16.25■□□□□ 0.19not detected
SHR5YOL110W GSY1P23337 708 aa16.25■□□□□ 0.19
SHR5YOL110W PKC1P24583 1151 aa16.25■□□□□ 0.19
SHR5YOL110W EUG1P32474 517 aa16.25■□□□□ 0.19
SHR5YOL110W CUE3P53137 624 aaKnown RBP16.25■□□□□ 0.19
SHR5YOL110W TUF1P02992 437 aaKnown RBP16.24■□□□□ 0.19
SHR5YOL110W MOT2P34909 587 aaKnown RBP16.24■□□□□ 0.19
SHR5YOL110W YKT6P36015 200 aaKnown RBP16.24■□□□□ 0.19
SHR5YOL110W YGR153WP48238 217 aa16.24■□□□□ 0.19
SHR5YOL110W YPT11P48559 417 aa16.24■□□□□ 0.19
SHR5YOL110W TY3A-GQ12173 290 aa16.24■□□□□ 0.19
SHR5YOL110W TY3A-IQ99219 290 aa16.24■□□□□ 0.19
SHR5YOL110W HIS4P00815 799 aaKnown RBP16.23■□□□□ 0.19
SHR5YOL110W MCM4P30665 933 aaKnown RBP16.23■□□□□ 0.19
SHR5YOL110W SHP1P34223 423 aa16.23■□□□□ 0.19
SHR5YOL110W MCR1P36060 302 aaKnown RBP16.23■□□□□ 0.19
SHR5YOL110W ORC6P38826 435 aa16.23■□□□□ 0.19
SHR5YOL110W GAA1P39012 614 aa16.23■□□□□ 0.19
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms