RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C FLP1P03870 423 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-LR4P0C2I8 440 aaKnown RBP6.23□□□□□ -1.41
TVP38YKR088C TY1A-DR6P0CX70 440 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-ER1P0CX71 440 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-LR2P0CX72 440 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-PLP0CX73 440 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-JR1P0CX74 440 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-LR3P0CX75 440 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-ML2P0CX76 440 aa6.23□□□□□ -1.41
TVP38YKR088C TOD6P34219 525 aa6.23□□□□□ -1.41
TVP38YKR088C YKL077WP36081 392 aa6.23□□□□□ -1.41
TVP38YKR088C NUT1P53114 1132 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-GR1Q12085 440 aa6.23□□□□□ -1.41
TVP38YKR088C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.23□□□□□ -1.41
TVP38YKR088C TY1A-OLQ92392 440 aaKnown RBP6.23□□□□□ -1.41
TVP38YKR088C MDS3P53094 1487 aa6.22□□□□□ -1.41
TVP38YKR088C MCM5P29496 775 aaKnown RBP6.22□□□□□ -1.41
TVP38YKR088C TY1B-DR3Q99231 1755 aa6.21□□□□□ -1.41
TVP38YKR088C MLP2P40457 1679 aa6.21□□□□□ -1.42
TVP38YKR088C SNO2P53823 222 aa6.21□□□□□ -1.42
TVP38YKR088C YPL277CQ08989 487 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-LR1P0C2J3 1770 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-FP0CX63 1770 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-GR2P0CX64 1770 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-CP25384 1770 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-DR2Q03494 1770 aa6.21□□□□□ -1.42
TVP38YKR088C TY1B-DR1Q03855 1755 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-DR3Q07791 1770 aaKnown RBP6.21□□□□□ -1.42
TVP38YKR088C TY2B-OR1Q12113 1770 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-DR1Q12472 1770 aa6.21□□□□□ -1.42
TVP38YKR088C TY2B-OR2Q12501 1770 aa6.21□□□□□ -1.42
TVP38YKR088C PDR15Q04182 1529 aaKnown RBP6.2□□□□□ -1.42
TVP38YKR088C GEA1P47102 1408 aaPredicted RBP6.19□□□□□ -1.42
TVP38YKR088C RPS13P05756 151 aaKnown RBP6.19□□□□□ -1.42
TVP38YKR088C YHL012WP38709 493 aa6.19□□□□□ -1.42
TVP38YKR088C RVS167P39743 482 aaKnown RBP6.19□□□□□ -1.42
TVP38YKR088C CDC55Q00362 526 aa6.19□□□□□ -1.42
TVP38YKR088C TRS120Q04183 1289 aa6.19□□□□□ -1.42
TVP38YKR088C SHU2P38957 223 aa6.18□□□□□ -1.42
TVP38YKR088C ACF4P47129 309 aa6.18□□□□□ -1.42
TVP38YKR088C ATG1P53104 897 aa6.18□□□□□ -1.42
TVP38YKR088C ULS1Q08562 1619 aa6.17□□□□□ -1.42
TVP38YKR088C YAR028WP39548 234 aa6.17□□□□□ -1.42
TVP38YKR088C SLS1P42900 643 aa6.17□□□□□ -1.42
TVP38YKR088C TY2B-BQ12491 1770 aa6.16□□□□□ -1.42
TVP38YKR088C YLR358CO13565 187 aa6.16□□□□□ -1.42
TVP38YKR088C RET1P22276 1149 aaKnown RBP6.16□□□□□ -1.42
TVP38YKR088C MDL2P33311 773 aa6.16□□□□□ -1.42
TVP38YKR088C ABZ1P37254 787 aaPredicted RBP6.16□□□□□ -1.42
TVP38YKR088C CLU1Q03690 1277 aaKnown RBP6.16□□□□□ -1.42
TVP38YKR088C YLR257WQ06146 321 aaKnown RBP6.16□□□□□ -1.42
TVP38YKR088C INP54Q08227 384 aaKnown RBP6.16□□□□□ -1.42
TVP38YKR088C MNL2Q12205 849 aa6.16□□□□□ -1.42
TVP38YKR088C PAN1P32521 1480 aa6.15□□□□□ -1.42
TVP38YKR088C SAM35P14693 329 aa6.15□□□□□ -1.42
TVP38YKR088C EXO5P38289 585 aa6.15□□□□□ -1.42
TVP38YKR088C MON1P53129 644 aa6.15□□□□□ -1.42
TVP38YKR088C SUB2Q07478 446 aaKnown RBP6.15□□□□□ -1.42
TVP38YKR088C TSC11P40061 1430 aa6.15□□□□□ -1.43
TVP38YKR088C TY3B-GQ99315 1547 aa6.15□□□□□ -1.43
TVP38YKR088C HSE1P38753 452 aa6.14□□□□□ -1.43
TVP38YKR088C NMD3P38861 518 aaKnown RBP6.14□□□□□ -1.43
TVP38YKR088C MTR4P47047 1073 aaKnown RBP6.14□□□□□ -1.43
TVP38YKR088C RPL34AP87262 121 aaPredicted RBP6.14□□□□□ -1.43
TVP38YKR088C HRK1Q08732 759 aaKnown RBP6.14□□□□□ -1.43
TVP38YKR088C AIM26P32858 118 aa6.13□□□□□ -1.43
TVP38YKR088C TUB2P02557 457 aaKnown RBP6.12□□□□□ -1.43
TVP38YKR088C SHM2P37291 469 aaKnown RBP6.12□□□□□ -1.43
TVP38YKR088C ENP1P38333 483 aaKnown RBP6.12□□□□□ -1.43
TVP38YKR088C NEM1P38757 446 aa6.12□□□□□ -1.43
TVP38YKR088C LAP2Q10740 671 aa6.12□□□□□ -1.43
TVP38YKR088C ATG14P38270 344 aa6.11□□□□□ -1.43
TVP38YKR088C YOR352WQ08816 343 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-HO13535 1793 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-DR5P0C2I2 1755 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-DR6P0C2I3 1755 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-LR2P0C2I5 1755 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-LR3P0C2I6 1755 aaKnown RBP6.11□□□□□ -1.43
TVP38YKR088C TY1B-PR1P0C2I9 1755 aaKnown RBP6.11□□□□□ -1.43
TVP38YKR088C TY1B-PR2P0C2J0 1756 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-PR3P0C2J1 1755 aaKnown RBP6.11□□□□□ -1.43
TVP38YKR088C TY1B-JR1P47098 1755 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-ML2Q03434 1755 aaKnown RBP6.11□□□□□ -1.43
TVP38YKR088C TY1B-ER1Q03612 1755 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-ML1Q04711 1755 aaKnown RBP6.11□□□□□ -1.43
TVP38YKR088C TY1B-GR2Q12269 1755 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-OLQ12273 1755 aa6.11□□□□□ -1.43
TVP38YKR088C TY1B-PLQ12414 1755 aaKnown RBP6.11□□□□□ -1.43
TVP38YKR088C PRE10P21242 288 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
TVP38YKR088C SRO9P25567 434 aaKnown RBP6.1□□□□□ -1.43
TVP38YKR088C CTS1P29029 562 aa6.1□□□□□ -1.43
TVP38YKR088C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43 RIP-Chip
TVP38YKR088C RSA3Q05942 220 aaKnown RBP6.1□□□□□ -1.43
TVP38YKR088C NOC3Q07896 663 aaPredicted RBP6.09□□□□□ -1.43
TVP38YKR088C PNS1Q12412 539 aa6.09□□□□□ -1.43
TVP38YKR088C SNT2P53127 1403 aa6.08□□□□□ -1.44
TVP38YKR088C ENV11P53246 860 aa6.08□□□□□ -1.44
TVP38YKR088C VTH1P40438 1549 aa6.08□□□□□ -1.44
TVP38YKR088C VTH2P40890 1549 aa6.08□□□□□ -1.44
TVP38YKR088C TY1B-BRQ12193 1756 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms