RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C MSH4P40965 878 aaPredicted RBP6.41□□□□□ -1.38
ATG16YMR159C NOP7P53261 605 aaKnown RBP6.41□□□□□ -1.38
ATG16YMR159C ELA1P53861 379 aaPredicted RBP6.41□□□□□ -1.38
ATG16YMR159C MRL1Q06815 381 aa6.41□□□□□ -1.38
ATG16YMR159C TMA46Q12000 345 aaKnown RBP6.41□□□□□ -1.38
ATG16YMR159C CDC34P14682 295 aa6.4□□□□□ -1.38
ATG16YMR159C CLN2P20438 545 aa6.4□□□□□ -1.38
ATG16YMR159C NAM7P30771 971 aaKnown RBP6.4□□□□□ -1.38
ATG16YMR159C SMY2P32909 740 aaKnown RBP6.4□□□□□ -1.38
ATG16YMR159C HXT13P39924 564 aa6.4□□□□□ -1.38
ATG16YMR159C HXT17P53631 564 aa6.4□□□□□ -1.38
ATG16YMR159C HXT15P54854 567 aa6.4□□□□□ -1.38
ATG16YMR159C RAD27P26793 382 aa6.39□□□□□ -1.39
ATG16YMR159C AKR1P39010 764 aa6.39□□□□□ -1.39
ATG16YMR159C MET10P39692 1035 aa6.39□□□□□ -1.39
ATG16YMR159C ALT1P52893 592 aa6.39□□□□□ -1.39
ATG16YMR159C PIN2Q12057 282 aa6.39□□□□□ -1.39
ATG16YMR159C RPS4AP0CX35 261 aaKnown RBP6.38□□□□□ -1.39
ATG16YMR159C RPS4BP0CX36 261 aaKnown RBP6.38□□□□□ -1.39
ATG16YMR159C DUT1P33317 147 aa6.38□□□□□ -1.39
ATG16YMR159C KAE1P36132 386 aa6.38□□□□□ -1.39
ATG16YMR159C VPS53P47061 822 aa6.38□□□□□ -1.39
ATG16YMR159C VPS16Q03308 798 aa6.38□□□□□ -1.39
ATG16YMR159C JIP5Q06214 492 aaPredicted RBP6.38□□□□□ -1.39
ATG16YMR159C YLR122CQ12312 125 aa6.38□□□□□ -1.39
ATG16YMR159C CHS2P14180 963 aa6.37□□□□□ -1.39
ATG16YMR159C MSB1P21339 1137 aaKnown RBP6.37□□□□□ -1.39
ATG16YMR159C NFS1P25374 497 aa6.37□□□□□ -1.39
ATG16YMR159C MKK2P32491 506 aa6.37□□□□□ -1.39
ATG16YMR159C AFG2P32794 780 aa6.37□□□□□ -1.39
ATG16YMR159C MAD1P40957 749 aa6.37□□□□□ -1.39
ATG16YMR159C ROD1Q02805 837 aa6.37□□□□□ -1.39
ATG16YMR159C RSA3Q05942 220 aaKnown RBP6.37□□□□□ -1.39
ATG16YMR159C YOR059CQ08448 450 aaKnown RBP6.37□□□□□ -1.39
ATG16YMR159C RET1P22276 1149 aaKnown RBP6.36□□□□□ -1.39
ATG16YMR159C MMM1P41800 426 aa6.36□□□□□ -1.39
ATG16YMR159C YNR063WP53749 607 aa6.36□□□□□ -1.39
ATG16YMR159C QNS1P38795 714 aaKnown RBP6.35□□□□□ -1.39
ATG16YMR159C CIT3P43635 486 aa6.35□□□□□ -1.39
ATG16YMR159C YLR257WQ06146 321 aaKnown RBP6.35□□□□□ -1.39
ATG16YMR159C SYP1P25623 870 aaKnown RBP6.34□□□□□ -1.39
ATG16YMR159C RER2P35196 286 aa6.34□□□□□ -1.39
ATG16YMR159C YGR053CP53234 283 aa6.34□□□□□ -1.39
ATG16YMR159C HRK1Q08732 759 aaKnown RBP6.34□□□□□ -1.39
ATG16YMR159C DED1P06634 604 aaKnown RBP6.33□□□□□ -1.4
ATG16YMR159C ALG3P38179 458 aa6.33□□□□□ -1.4
ATG16YMR159C EEB1Q02891 456 aa6.33□□□□□ -1.4
ATG16YMR159C PUS7Q08647 676 aaKnown RBP6.33□□□□□ -1.4
ATG16YMR159C PTC5Q12511 572 aa6.33□□□□□ -1.4
ATG16YMR159C DBP5P20449 482 aaKnown RBP6.32□□□□□ -1.4
ATG16YMR159C RGD1P38339 666 aa6.32□□□□□ -1.4
ATG16YMR159C CNN1P43618 361 aa6.32□□□□□ -1.4
ATG16YMR159C RAT1Q02792 1006 aaKnown RBP6.32□□□□□ -1.4
ATG16YMR159C MAG2Q06436 670 aaKnown RBP6.32□□□□□ -1.4
ATG16YMR159C YPL260WQ08977 551 aa6.32□□□□□ -1.4
ATG16YMR159C LYP1P32487 611 aa6.31□□□□□ -1.4
ATG16YMR159C WHI3P34761 661 aaKnown RBP6.31□□□□□ -1.4
ATG16YMR159C RCM1P53972 490 aa6.31□□□□□ -1.4
ATG16YMR159C EAR1Q03212 550 aa6.31□□□□□ -1.4
ATG16YMR159C TPP1Q03796 238 aa6.31□□□□□ -1.4
ATG16YMR159C YVC1Q12324 675 aa6.31□□□□□ -1.4
ATG16YMR159C MED7Q08278 222 aa6.3□□□□□ -1.4
ATG16YMR159C NSI1Q12457 570 aa6.3□□□□□ -1.4
ATG16YMR159C TRP2P00899 507 aaKnown RBP6.29□□□□□ -1.4
ATG16YMR159C KIP1P28742 1111 aa6.29□□□□□ -1.4
ATG16YMR159C OYE3P41816 400 aaPredicted RBP6.29□□□□□ -1.4
ATG16YMR159C FAA4P47912 694 aaKnown RBP6.29□□□□□ -1.4
ATG16YMR159C YGR130CP53278 816 aa6.29□□□□□ -1.4
ATG16YMR159C CWC24P53769 259 aa6.29□□□□□ -1.4
ATG16YMR159C GDE1Q02979 1223 aa6.29□□□□□ -1.4
ATG16YMR159C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
ATG16YMR159C TRP3P00937 484 aa6.28□□□□□ -1.4
ATG16YMR159C SBP1P10080 294 aaKnown RBP6.28□□□□□ -1.4
ATG16YMR159C RPN3P40016 523 aaKnown RBP6.28□□□□□ -1.4
ATG16YMR159C MPH1P40562 993 aa6.28□□□□□ -1.4
ATG16YMR159C KRI1P42846 591 aaKnown RBP6.28□□□□□ -1.4
ATG16YMR159C HNT2P49775 206 aa6.28□□□□□ -1.4
ATG16YMR159C TYW3P53177 273 aa6.28□□□□□ -1.4
ATG16YMR159C TIF35Q04067 274 aaKnown RBP6.28□□□□□ -1.4
ATG16YMR159C CYC7P00045 113 aa6.27□□□□□ -1.41
ATG16YMR159C YJL045WP47052 634 aa6.27□□□□□ -1.41
ATG16YMR159C ALD6P54115 500 aaKnown RBP6.27□□□□□ -1.41
ATG16YMR159C SRO9P25567 434 aaKnown RBP6.26□□□□□ -1.41
ATG16YMR159C YSC84P32793 468 aa6.26□□□□□ -1.41
ATG16YMR159C YKR073CP36153 106 aa6.26□□□□□ -1.41
ATG16YMR159C PEX7P39108 375 aa6.26□□□□□ -1.41
ATG16YMR159C VAC8P39968 578 aa6.26□□□□□ -1.41
ATG16YMR159C SPO20Q04359 397 aa6.26□□□□□ -1.41
ATG16YMR159C TRE1Q08919 783 aa6.26□□□□□ -1.41
ATG16YMR159C SPO21Q12411 609 aa6.26□□□□□ -1.41
ATG16YMR159C RKM4Q12504 494 aa6.26□□□□□ -1.41
ATG16YMR159C SAM35P14693 329 aa6.25□□□□□ -1.41
ATG16YMR159C MLS1P30952 554 aa6.25□□□□□ -1.41
ATG16YMR159C NMD3P38861 518 aaKnown RBP6.25□□□□□ -1.41
ATG16YMR159C HOS3Q02959 697 aaKnown RBP6.25□□□□□ -1.41
ATG16YMR159C AOS1Q06624 347 aa6.25□□□□□ -1.41
ATG16YMR159C GNT1Q12096 491 aa6.25□□□□□ -1.41
ATG16YMR159C PUB1P32588 453 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
ATG16YMR159C MDL2P33311 773 aa6.24□□□□□ -1.41
ATG16YMR159C BAP2P38084 609 aa6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 119.3 ms