RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C MET10P39692 1035 aa6.14□□□□□ -1.43
USB1YLR132C OYE2Q03558 400 aaKnown RBP6.14□□□□□ -1.43
USB1YLR132C DAL4Q04895 635 aa6.14□□□□□ -1.43
USB1YLR132C DFG16Q99234 619 aa6.14□□□□□ -1.43
USB1YLR132C SEC8P32855 1065 aa6.13□□□□□ -1.43
USB1YLR132C HSP78P33416 811 aa6.13□□□□□ -1.43
USB1YLR132C SEG2P34250 1132 aa6.13□□□□□ -1.43
USB1YLR132C MTR4P47047 1073 aaKnown RBP6.13□□□□□ -1.43
USB1YLR132C PEX13P80667 386 aa6.13□□□□□ -1.43
USB1YLR132C ULP1Q02724 621 aa6.13□□□□□ -1.43
USB1YLR132C UTP5Q04177 643 aaKnown RBP6.13□□□□□ -1.43
USB1YLR132C SVF1Q05515 481 aa6.13□□□□□ -1.43
USB1YLR132C RRP15Q06511 250 aaPredicted RBP6.13□□□□□ -1.43
USB1YLR132C TRE1Q08919 783 aa6.13□□□□□ -1.43
USB1YLR132C PEX7P39108 375 aa6.12□□□□□ -1.43
USB1YLR132C YAR028WP39548 234 aa6.12□□□□□ -1.43
USB1YLR132C RSM26P47141 266 aa6.12□□□□□ -1.43
USB1YLR132C YJR107WP47145 328 aa6.12□□□□□ -1.43
USB1YLR132C KAR2P16474 682 aaKnown RBP6.11□□□□□ -1.43
USB1YLR132C RNQ1P25367 405 aa6.11□□□□□ -1.43
USB1YLR132C XKS1P42826 600 aa6.11□□□□□ -1.43
USB1YLR132C SSY1Q03770 852 aa6.11□□□□□ -1.43
USB1YLR132C PUS7Q08647 676 aaKnown RBP6.11□□□□□ -1.43
USB1YLR132C ADP1P25371 1049 aa6.1□□□□□ -1.43
USB1YLR132C SQT1P35184 431 aa6.1□□□□□ -1.43
USB1YLR132C ECL1P48235 211 aa6.1□□□□□ -1.43
USB1YLR132C TPP1Q03796 238 aa6.1□□□□□ -1.43
USB1YLR132C VMA4P22203 233 aaKnown RBP6.09□□□□□ -1.43
USB1YLR132C PRO1P32264 428 aa6.09□□□□□ -1.43
USB1YLR132C PEX28P38848 579 aa6.09□□□□□ -1.43
USB1YLR132C FAA3P39002 694 aa6.09□□□□□ -1.43
USB1YLR132C YLR257WQ06146 321 aaKnown RBP6.09□□□□□ -1.43
USB1YLR132C NMD3P38861 518 aaKnown RBP6.08□□□□□ -1.44
USB1YLR132C LPX1Q12405 387 aaKnown RBP6.08□□□□□ -1.44
USB1YLR132C HEM13P11353 328 aaKnown RBP6.07□□□□□ -1.44
USB1YLR132C RET1P22276 1149 aaKnown RBP6.07□□□□□ -1.44
USB1YLR132C PEP7P32609 515 aa6.07□□□□□ -1.44
USB1YLR132C PAM1P37304 830 aaKnown RBP6.07□□□□□ -1.44
USB1YLR132C RDH54P38086 958 aa6.07□□□□□ -1.44
USB1YLR132C ORC3P54790 616 aa6.07□□□□□ -1.44
USB1YLR132C YPL109CQ02981 657 aa6.07□□□□□ -1.44
USB1YLR132C RMD1Q03441 430 aa6.07□□□□□ -1.44
USB1YLR132C ADI1Q03677 179 aa6.07□□□□□ -1.44
USB1YLR132C RSA3Q05942 220 aaKnown RBP6.07□□□□□ -1.44
USB1YLR132C HXK1P04806 485 aaKnown RBP6.06□□□□□ -1.44
USB1YLR132C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
USB1YLR132C PTC7P38797 343 aa6.06□□□□□ -1.44
USB1YLR132C YGL140CP53120 1219 aa6.06□□□□□ -1.44
USB1YLR132C YGR122WP53272 402 aa6.06□□□□□ -1.44
USB1YLR132C GAS1P22146 559 aaKnown RBP6.05□□□□□ -1.44
USB1YLR132C RPS26AP39938 119 aaKnown RBP6.05□□□□□ -1.44
USB1YLR132C RPS26BP39939 119 aaKnown RBP6.05□□□□□ -1.44
USB1YLR132C NIT1P40447 199 aa6.05□□□□□ -1.44
USB1YLR132C YNR063WP53749 607 aa6.05□□□□□ -1.44
USB1YLR132C LAP2Q10740 671 aa6.05□□□□□ -1.44
USB1YLR132C SPA2P23201 1466 aaKnown RBP6.04□□□□□ -1.44
USB1YLR132C SAM35P14693 329 aa6.04□□□□□ -1.44
USB1YLR132C SEC23P15303 768 aaKnown RBP6.04□□□□□ -1.44
USB1YLR132C TSA1P34760 196 aaKnown RBP6.04□□□□□ -1.44
USB1YLR132C HSE1P38753 452 aa6.04□□□□□ -1.44
USB1YLR132C PIC2P40035 300 aa6.04□□□□□ -1.44
USB1YLR132C GTS1P40956 396 aa6.04□□□□□ -1.44
USB1YLR132C MRPS18P42847 217 aa6.04□□□□□ -1.44
USB1YLR132C ESF1Q06344 628 aaKnown RBP6.04□□□□□ -1.44
USB1YLR132C PRE9P23638 258 aaKnown RBP6.03□□□□□ -1.44
USB1YLR132C MCM2P29469 868 aa6.03□□□□□ -1.44
USB1YLR132C UBP5P39944 805 aa6.03□□□□□ -1.44
USB1YLR132C YJL045WP47052 634 aa6.03□□□□□ -1.44
USB1YLR132C PRP43P53131 767 aaKnown RBP6.03□□□□□ -1.44
USB1YLR132C RKM2Q03942 479 aa6.03□□□□□ -1.44
USB1YLR132C JIP5Q06214 492 aaPredicted RBP6.03□□□□□ -1.44
USB1YLR132C CDA2Q06703 312 aa6.03□□□□□ -1.44
USB1YLR132C HRK1Q08732 759 aaKnown RBP6.03□□□□□ -1.44
USB1YLR132C MCD1Q12158 566 aa6.03□□□□□ -1.44
USB1YLR132C ADD66P36040 267 aa6.02□□□□□ -1.45
USB1YLR132C ATG14P38270 344 aa6.02□□□□□ -1.45
USB1YLR132C YHL012WP38709 493 aa6.02□□□□□ -1.45
USB1YLR132C QNS1P38795 714 aaKnown RBP6.02□□□□□ -1.45
USB1YLR132C FYV10P40492 516 aa6.02□□□□□ -1.45
USB1YLR132C SPR28Q04921 423 aa6.02□□□□□ -1.45
USB1YLR132C CYC8P14922 966 aa6.01□□□□□ -1.45
USB1YLR132C CLN2P20438 545 aa6.01□□□□□ -1.45
USB1YLR132C MAD1P40957 749 aa6.01□□□□□ -1.45
USB1YLR132C HSL1P34244 1518 aa6□□□□□ -1.45
USB1YLR132C RAD2P07276 1031 aa6□□□□□ -1.45
USB1YLR132C AFG2P32794 780 aa6□□□□□ -1.45
USB1YLR132C EST2Q06163 884 aa6□□□□□ -1.45
USB1YLR132C VPS53P47061 822 aa5.99□□□□□ -1.45
USB1YLR132C YDL177CQ12257 170 aa5.99□□□□□ -1.45
USB1YLR132C SPT6P23615 1451 aaKnown RBP5.98□□□□□ -1.45
USB1YLR132C MDL2P33311 773 aa5.98□□□□□ -1.45
USB1YLR132C PET112P33893 541 aa5.98□□□□□ -1.45
USB1YLR132C MNR2P35724 969 aa5.97□□□□□ -1.45
USB1YLR132C DED1P06634 604 aaKnown RBP5.96□□□□□ -1.46
USB1YLR132C SRO9P25567 434 aaKnown RBP5.96□□□□□ -1.46
USB1YLR132C YSC84P32793 468 aa5.96□□□□□ -1.46
USB1YLR132C ETP1P38748 585 aaKnown RBP5.96□□□□□ -1.46
USB1YLR132C HDA2Q06629 674 aa5.96□□□□□ -1.46
USB1YLR132C SGS1P35187 1447 aa5.96□□□□□ -1.46
USB1YLR132C CWC24P53769 259 aa5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms