RNA–Protein interactions for RNA: YNL037C

IDH1, Transcript of Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, yeast

Gene IDH1, Length 1,083 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IDH1	YNL037C	MXR1	P40029	184 aa		13.57	□□□□□ -0.24
IDH1	YNL037C	PCI8	P40512	444 aa		13.57	□□□□□ -0.24
IDH1	YNL037C	MAK11	P20484	414 aa	Known RBP	13.56	□□□□□ -0.24
IDH1	YNL037C	ELG1	Q12050	791 aa		13.56	□□□□□ -0.24
IDH1	YNL037C	CEX1	Q12453	761 aa		13.56	□□□□□ -0.24
IDH1	YNL037C	SAS3	P34218	831 aa		13.55	□□□□□ -0.24
IDH1	YNL037C	YGL138C	P53122	345 aa		13.55	□□□□□ -0.24
IDH1	YNL037C	LIF1	P53150	421 aa		13.55	□□□□□ -0.24
IDH1	YNL037C	NAF1	P53919	492 aa	Known RBP	13.55	□□□□□ -0.24
IDH1	YNL037C	VPS20	Q04272	221 aa		13.55	□□□□□ -0.24
IDH1	YNL037C	TY1B-A	O13527	1196 aa	Known RBP	13.54	□□□□□ -0.24
IDH1	YNL037C	RGT1	P32862	1170 aa		13.54	□□□□□ -0.24
IDH1	YNL037C	MCR1	P36060	302 aa	Known RBP	13.54	□□□□□ -0.24
IDH1	YNL037C	ASE1	P50275	885 aa		13.54	□□□□□ -0.24
IDH1	YNL037C	DUS4	Q06063	367 aa		13.54	□□□□□ -0.24
IDH1	YNL037C	MET7	Q08645	548 aa		13.54	□□□□□ -0.24
IDH1	YNL037C	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.53	□□□□□ -0.24	not detected
IDH1	YNL037C	SRP40	P32583	406 aa	Predicted RBP	13.53	□□□□□ -0.24
IDH1	YNL037C	PAN5	P38787	379 aa		13.53	□□□□□ -0.24
IDH1	YNL037C	PSF2	P40359	213 aa		13.53	□□□□□ -0.24
IDH1	YNL037C	DUS3	Q06053	668 aa	Known RBP	13.53	□□□□□ -0.24
IDH1	YNL037C	ICL2	Q12031	575 aa		13.53	□□□□□ -0.24
IDH1	YNL037C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.53	□□□□□ -0.24	not detected
IDH1	YNL037C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	13.52	□□□□□ -0.25	not detected
IDH1	YNL037C	UGA4	P32837	571 aa		13.52	□□□□□ -0.25
IDH1	YNL037C	YPL150W	Q12152	901 aa		13.52	□□□□□ -0.25
IDH1	YNL037C	PCT1	P13259	424 aa		13.51	□□□□□ -0.25
IDH1	YNL037C	SRO9	P25567	434 aa	Known RBP	13.51	□□□□□ -0.25
IDH1	YNL037C	VPS29	P38759	282 aa		13.51	□□□□□ -0.25
IDH1	YNL037C	NDT80	P38830	627 aa		13.51	□□□□□ -0.25
IDH1	YNL037C	ENT3	P47160	408 aa		13.51	□□□□□ -0.25
IDH1	YNL037C	BNI5	P53890	448 aa	Known RBP	13.51	□□□□□ -0.25
IDH1	YNL037C	FAR11	P53917	953 aa		13.51	□□□□□ -0.25
IDH1	YNL037C	RKM4	Q12504	494 aa		13.51	□□□□□ -0.25
IDH1	YNL037C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	13.5	□□□□□ -0.25	not detected
IDH1	YNL037C	SES1	P07284	462 aa	Known RBP	13.5	□□□□□ -0.25
IDH1	YNL037C	SEC8	P32855	1065 aa		13.5	□□□□□ -0.25
IDH1	YNL037C	SHP1	P34223	423 aa		13.5	□□□□□ -0.25
IDH1	YNL037C	PEX14	P53112	341 aa		13.5	□□□□□ -0.25
IDH1	YNL037C	GIS4	Q04233	774 aa		13.5	□□□□□ -0.25
IDH1	YNL037C	ISA1	Q07821	250 aa	Predicted RBP	13.5	□□□□□ -0.25
IDH1	YNL037C	HSP82	P02829	709 aa	Known RBP	13.49	□□□□□ -0.25
IDH1	YNL037C	CPA2	P03965	1118 aa	Known RBP	13.49	□□□□□ -0.25
IDH1	YNL037C	NPA3	P47122	385 aa		13.49	□□□□□ -0.25
IDH1	YNL037C	BUL2	Q03758	920 aa	Known RBP	13.49	□□□□□ -0.25
IDH1	YNL037C	ERP3	Q12403	225 aa		13.49	□□□□□ -0.25
IDH1	YNL037C	CDC6	P09119	513 aa		13.48	□□□□□ -0.25
IDH1	YNL037C	TKL1	P23254	680 aa	Known RBP	13.48	□□□□□ -0.25
IDH1	YNL037C	RFC5	P38251	354 aa		13.48	□□□□□ -0.25
IDH1	YNL037C	SUL1	P38359	859 aa		13.48	□□□□□ -0.25
IDH1	YNL037C	RET3	P53600	189 aa		13.48	□□□□□ -0.25
IDH1	YNL037C	SLD5	Q03406	294 aa		13.48	□□□□□ -0.25
IDH1	YNL037C	CSM3	Q04659	317 aa		13.48	□□□□□ -0.25
IDH1	YNL037C	SMD2	Q06217	110 aa	Known RBP	13.48	□□□□□ -0.25
IDH1	YNL037C	GET3	Q12154	354 aa	Known RBP	13.48	□□□□□ -0.25
IDH1	YNL037C	BIK1	P11709	440 aa		13.47	□□□□□ -0.25
IDH1	YNL037C	PGI1	P12709	554 aa	Known RBP	13.47	□□□□□ -0.25
IDH1	YNL037C	MCM4	P30665	933 aa	Known RBP	13.47	□□□□□ -0.25
IDH1	YNL037C	PAH1	P32567	862 aa		13.47	□□□□□ -0.25
IDH1	YNL037C	PRX1	P34227	261 aa	Known RBP	13.47	□□□□□ -0.25
IDH1	YNL037C	VPS53	P47061	822 aa		13.47	□□□□□ -0.25
IDH1	YNL037C	PTA1	Q01329	785 aa	Predicted RBP	13.47	□□□□□ -0.25
IDH1	YNL037C	OYE2	Q03558	400 aa	Known RBP	13.47	□□□□□ -0.25
IDH1	YNL037C	TIP41	Q12199	356 aa		13.47	□□□□□ -0.25
IDH1	YNL037C	THR4	P16120	514 aa	Known RBP	13.46	□□□□□ -0.25
IDH1	YNL037C	TFC4	P33339	1025 aa		13.46	□□□□□ -0.25
IDH1	YNL037C	MSC6	Q08818	692 aa	Known RBP	13.46	□□□□□ -0.25
IDH1	YNL037C	VPS1	P21576	704 aa	Known RBP	13.45	□□□□□ -0.26
IDH1	YNL037C	TIM23	P32897	222 aa		13.45	□□□□□ -0.26
IDH1	YNL037C	PIL1	P53252	339 aa	Known RBP	13.45	□□□□□ -0.26
IDH1	YNL037C	ULP1	Q02724	621 aa		13.45	□□□□□ -0.26
IDH1	YNL037C	YLR326W	Q06170	240 aa	Known RBP	13.45	□□□□□ -0.26
IDH1	YNL037C	OXR1	Q08952	273 aa		13.45	□□□□□ -0.26
IDH1	YNL037C	NBL1	Q3E7Y6	73 aa		13.45	□□□□□ -0.26
IDH1	YNL037C	REG2	P38232	338 aa		13.44	□□□□□ -0.26
IDH1	YNL037C	DSE4	P53753	1117 aa		13.44	□□□□□ -0.26
IDH1	YNL037C	DCS2	Q12123	353 aa		13.44	□□□□□ -0.26
IDH1	YNL037C	ARP6	Q12509	438 aa		13.44	□□□□□ -0.26
IDH1	YNL037C	DBP7	P36120	742 aa	Known RBP	13.43	□□□□□ -0.26
IDH1	YNL037C	HUL5	P53119	910 aa		13.43	□□□□□ -0.26
IDH1	YNL037C	LSP1	Q12230	341 aa	Known RBP	13.43	□□□□□ -0.26
IDH1	YNL037C	SDH2	P21801	266 aa		13.42	□□□□□ -0.26
IDH1	YNL037C	CLB5	P30283	435 aa		13.42	□□□□□ -0.26
IDH1	YNL037C	MAL33	P38157	468 aa		13.42	□□□□□ -0.26
IDH1	YNL037C	CIT3	P43635	486 aa		13.42	□□□□□ -0.26
IDH1	YNL037C	RTC4	P53850	401 aa		13.42	□□□□□ -0.26
IDH1	YNL037C	MFM1	Q02783	413 aa		13.42	□□□□□ -0.26
IDH1	YNL037C	TRM11	Q12463	433 aa		13.42	□□□□□ -0.26
IDH1	YNL037C	YUR1	P26725	428 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	ISW1	P38144	1129 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	STT3	P39007	718 aa	Known RBP	13.41	□□□□□ -0.26
IDH1	YNL037C	YJR107W	P47145	328 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	VPS62	P53285	467 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	YGR273C	P53329	174 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	CNM67	P53865	581 aa	Known RBP	13.41	□□□□□ -0.26
IDH1	YNL037C	ORC4	P54791	529 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	TRS120	Q04183	1289 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	SLK19	Q08581	821 aa	Known RBP	13.41	□□□□□ -0.26
IDH1	YNL037C	YOR296W	Q08748	1289 aa		13.41	□□□□□ -0.26
IDH1	YNL037C	YOR131C	Q12486	218 aa		13.41	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms