RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	SLS1	P42900	643 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	YNR063W	P53749	607 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	YLR257W	Q06146	321 aa	Known RBP	4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-GR1	Q12085	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-OL	Q92392	440 aa	Known RBP	4.13	□□□□□ -1.75
UBC7	YMR022W	MDL2	P33311	773 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	LRG1	P35688	1017 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	ADD66	P36040	267 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	GTS1	P40956	396 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	ENV11	P53246	860 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	ORC3	P54790	616 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
UBC7	YMR022W	ULP1	Q02724	621 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	RKM2	Q03942	479 aa		4.12	□□□□□ -1.75
UBC7	YMR022W	UTP5	Q04177	643 aa	Known RBP	4.12	□□□□□ -1.75
UBC7	YMR022W	PHO4	P07270	312 aa	Known RBP	4.11	□□□□□ -1.75
UBC7	YMR022W	PRE9	P23638	258 aa	Known RBP	4.11	□□□□□ -1.75
UBC7	YMR022W	RNQ1	P25367	405 aa		4.11	□□□□□ -1.75
UBC7	YMR022W	CCZ1	P38273	704 aa		4.11	□□□□□ -1.75
UBC7	YMR022W	MGE1	P38523	228 aa		4.11	□□□□□ -1.75
UBC7	YMR022W	PEX28	P38848	579 aa		4.11	□□□□□ -1.75
UBC7	YMR022W	EAR1	Q03212	550 aa		4.11	□□□□□ -1.75
UBC7	YMR022W	ADI1	Q03677	179 aa		4.11	□□□□□ -1.75
UBC7	YMR022W	TAF7	Q05021	590 aa		4.11	□□□□□ -1.75
UBC7	YMR022W	RSA3	Q05942	220 aa	Known RBP	4.11	□□□□□ -1.75
UBC7	YMR022W	COQ4	O13525	335 aa		4.1	□□□□□ -1.75
UBC7	YMR022W	TAF13	P11747	167 aa		4.1	□□□□□ -1.75
UBC7	YMR022W	RPT1	P33299	467 aa	Known RBP	4.1	□□□□□ -1.75
UBC7	YMR022W	NEM1	P38757	446 aa		4.1	□□□□□ -1.75
UBC7	YMR022W	PEX7	P39108	375 aa		4.1	□□□□□ -1.75
UBC7	YMR022W	DAK2	P43550	591 aa		4.1	□□□□□ -1.75
UBC7	YMR022W	SRO9	P25567	434 aa	Known RBP	4.09	□□□□□ -1.75
UBC7	YMR022W	AIM26	P32858	118 aa		4.09	□□□□□ -1.75
UBC7	YMR022W	MRPS18	P42847	217 aa		4.09	□□□□□ -1.75
UBC7	YMR022W	SNO2	P53823	222 aa		4.09	□□□□□ -1.75
UBC7	YMR022W	MCD1	Q12158	566 aa		4.09	□□□□□ -1.75
UBC7	YMR022W	YKL222C	P35995	705 aa		4.08	□□□□□ -1.76
UBC7	YMR022W	QNS1	P38795	714 aa	Known RBP	4.08	□□□□□ -1.76
UBC7	YMR022W	EST2	Q06163	884 aa		4.08	□□□□□ -1.76
UBC7	YMR022W	RSB1	Q08417	382 aa		4.08	□□□□□ -1.76
UBC7	YMR022W	SPS1	P08458	490 aa		4.07	□□□□□ -1.76
UBC7	YMR022W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
UBC7	YMR022W	MET4	P32389	672 aa		4.07	□□□□□ -1.76
UBC7	YMR022W	SEA4	P38164	1038 aa		4.07	□□□□□ -1.76
UBC7	YMR022W	MRPL22	P53881	309 aa		4.07	□□□□□ -1.76
UBC7	YMR022W	SEC23	P15303	768 aa	Known RBP	4.06	□□□□□ -1.76
UBC7	YMR022W	NMD3	P38861	518 aa	Known RBP	4.06	□□□□□ -1.76
UBC7	YMR022W	YGL140C	P53120	1219 aa		4.06	□□□□□ -1.76
UBC7	YMR022W	PTC5	Q12511	572 aa		4.06	□□□□□ -1.76
UBC7	YMR022W	DED1	P06634	604 aa	Known RBP	4.05	□□□□□ -1.76
UBC7	YMR022W	YSC84	P32793	468 aa		4.05	□□□□□ -1.76
UBC7	YMR022W	UGA4	P32837	571 aa		4.05	□□□□□ -1.76
UBC7	YMR022W	YJL045W	P47052	634 aa		4.05	□□□□□ -1.76
UBC7	YMR022W	HNT2	P49775	206 aa		4.05	□□□□□ -1.76
UBC7	YMR022W	YPL109C	Q02981	657 aa		4.05	□□□□□ -1.76
UBC7	YMR022W	IPL1	P38991	367 aa		4.04	□□□□□ -1.76
UBC7	YMR022W	YGR122W	P53272	402 aa		4.04	□□□□□ -1.76
UBC7	YMR022W	TNA1	P53322	534 aa		4.04	□□□□□ -1.76
UBC7	YMR022W	HOS3	Q02959	697 aa	Known RBP	4.04	□□□□□ -1.76
UBC7	YMR022W	YPL260W	Q08977	551 aa		4.04	□□□□□ -1.76
UBC7	YMR022W	LPX1	Q12405	387 aa	Known RBP	4.04	□□□□□ -1.76
UBC7	YMR022W	WHI5	Q12416	295 aa		4.04	□□□□□ -1.76
UBC7	YMR022W	SAM35	P14693	329 aa		4.03	□□□□□ -1.76
UBC7	YMR022W	PRP6	P19735	899 aa	Predicted RBP	4.03	□□□□□ -1.76
UBC7	YMR022W	RAD27	P26793	382 aa		4.03	□□□□□ -1.76
UBC7	YMR022W	ASF1	P32447	279 aa		4.03	□□□□□ -1.76
UBC7	YMR022W	ETP1	P38748	585 aa	Known RBP	4.03	□□□□□ -1.76
UBC7	YMR022W	ENT3	P47160	408 aa		4.03	□□□□□ -1.76
UBC7	YMR022W	RIM8	P53179	542 aa		4.03	□□□□□ -1.76
UBC7	YMR022W	RSC58	Q07979	502 aa		4.03	□□□□□ -1.76
UBC7	YMR022W	HXK1	P04806	485 aa	Known RBP	4.02	□□□□□ -1.77
UBC7	YMR022W	KIP1	P28742	1111 aa		4.02	□□□□□ -1.77
UBC7	YMR022W	RDH54	P38086	958 aa		4.02	□□□□□ -1.77
UBC7	YMR022W	FAA3	P39002	694 aa		4.02	□□□□□ -1.77
UBC7	YMR022W	CDA2	Q06703	312 aa		4.02	□□□□□ -1.77
UBC7	YMR022W	ALG3	P38179	458 aa		4.01	□□□□□ -1.77
UBC7	YMR022W	AIM3	P38266	947 aa	Known RBP	4.01	□□□□□ -1.77
UBC7	YMR022W	RPN3	P40016	523 aa	Known RBP	4.01	□□□□□ -1.77
UBC7	YMR022W	SEC26	P41810	973 aa	Known RBP	4.01	□□□□□ -1.77
UBC7	YMR022W	POL32	P47110	350 aa		4.01	□□□□□ -1.77
UBC7	YMR022W	ESC8	Q08119	714 aa		4.01	□□□□□ -1.77
UBC7	YMR022W	YLR358C	O13565	187 aa		4	□□□□□ -1.77
UBC7	YMR022W	SOD2	P00447	233 aa		4	□□□□□ -1.77
UBC7	YMR022W	RPS13	P05756	151 aa	Known RBP	4	□□□□□ -1.77
UBC7	YMR022W	RAD2	P07276	1031 aa		4	□□□□□ -1.77
UBC7	YMR022W	TSA1	P34760	196 aa	Known RBP	4	□□□□□ -1.77
UBC7	YMR022W	PIK1	P39104	1066 aa		4	□□□□□ -1.77
UBC7	YMR022W	RSM24	Q03976	319 aa		4	□□□□□ -1.77
UBC7	YMR022W	MRL1	Q06815	381 aa		4	□□□□□ -1.77
UBC7	YMR022W	SPO21	Q12411	609 aa		4	□□□□□ -1.77
UBC7	YMR022W	YCR015C	P25616	317 aa		3.99	□□□□□ -1.77
UBC7	YMR022W	SEC8	P32855	1065 aa		3.99	□□□□□ -1.77
UBC7	YMR022W	SIW14	P53965	281 aa		3.99	□□□□□ -1.77
UBC7	YMR022W	URN1	Q06525	465 aa	Known RBP	3.99	□□□□□ -1.77
UBC7	YMR022W	KIN2	P13186	1147 aa	Known RBP	3.98	□□□□□ -1.77
UBC7	YMR022W	HEM3	P28789	327 aa		3.98	□□□□□ -1.77
UBC7	YMR022W	PEP7	P32609	515 aa		3.98	□□□□□ -1.77
UBC7	YMR022W	TOD6	P34219	525 aa		3.98	□□□□□ -1.77
UBC7	YMR022W	RFC5	P38251	354 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms