RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C DPH6Q12429 685 aa6.37□□□□□ -1.39
CUS1YMR240C TY4B-PA0A0B7P3V8 1104 aa6.36□□□□□ -1.39
CUS1YMR240C SAC7P17121 654 aa6.36□□□□□ -1.39
CUS1YMR240C SYP1P25623 870 aaKnown RBP6.36□□□□□ -1.39
CUS1YMR240C PGM2P37012 569 aaKnown RBP6.36□□□□□ -1.39
CUS1YMR240C PBP2P38151 413 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
CUS1YMR240C BRN1P38170 754 aa6.36□□□□□ -1.39
CUS1YMR240C FAR11P53917 953 aa6.36□□□□□ -1.39
CUS1YMR240C TY4A-HQ6Q5P6 413 aa6.36□□□□□ -1.39
CUS1YMR240C DED1P06634 604 aaKnown RBP6.35□□□□□ -1.39
CUS1YMR240C MRP8P35719 219 aa6.35□□□□□ -1.39
CUS1YMR240C ATG14P38270 344 aa6.35□□□□□ -1.39
CUS1YMR240C REI1P38344 393 aaPredicted RBP6.35□□□□□ -1.39
CUS1YMR240C TIM54P47045 478 aa6.35□□□□□ -1.39
CUS1YMR240C TIF35Q04067 274 aaKnown RBP6.35□□□□□ -1.39
CUS1YMR240C ELG1Q12050 791 aa6.35□□□□□ -1.39
CUS1YMR240C NHA1Q99271 985 aa6.35□□□□□ -1.39
CUS1YMR240C DBP5P20449 482 aaKnown RBP6.34□□□□□ -1.39
CUS1YMR240C SEA4P38164 1038 aa6.34□□□□□ -1.39
CUS1YMR240C CNN1P43618 361 aa6.34□□□□□ -1.39
CUS1YMR240C YLR225CQ05948 407 aaKnown RBP6.34□□□□□ -1.39
CUS1YMR240C SPO75Q07798 868 aa6.34□□□□□ -1.39
CUS1YMR240C RKM4Q12504 494 aa6.34□□□□□ -1.39
CUS1YMR240C INO1P11986 533 aa6.33□□□□□ -1.4
CUS1YMR240C ABD1P32783 436 aaPredicted RBP6.33□□□□□ -1.4
CUS1YMR240C AFG2P32794 780 aa6.33□□□□□ -1.4
CUS1YMR240C MAE1P36013 669 aaKnown RBP6.33□□□□□ -1.4
CUS1YMR240C RRP14P36080 434 aaKnown RBP6.33□□□□□ -1.4
CUS1YMR240C VBA5P36172 582 aa6.33□□□□□ -1.4
CUS1YMR240C YBR184WP38299 523 aa6.33□□□□□ -1.4
CUS1YMR240C RAT1Q02792 1006 aaKnown RBP6.33□□□□□ -1.4
CUS1YMR240C HPF1Q05164 967 aa6.33□□□□□ -1.4
CUS1YMR240C ESC2Q06340 456 aa6.33□□□□□ -1.4
CUS1YMR240C PPG1P32838 368 aa6.32□□□□□ -1.4
CUS1YMR240C STE5P32917 917 aa6.32□□□□□ -1.4
CUS1YMR240C PIN4P34217 668 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
CUS1YMR240C SPC42P36094 363 aa6.32□□□□□ -1.4
CUS1YMR240C YHR020WP38708 688 aaKnown RBP6.32□□□□□ -1.4
CUS1YMR240C YAR028WP39548 234 aa6.32□□□□□ -1.4
CUS1YMR240C SNF7P39929 240 aaKnown RBP6.32□□□□□ -1.4
CUS1YMR240C IRR1P40541 1150 aa6.32□□□□□ -1.4
CUS1YMR240C SPO74P45819 413 aa6.32□□□□□ -1.4
CUS1YMR240C DSE4P53753 1117 aa6.32□□□□□ -1.4
CUS1YMR240C PPM2Q08282 695 aa6.32□□□□□ -1.4
CUS1YMR240C ERS1P17261 260 aa6.31□□□□□ -1.4
CUS1YMR240C PBY1P38254 753 aa6.31□□□□□ -1.4
CUS1YMR240C RGD1P38339 666 aa6.31□□□□□ -1.4
CUS1YMR240C HNT2P49775 206 aa6.31□□□□□ -1.4
CUS1YMR240C ALG12P53730 551 aa6.31□□□□□ -1.4
CUS1YMR240C YMR074CQ04773 145 aa6.31□□□□□ -1.4
CUS1YMR240C FMP25Q08023 583 aa6.31□□□□□ -1.4
CUS1YMR240C AVO1Q08236 1176 aa6.31□□□□□ -1.4
CUS1YMR240C FLC1Q08967 793 aa6.31□□□□□ -1.4
CUS1YMR240C LAP2Q10740 671 aa6.31□□□□□ -1.4
CUS1YMR240C RPL8BP29453 256 aaKnown RBP6.3□□□□□ -1.4
CUS1YMR240C MOT2P34909 587 aaKnown RBP6.3□□□□□ -1.4
CUS1YMR240C ALG3P38179 458 aa6.3□□□□□ -1.4
CUS1YMR240C CHZ1P40019 153 aaPredicted RBP6.3□□□□□ -1.4
CUS1YMR240C MPH1P40562 993 aa6.3□□□□□ -1.4
CUS1YMR240C VPS53P47061 822 aa6.3□□□□□ -1.4
CUS1YMR240C YGR045CP53229 120 aa6.3□□□□□ -1.4
CUS1YMR240C YNR063WP53749 607 aa6.3□□□□□ -1.4
CUS1YMR240C ALG6Q12001 544 aaKnown RBP6.3□□□□□ -1.4
CUS1YMR240C OSH2Q12451 1283 aa6.3□□□□□ -1.4
CUS1YMR240C GBP2P25555 427 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
CUS1YMR240C YKL107WP34251 309 aa6.29□□□□□ -1.4
CUS1YMR240C HSE1P38753 452 aa6.29□□□□□ -1.4
CUS1YMR240C YGR035CP53222 116 aa6.29□□□□□ -1.4
CUS1YMR240C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4 RIP-Chip
CUS1YMR240C AOS1Q06624 347 aa6.29□□□□□ -1.4
CUS1YMR240C YOR223WQ12015 292 aa6.29□□□□□ -1.4
CUS1YMR240C SBP1P10080 294 aaKnown RBP6.28□□□□□ -1.4
CUS1YMR240C GGA2P38817 585 aaKnown RBP6.28□□□□□ -1.4
CUS1YMR240C RSP5P39940 809 aaKnown RBP6.28□□□□□ -1.4
CUS1YMR240C YGL176CP46945 554 aa6.28□□□□□ -1.4
CUS1YMR240C ERP6P53198 216 aa6.28□□□□□ -1.4
CUS1YMR240C YGR125WP53273 1036 aa6.28□□□□□ -1.4
CUS1YMR240C YPL066WQ12194 479 aa6.28□□□□□ -1.4
CUS1YMR240C PTC5Q12511 572 aa6.28□□□□□ -1.4
CUS1YMR240C CIT1P00890 479 aa6.27□□□□□ -1.41
CUS1YMR240C HSP60P19882 572 aaKnown RBP6.27□□□□□ -1.41
CUS1YMR240C PUF4P25339 888 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
CUS1YMR240C MCM7P38132 845 aa6.27□□□□□ -1.41
CUS1YMR240C PFD1P46988 109 aa6.27□□□□□ -1.41
CUS1YMR240C KIP3P53086 805 aaKnown RBP6.27□□□□□ -1.41
CUS1YMR240C UTP8P53276 713 aaKnown RBP6.27□□□□□ -1.41
CUS1YMR240C GAL11P19659 1081 aa6.26□□□□□ -1.41
CUS1YMR240C RRM3P38766 723 aa6.26□□□□□ -1.41
CUS1YMR240C QNS1P38795 714 aaKnown RBP6.26□□□□□ -1.41
CUS1YMR240C FPR3P38911 411 aaKnown RBP6.26□□□□□ -1.41
CUS1YMR240C NUP82P40368 713 aa6.26□□□□□ -1.41
CUS1YMR240C DOT1Q04089 582 aaKnown RBP6.26□□□□□ -1.41
CUS1YMR240C RSA3Q05942 220 aaKnown RBP6.26□□□□□ -1.41
CUS1YMR240C GNT1Q12096 491 aa6.26□□□□□ -1.41
CUS1YMR240C PRP9P19736 530 aaKnown RBP6.25□□□□□ -1.41
CUS1YMR240C MLS1P30952 554 aa6.25□□□□□ -1.41
CUS1YMR240C ELA1P53861 379 aaPredicted RBP6.25□□□□□ -1.41
CUS1YMR240C EAF1Q06337 982 aa6.25□□□□□ -1.41
CUS1YMR240C YPL260WQ08977 551 aa6.25□□□□□ -1.41
CUS1YMR240C TY1A-NL1Q12391 440 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms