RNA–Protein interactions for RNA: YLR178C

TFS1, Transcript of Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p), yeastyeast

Gene TFS1, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFS1YLR178C RMD1Q03441 430 aa6.49□□□□□ -1.37
TFS1YLR178C ECM16Q04217 1267 aaKnown RBP6.49□□□□□ -1.37
TFS1YLR178C TSC13Q99190 310 aa6.49□□□□□ -1.37
TFS1YLR178C CYB2P00175 591 aa6.48□□□□□ -1.37
TFS1YLR178C ECM21P38167 1117 aaKnown RBP6.48□□□□□ -1.37
TFS1YLR178C TPS3P38426 1054 aaKnown RBP6.48□□□□□ -1.37
TFS1YLR178C HAL5P38970 855 aaKnown RBP6.48□□□□□ -1.37
TFS1YLR178C ISR1Q06098 443 aaKnown RBP6.48□□□□□ -1.37
TFS1YLR178C NIT1P40447 199 aa6.47□□□□□ -1.37
TFS1YLR178C BRE1Q07457 700 aaKnown RBP6.47□□□□□ -1.37
TFS1YLR178C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
TFS1YLR178C MRF1P30775 413 aaPredicted RBP6.46□□□□□ -1.38
TFS1YLR178C RRP8P38961 392 aaKnown RBP6.46□□□□□ -1.38
TFS1YLR178C STM1P39015 273 aaKnown RBP6.46□□□□□ -1.38
TFS1YLR178C YMR147WP40218 223 aaKnown RBP6.46□□□□□ -1.38
TFS1YLR178C IRC8P47046 822 aa6.46□□□□□ -1.38
TFS1YLR178C MTC3P53077 123 aa6.46□□□□□ -1.38
TFS1YLR178C RRT6P53117 311 aaPredicted RBP6.46□□□□□ -1.38
TFS1YLR178C ALO1P54783 526 aaKnown RBP6.46□□□□□ -1.38
TFS1YLR178C NKP2Q06162 153 aa6.46□□□□□ -1.38
TFS1YLR178C YBL113CQ7M4S9 792 aa6.46□□□□□ -1.38
TFS1YLR178C PMA1P05030 918 aaKnown RBP6.45□□□□□ -1.38
TFS1YLR178C ADP1P25371 1049 aa6.45□□□□□ -1.38
TFS1YLR178C KIP2P28743 706 aa6.45□□□□□ -1.38
TFS1YLR178C KTR3P38130 404 aaPredicted RBP6.45□□□□□ -1.38
TFS1YLR178C BSD2P38356 321 aa6.45□□□□□ -1.38
TFS1YLR178C OSH3P38713 996 aaKnown RBP6.45□□□□□ -1.38
TFS1YLR178C UTP7P40055 554 aaKnown RBP6.45□□□□□ -1.38
TFS1YLR178C SNF3P10870 884 aa6.44□□□□□ -1.38
TFS1YLR178C MIP1P15801 1254 aa6.44□□□□□ -1.38
TFS1YLR178C GRX7P38068 203 aa6.44□□□□□ -1.38
TFS1YLR178C ERP5P38819 212 aa6.44□□□□□ -1.38
TFS1YLR178C PNT1P38969 423 aa6.44□□□□□ -1.38
TFS1YLR178C SLN1P39928 1220 aaPredicted RBP6.44□□□□□ -1.38
TFS1YLR178C NOP2P40991 618 aaKnown RBP6.44□□□□□ -1.38
TFS1YLR178C YFL034WP43564 1073 aa6.44□□□□□ -1.38
TFS1YLR178C KAR5Q04746 504 aa6.44□□□□□ -1.38
TFS1YLR178C HDA3Q06623 655 aa6.44□□□□□ -1.38
TFS1YLR178C CSR2Q12734 1121 aa6.44□□□□□ -1.38
TFS1YLR178C VAS1P07806 1104 aaKnown RBP6.43□□□□□ -1.38
TFS1YLR178C SDH2P21801 266 aa6.43□□□□□ -1.38
TFS1YLR178C HEM3P28789 327 aa6.43□□□□□ -1.38
TFS1YLR178C YBL028CP38202 106 aa6.43□□□□□ -1.38
TFS1YLR178C AIM9P40053 627 aaKnown RBP6.43□□□□□ -1.38
TFS1YLR178C IOC3P43596 787 aa6.43□□□□□ -1.38
TFS1YLR178C PNP1Q05788 311 aa6.43□□□□□ -1.38
TFS1YLR178C MRD1Q06106 887 aaKnown RBP6.43□□□□□ -1.38
TFS1YLR178C KEL3Q08979 651 aaPredicted RBP6.43□□□□□ -1.38
TFS1YLR178C GIN4Q12263 1142 aa6.43□□□□□ -1.38
TFS1YLR178C RAD50P12753 1312 aa6.43□□□□□ -1.38
TFS1YLR178C CDC16P09798 840 aa6.42□□□□□ -1.38
TFS1YLR178C RAD53P22216 821 aa6.42□□□□□ -1.38
TFS1YLR178C VAN1P23642 535 aa6.42□□□□□ -1.38
TFS1YLR178C ETP1P38748 585 aaKnown RBP6.42□□□□□ -1.38
TFS1YLR178C MSH4P40965 878 aaPredicted RBP6.42□□□□□ -1.38
TFS1YLR178C EMW1P42842 904 aaKnown RBP6.42□□□□□ -1.38
TFS1YLR178C SNU71P53207 620 aaKnown RBP6.42□□□□□ -1.38
TFS1YLR178C PUN1Q06991 263 aa6.42□□□□□ -1.38
TFS1YLR178C PCL8Q08966 492 aa6.42□□□□□ -1.38
TFS1YLR178C YPL260WQ08977 551 aa6.42□□□□□ -1.38
TFS1YLR178C TIF6Q12522 245 aaKnown RBP6.42□□□□□ -1.38
TFS1YLR178C TRL1P09880 827 aaKnown RBP6.41□□□□□ -1.38
TFS1YLR178C SRS2P12954 1174 aa6.41□□□□□ -1.38
TFS1YLR178C PFK2P16862 959 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
TFS1YLR178C TPM1P17536 199 aaKnown RBP6.41□□□□□ -1.38
TFS1YLR178C VRP1P37370 817 aa6.41□□□□□ -1.38
TFS1YLR178C KEL1P38853 1164 aaKnown RBP6.41□□□□□ -1.38
TFS1YLR178C MRPS35P53292 345 aa6.41□□□□□ -1.38
TFS1YLR178C DUS1P53759 423 aaKnown RBP6.41□□□□□ -1.38
TFS1YLR178C SYH1Q02875 849 aaKnown RBP6.41□□□□□ -1.38
TFS1YLR178C FPR4Q06205 392 aaPredicted RBP6.41□□□□□ -1.38
TFS1YLR178C YDL124WQ07551 312 aaKnown RBP6.41□□□□□ -1.38
TFS1YLR178C TAH18Q12181 623 aa6.41□□□□□ -1.38
TFS1YLR178C PIB2P53191 635 aa6.4□□□□□ -1.38
TFS1YLR178C NSG2P53898 299 aa6.4□□□□□ -1.38
TFS1YLR178C FLO1P32768 1537 aa6.4□□□□□ -1.39
TFS1YLR178C HVG1P0CE11 249 aa6.39□□□□□ -1.39
TFS1YLR178C OPI1P21957 404 aa6.39□□□□□ -1.39
TFS1YLR178C MET1P36150 593 aa6.39□□□□□ -1.39
TFS1YLR178C CST26P38226 397 aa6.39□□□□□ -1.39
TFS1YLR178C BOL3P39724 118 aa6.39□□□□□ -1.39
TFS1YLR178C ACA1P39970 489 aa6.39□□□□□ -1.39
TFS1YLR178C MDJ2P42834 146 aa6.39□□□□□ -1.39
TFS1YLR178C RBA50Q04418 439 aa6.39□□□□□ -1.39
TFS1YLR178C RIM20Q12033 661 aa6.39□□□□□ -1.39
TFS1YLR178C TRS33Q99394 268 aa6.39□□□□□ -1.39
TFS1YLR178C OCT1P35999 772 aa6.38□□□□□ -1.39
TFS1YLR178C APE3P37302 537 aaKnown RBP6.38□□□□□ -1.39
TFS1YLR178C RTS1P38903 757 aa6.38□□□□□ -1.39
TFS1YLR178C SSF2Q12153 453 aaPredicted RBP6.38□□□□□ -1.39
TFS1YLR178C GSC2P40989 1895 aa6.37□□□□□ -1.39
TFS1YLR178C TUB2P02557 457 aaKnown RBP6.37□□□□□ -1.39
TFS1YLR178C SPT2P06843 333 aaPredicted RBP6.37□□□□□ -1.39
TFS1YLR178C RPS6AP0CX37 236 aaKnown RBP6.37□□□□□ -1.39
TFS1YLR178C RPS6BP0CX38 236 aaPredicted RBP6.37□□□□□ -1.39
TFS1YLR178C PRE8P23639 250 aa6.37□□□□□ -1.39
TFS1YLR178C SEC20P28791 383 aa6.37□□□□□ -1.39
TFS1YLR178C MCD4P36051 919 aa6.37□□□□□ -1.39
TFS1YLR178C GRS1P38088 690 aaKnown RBP6.37□□□□□ -1.39
TFS1YLR178C VPS8P39702 1274 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms