RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W JIP4Q03361 876 aa4.43□□□□□ -1.7
USA1YML029W YML037CQ03703 340 aa4.43□□□□□ -1.7
USA1YML029W YDR341CQ05506 607 aaKnown RBP4.43□□□□□ -1.7
USA1YML029W UBX5Q06682 500 aa4.43□□□□□ -1.7
USA1YML029W ISA1Q07821 250 aaPredicted RBP4.43□□□□□ -1.7
USA1YML029W ELG1Q12050 791 aa4.43□□□□□ -1.7
USA1YML029W RPL19AP0CX82 189 aaKnown RBP4.42□□□□□ -1.7
USA1YML029W RPL19BP0CX83 189 aaPredicted RBP4.42□□□□□ -1.7
USA1YML029W RAD18P10862 487 aa4.42□□□□□ -1.7
USA1YML029W VMA2P16140 517 aaKnown RBP4.42□□□□□ -1.7
USA1YML029W ASH1P34233 588 aa4.42□□□□□ -1.7
USA1YML029W PNT1P38969 423 aa4.42□□□□□ -1.7
USA1YML029W RTC4P53850 401 aa4.42□□□□□ -1.7
USA1YML029W ARP5P53946 755 aa4.42□□□□□ -1.7
USA1YML029W SPH1Q06160 661 aa4.42□□□□□ -1.7
USA1YML029W SRP54P20424 541 aaKnown RBP4.42□□□□□ -1.7
USA1YML029W MCM3P24279 971 aaKnown RBP4.42□□□□□ -1.7
USA1YML029W TGL1P34163 548 aa4.42□□□□□ -1.7
USA1YML029W RXT2P38255 430 aa4.42□□□□□ -1.7
USA1YML029W SNF7P39929 240 aaKnown RBP4.42□□□□□ -1.7
USA1YML029W RET3P53600 189 aa4.42□□□□□ -1.7
USA1YML029W TIP41Q12199 356 aa4.42□□□□□ -1.7
USA1YML029W MYO1P08964 1928 aa4.42□□□□□ -1.7
USA1YML029W RPL8AP17076 256 aaKnown RBP4.41□□□□□ -1.7
USA1YML029W YDJ1P25491 409 aaKnown RBP4.41□□□□□ -1.7
USA1YML029W EUG1P32474 517 aa4.41□□□□□ -1.7
USA1YML029W CDC27P38042 758 aa4.41□□□□□ -1.7
USA1YML029W RFT1P38206 574 aaPredicted RBP4.41□□□□□ -1.7
USA1YML029W CTF18P49956 741 aa4.41□□□□□ -1.7
USA1YML029W PEX14P53112 341 aa4.41□□□□□ -1.7
USA1YML029W YGL138CP53122 345 aa4.41□□□□□ -1.7
USA1YML029W CNM67P53865 581 aaKnown RBP4.41□□□□□ -1.7
USA1YML029W ETT1Q08421 412 aaKnown RBP4.41□□□□□ -1.7
USA1YML029W ICL2Q12031 575 aa4.41□□□□□ -1.7
USA1YML029W PRO3P32263 286 aaKnown RBP4.41□□□□□ -1.7
USA1YML029W UGA4P32837 571 aa4.41□□□□□ -1.7
USA1YML029W RGT1P32862 1170 aa4.41□□□□□ -1.7
USA1YML029W SAS3P34218 831 aa4.41□□□□□ -1.7
USA1YML029W BDH2P39713 417 aa4.41□□□□□ -1.7
USA1YML029W HMF1P40037 129 aaKnown RBP4.41□□□□□ -1.7
USA1YML029W BUD6P41697 788 aa4.41□□□□□ -1.7
USA1YML029W ROG3P43602 733 aa4.41□□□□□ -1.7
USA1YML029W YJL007CP47080 104 aa4.41□□□□□ -1.7
USA1YML029W HDA1P53973 706 aa4.41□□□□□ -1.7
USA1YML029W CSC1Q06538 782 aa4.41□□□□□ -1.7
USA1YML029W CIT1P00890 479 aa4.4□□□□□ -1.7
USA1YML029W BIK1P11709 440 aa4.4□□□□□ -1.7
USA1YML029W SWI4P25302 1093 aaKnown RBP4.4□□□□□ -1.7
USA1YML029W COQ8P27697 501 aa4.4□□□□□ -1.7
USA1YML029W RME1P32338 300 aaKnown RBP4.4□□□□□ -1.7
USA1YML029W PHO88P38264 188 aaPredicted RBP4.4□□□□□ -1.7
USA1YML029W PAN5P38787 379 aa4.4□□□□□ -1.7
USA1YML029W AKR1P39010 764 aa4.4□□□□□ -1.7
USA1YML029W YCK3P39962 524 aa4.4□□□□□ -1.7
USA1YML029W RRD1P40454 393 aaKnown RBP4.4□□□□□ -1.7
USA1YML029W CSM2P40465 213 aa4.4□□□□□ -1.7
USA1YML029W LIF1P53150 421 aa4.4□□□□□ -1.7
USA1YML029W OYE2Q03558 400 aaKnown RBP4.4□□□□□ -1.7
USA1YML029W MET7Q08645 548 aa4.4□□□□□ -1.7
USA1YML029W FBP1P09201 348 aa4.4□□□□□ -1.71
USA1YML029W EAF7P53911 425 aaKnown RBP4.4□□□□□ -1.71
USA1YML029W CSM3Q04659 317 aa4.4□□□□□ -1.71
USA1YML029W HRQ1Q05549 1077 aa4.4□□□□□ -1.71
USA1YML029W YOR111WQ99210 232 aa4.4□□□□□ -1.71
USA1YML029W CKA2P19454 339 aa4.39□□□□□ -1.71
USA1YML029W MCM4P30665 933 aaKnown RBP4.39□□□□□ -1.71
USA1YML029W ELM1P32801 640 aa4.39□□□□□ -1.71
USA1YML029W MCR1P36060 302 aaKnown RBP4.39□□□□□ -1.71
USA1YML029W RPN10P38886 268 aaKnown RBP4.39□□□□□ -1.71
USA1YML029W ATG32P40458 529 aa4.39□□□□□ -1.71
USA1YML029W DJP1P40564 432 aa4.39□□□□□ -1.71
USA1YML029W HST1P53685 503 aa4.39□□□□□ -1.71
USA1YML029W CPA2P03965 1118 aaKnown RBP4.39□□□□□ -1.71
USA1YML029W MET6P05694 767 aaKnown RBP4.39□□□□□ -1.71
USA1YML029W SAM2P19358 384 aaKnown RBP4.39□□□□□ -1.71
USA1YML029W PRX1P34227 261 aaKnown RBP4.39□□□□□ -1.71
USA1YML029W VPS29P38759 282 aa4.39□□□□□ -1.71
USA1YML029W PCI8P40512 444 aa4.39□□□□□ -1.71
USA1YML029W REF2P42073 533 aaPredicted RBP4.39□□□□□ -1.71
USA1YML029W EPL1P43572 832 aa4.39□□□□□ -1.71
USA1YML029W VPS53P47061 822 aa4.39□□□□□ -1.71
USA1YML029W PTA1Q01329 785 aaPredicted RBP4.39□□□□□ -1.71
USA1YML029W NBL1Q3E7Y6 73 aa4.39□□□□□ -1.71
USA1YML029W THR4P16120 514 aaKnown RBP4.38□□□□□ -1.71
USA1YML029W ALG1P16661 449 aa4.38□□□□□ -1.71
USA1YML029W MSP1P28737 362 aa4.38□□□□□ -1.71
USA1YML029W ENT3P47160 408 aa4.38□□□□□ -1.71
USA1YML029W ATG1P53104 897 aa4.38□□□□□ -1.71
USA1YML029W HUL5P53119 910 aa4.38□□□□□ -1.71
USA1YML029W MFM1Q02783 413 aa4.38□□□□□ -1.71
USA1YML029W FMP30Q02883 468 aa4.38□□□□□ -1.71
USA1YML029W PHM6Q05637 104 aa4.38□□□□□ -1.71
USA1YML029W SES1P07284 462 aaKnown RBP4.38□□□□□ -1.71
USA1YML029W CLB5P30283 435 aa4.38□□□□□ -1.71
USA1YML029W FMS1P50264 508 aa4.38□□□□□ -1.71
USA1YML029W YGL081WP53156 320 aa4.38□□□□□ -1.71
USA1YML029W BNI5P53890 448 aaKnown RBP4.38□□□□□ -1.71
USA1YML029W HAP5Q02516 242 aa4.38□□□□□ -1.71
USA1YML029W BUL2Q03758 920 aaKnown RBP4.38□□□□□ -1.71
USA1YML029W FUS2Q05670 677 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms