RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	GDE1	Q02979	1223 aa		8.01	□□□□□ -1.13
TIF1	YKR059W	ERO1	Q03103	563 aa		8.01	□□□□□ -1.13
TIF1	YKR059W	HIM1	Q06674	414 aa		8.01	□□□□□ -1.13
TIF1	YKR059W	MCD1	Q12158	566 aa		8.01	□□□□□ -1.13
TIF1	YKR059W	SCD5	P34758	872 aa		8	□□□□□ -1.13
TIF1	YKR059W	RAT1	Q02792	1006 aa	Known RBP	8	□□□□□ -1.13
TIF1	YKR059W	NAN1	Q02931	896 aa	Known RBP	8	□□□□□ -1.13
TIF1	YKR059W	ISU1	Q03020	165 aa		8	□□□□□ -1.13
TIF1	YKR059W	RMT2	Q03305	412 aa		8	□□□□□ -1.13
TIF1	YKR059W	DIB1	Q06819	143 aa	Predicted RBP	8	□□□□□ -1.13
TIF1	YKR059W	PHM7	Q12252	991 aa		8	□□□□□ -1.13
TIF1	YKR059W	UTP10	P42945	1769 aa	Known RBP	7.99	□□□□□ -1.13
TIF1	YKR059W	MRPL33	P20084	86 aa		7.99	□□□□□ -1.13
TIF1	YKR059W	RET1	P22276	1149 aa	Known RBP	7.99	□□□□□ -1.13
TIF1	YKR059W	PRE9	P23638	258 aa	Known RBP	7.99	□□□□□ -1.13
TIF1	YKR059W	SMY1	P32364	656 aa	Known RBP	7.99	□□□□□ -1.13
TIF1	YKR059W	FIR1	P40020	876 aa		7.99	□□□□□ -1.13
TIF1	YKR059W	HXT8	P40886	569 aa		7.99	□□□□□ -1.13
TIF1	YKR059W	LPD1	P09624	499 aa	Known RBP	7.98	□□□□□ -1.13
TIF1	YKR059W	KAR2	P16474	682 aa	Known RBP	7.98	□□□□□ -1.13
TIF1	YKR059W	HSP104	P31539	908 aa	Known RBP	7.98	□□□□□ -1.13
TIF1	YKR059W	YBR287W	P38355	427 aa		7.98	□□□□□ -1.13
TIF1	YKR059W	ETP1	P38748	585 aa	Known RBP	7.98	□□□□□ -1.13
TIF1	YKR059W	TIM54	P47045	478 aa		7.98	□□□□□ -1.13
TIF1	YKR059W	TDA5	Q06417	326 aa	Known RBP	7.98	□□□□□ -1.13
TIF1	YKR059W	YLR278C	Q05854	1341 aa		7.98	□□□□□ -1.13
TIF1	YKR059W	NUP82	P40368	713 aa		7.97	□□□□□ -1.13
TIF1	YKR059W	HUL5	P53119	910 aa		7.97	□□□□□ -1.13
TIF1	YKR059W	DUS1	P53759	423 aa	Known RBP	7.97	□□□□□ -1.13
TIF1	YKR059W	FBP26	P32604	452 aa		7.96	□□□□□ -1.14
TIF1	YKR059W	KRI1	P42846	591 aa	Known RBP	7.96	□□□□□ -1.14
TIF1	YKR059W	DAL4	Q04895	635 aa		7.96	□□□□□ -1.14
TIF1	YKR059W	RGA2	Q06407	1009 aa		7.96	□□□□□ -1.14
TIF1	YKR059W	YLR125W	Q12138	136 aa		7.96	□□□□□ -1.14
TIF1	YKR059W	HXK1	P04806	485 aa	Known RBP	7.95	□□□□□ -1.14
TIF1	YKR059W	MCM1	P11746	286 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	AMS1	P22855	1083 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	MKS1	P34072	584 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	LDH1	P38139	375 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	RAD55	P38953	406 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	EMW1	P42842	904 aa	Known RBP	7.95	□□□□□ -1.14
TIF1	YKR059W	YFR016C	P43597	1233 aa	Known RBP	7.95	□□□□□ -1.14
TIF1	YKR059W	MTO1	P53070	669 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	RSC4	Q02206	625 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	SAS4	Q04003	481 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	AOS1	Q06624	347 aa		7.95	□□□□□ -1.14
TIF1	YKR059W	PHO8	P11491	566 aa		7.94	□□□□□ -1.14
TIF1	YKR059W	CTI6	Q08923	506 aa		7.94	□□□□□ -1.14
TIF1	YKR059W	GRX6	Q12438	231 aa		7.94	□□□□□ -1.14
TIF1	YKR059W	CDC34	P14682	295 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	PRI2	P20457	528 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	KCC4	P25389	1037 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	YKU70	P32807	602 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	AKL1	P38080	1108 aa	Known RBP	7.93	□□□□□ -1.14
TIF1	YKR059W	FAA3	P39002	694 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.93	□□□□□ -1.14	not detected
TIF1	YKR059W	YJR142W	P47173	342 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	SYH1	Q02875	849 aa	Known RBP	7.93	□□□□□ -1.14
TIF1	YKR059W	YCS4	Q06156	1176 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	SSP2	Q08646	371 aa		7.93	□□□□□ -1.14
TIF1	YKR059W	THS1	P04801	734 aa	Known RBP	7.92	□□□□□ -1.14
TIF1	YKR059W	ECM2	P38241	364 aa	Known RBP	7.92	□□□□□ -1.14
TIF1	YKR059W	HXT5	P38695	592 aa		7.92	□□□□□ -1.14
TIF1	YKR059W	DYS1	P38791	387 aa		7.92	□□□□□ -1.14
TIF1	YKR059W	IRC3	Q06683	689 aa		7.92	□□□□□ -1.14
TIF1	YKR059W	SDH2	P21801	266 aa		7.91	□□□□□ -1.14
TIF1	YKR059W	VMA3	P25515	160 aa		7.91	□□□□□ -1.14
TIF1	YKR059W	ICL1	P28240	557 aa	Predicted RBP	7.91	□□□□□ -1.14
TIF1	YKR059W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	7.91	□□□□□ -1.14	not detected
TIF1	YKR059W	DLD3	P39976	496 aa	Known RBP	7.91	□□□□□ -1.14
TIF1	YKR059W	FAA4	P47912	694 aa	Known RBP	7.91	□□□□□ -1.14
TIF1	YKR059W	YRB30	P53107	440 aa	Predicted RBP	7.91	□□□□□ -1.14
TIF1	YKR059W	SPO75	Q07798	868 aa		7.91	□□□□□ -1.14
TIF1	YKR059W	OPI10	Q08202	246 aa		7.91	□□□□□ -1.14
TIF1	YKR059W	FAL1	Q12099	399 aa	Known RBP	7.91	□□□□□ -1.14
TIF1	YKR059W	OSH2	Q12451	1283 aa		7.91	□□□□□ -1.14
TIF1	YKR059W	SSK22	P25390	1331 aa	Predicted RBP	7.91	□□□□□ -1.14
TIF1	YKR059W	THI4	P32318	326 aa		7.9	□□□□□ -1.14
TIF1	YKR059W	SWE1	P32944	819 aa		7.9	□□□□□ -1.14
TIF1	YKR059W	GRX7	P38068	203 aa		7.9	□□□□□ -1.14
TIF1	YKR059W	WTM2	Q12206	467 aa		7.9	□□□□□ -1.14
TIF1	YKR059W	FIG2	P25653	1609 aa		7.89	□□□□□ -1.15
TIF1	YKR059W	MOD5	P07884	428 aa		7.89	□□□□□ -1.15
TIF1	YKR059W	SER1	P33330	395 aa	Known RBP	7.89	□□□□□ -1.15
TIF1	YKR059W	IRS4	P36115	615 aa	Known RBP	7.89	□□□□□ -1.15
TIF1	YKR059W	SPF1	P39986	1215 aa	Known RBP	7.89	□□□□□ -1.15
TIF1	YKR059W	YJR115W	P47152	169 aa		7.89	□□□□□ -1.15
TIF1	YKR059W	TMA46	Q12000	345 aa	Known RBP	7.89	□□□□□ -1.15
TIF1	YKR059W	GAL11	P19659	1081 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	UGA3	P26370	528 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	RAD27	P26793	382 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	TIM23	P32897	222 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	NTA1	P40354	457 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	TPM2	P40414	161 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	PDS5	Q04264	1277 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	UTP4	Q06679	776 aa	Known RBP	7.88	□□□□□ -1.15
TIF1	YKR059W	SRF1	Q12516	437 aa		7.88	□□□□□ -1.15
TIF1	YKR059W	LYS2	P07702	1392 aa		7.87	□□□□□ -1.15
TIF1	YKR059W	SRM1	P21827	482 aa		7.87	□□□□□ -1.15
TIF1	YKR059W	GGA2	P38817	585 aa	Known RBP	7.87	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms