RNA–Protein interactions for RNA: YKR010C

TOF2, Transcript of Protein required for rDNA silencing and mitotic rDNA condensation, yeast

Gene TOF2, Length 2,316 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOF2	YKR010C	ADI1	Q03677	179 aa		3.18	□□□□□ -1.9
TOF2	YKR010C	YIG1	Q08956	461 aa		3.18	□□□□□ -1.9
TOF2	YKR010C	YLL054C	Q12244	843 aa		3.18	□□□□□ -1.9
TOF2	YKR010C	HEM13	P11353	328 aa	Known RBP	3.17	□□□□□ -1.9
TOF2	YKR010C	MSH3	P25336	1018 aa		3.17	□□□□□ -1.9
TOF2	YKR010C	DOT1	Q04089	582 aa	Known RBP	3.17	□□□□□ -1.9
TOF2	YKR010C	PRE9	P23638	258 aa	Known RBP	3.16	□□□□□ -1.9
TOF2	YKR010C	PEP7	P32609	515 aa		3.16	□□□□□ -1.9
TOF2	YKR010C	TSA1	P34760	196 aa	Known RBP	3.16	□□□□□ -1.9
TOF2	YKR010C	SQT1	P35184	431 aa		3.16	□□□□□ -1.9
TOF2	YKR010C	PEX28	P38848	579 aa		3.16	□□□□□ -1.9
TOF2	YKR010C	SLS1	P42900	643 aa		3.16	□□□□□ -1.9
TOF2	YKR010C	ALG6	Q12001	544 aa	Known RBP	3.16	□□□□□ -1.9
TOF2	YKR010C	ADP1	P25371	1049 aa		3.16	□□□□□ -1.9
TOF2	YKR010C	NEM1	P38757	446 aa		3.16	□□□□□ -1.9
TOF2	YKR010C	MRPS18	P42847	217 aa		3.16	□□□□□ -1.9
TOF2	YKR010C	YKL077W	P36081	392 aa		3.15	□□□□□ -1.9
TOF2	YKR010C	OYE3	P41816	400 aa	Predicted RBP	3.15	□□□□□ -1.9
TOF2	YKR010C	YGL140C	P53120	1219 aa		3.15	□□□□□ -1.9
TOF2	YKR010C	THI80	P35202	319 aa		3.15	□□□□□ -1.91
TOF2	YKR010C	GCV1	P48015	400 aa		3.15	□□□□□ -1.91
TOF2	YKR010C	SNU71	P53207	620 aa	Known RBP	3.15	□□□□□ -1.91
TOF2	YKR010C	MEC3	Q02574	474 aa		3.15	□□□□□ -1.91
TOF2	YKR010C	MCD1	Q12158	566 aa		3.15	□□□□□ -1.91
TOF2	YKR010C	RPS4A	P0CX35	261 aa	Known RBP	3.14	□□□□□ -1.91
TOF2	YKR010C	RPS4B	P0CX36	261 aa	Known RBP	3.14	□□□□□ -1.91
TOF2	YKR010C	REI1	P38344	393 aa	Predicted RBP	3.14	□□□□□ -1.91
TOF2	YKR010C	XKS1	P42826	600 aa		3.14	□□□□□ -1.91
TOF2	YKR010C	PAM1	P37304	830 aa	Known RBP	3.14	□□□□□ -1.91
TOF2	YKR010C	RDH54	P38086	958 aa		3.14	□□□□□ -1.91
TOF2	YKR010C	FLR1	P38124	548 aa		3.14	□□□□□ -1.91
TOF2	YKR010C	SHU2	P38957	223 aa		3.14	□□□□□ -1.91
TOF2	YKR010C	GIS1	Q03833	894 aa		3.14	□□□□□ -1.91
TOF2	YKR010C	UTP5	Q04177	643 aa	Known RBP	3.14	□□□□□ -1.91
TOF2	YKR010C	ESF1	Q06344	628 aa	Known RBP	3.14	□□□□□ -1.91
TOF2	YKR010C	GCR1	P07261	785 aa		3.13	□□□□□ -1.91
TOF2	YKR010C	SEC23	P15303	768 aa	Known RBP	3.13	□□□□□ -1.91
TOF2	YKR010C	SSY1	Q03770	852 aa		3.13	□□□□□ -1.91
TOF2	YKR010C	HDA2	Q06629	674 aa		3.13	□□□□□ -1.91
TOF2	YKR010C	PRP6	P19735	899 aa	Predicted RBP	3.12	□□□□□ -1.91
TOF2	YKR010C	YGR045C	P53229	120 aa		3.12	□□□□□ -1.91
TOF2	YKR010C	YNR063W	P53749	607 aa		3.12	□□□□□ -1.91
TOF2	YKR010C	ELA1	P53861	379 aa	Predicted RBP	3.12	□□□□□ -1.91
TOF2	YKR010C	ORC3	P54790	616 aa		3.12	□□□□□ -1.91
TOF2	YKR010C	JIP5	Q06214	492 aa	Predicted RBP	3.12	□□□□□ -1.91
TOF2	YKR010C	MRL1	Q06815	381 aa		3.12	□□□□□ -1.91
TOF2	YKR010C	TRE1	Q08919	783 aa		3.12	□□□□□ -1.91
TOF2	YKR010C	DED1	P06634	604 aa	Known RBP	3.11	□□□□□ -1.91
TOF2	YKR010C	VMA4	P22203	233 aa	Known RBP	3.11	□□□□□ -1.91
TOF2	YKR010C	PET112	P33893	541 aa		3.11	□□□□□ -1.91
TOF2	YKR010C	MTR4	P47047	1073 aa	Known RBP	3.11	□□□□□ -1.91
TOF2	YKR010C	GNP1	P48813	663 aa		3.11	□□□□□ -1.91
TOF2	YKR010C	RMD1	Q03441	430 aa		3.11	□□□□□ -1.91
TOF2	YKR010C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
TOF2	YKR010C	ROD1	Q02805	837 aa		3.11	□□□□□ -1.91
TOF2	YKR010C	PRO1	P32264	428 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	DUT1	P33317	147 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	ARL1	P38116	183 aa	Known RBP	3.1	□□□□□ -1.91
TOF2	YKR010C	AIM3	P38266	947 aa	Known RBP	3.1	□□□□□ -1.91
TOF2	YKR010C	HXT13	P39924	564 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	MSH4	P40965	878 aa	Predicted RBP	3.1	□□□□□ -1.91
TOF2	YKR010C	HXT17	P53631	564 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	HXT15	P54854	567 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	EST2	Q06163	884 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	AVO1	Q08236	1176 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	NMD3	P38861	518 aa	Known RBP	3.1	□□□□□ -1.91
TOF2	YKR010C	EAR1	Q03212	550 aa		3.1	□□□□□ -1.91
TOF2	YKR010C	AFG2	P32794	780 aa		3.09	□□□□□ -1.91
TOF2	YKR010C	ADD66	P36040	267 aa		3.09	□□□□□ -1.91
TOF2	YKR010C	YAR028W	P39548	234 aa		3.09	□□□□□ -1.91
TOF2	YKR010C	ALT1	P52893	592 aa		3.09	□□□□□ -1.91
TOF2	YKR010C	RIM8	P53179	542 aa		3.09	□□□□□ -1.91
TOF2	YKR010C	RAT1	Q02792	1006 aa	Known RBP	3.09	□□□□□ -1.91
TOF2	YKR010C	LPX1	Q12405	387 aa	Known RBP	3.09	□□□□□ -1.91
TOF2	YKR010C	PEX7	P39108	375 aa		3.09	□□□□□ -1.92
TOF2	YKR010C	SIW14	P53965	281 aa		3.09	□□□□□ -1.92
TOF2	YKR010C	VPS16	Q03308	798 aa		3.09	□□□□□ -1.92
TOF2	YKR010C	YVC1	Q12324	675 aa		3.09	□□□□□ -1.92
TOF2	YKR010C	CDC34	P14682	295 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	NFS1	P25374	497 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	PTC7	P38797	343 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	MRPL22	P53881	309 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	SVF1	Q05515	481 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	RTT10	Q08924	1013 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	MKK2	P32491	506 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	RER2	P35196	286 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	MAD1	P40957	749 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	FAA4	P47912	694 aa	Known RBP	3.08	□□□□□ -1.92
TOF2	YKR010C	EEB1	Q02891	456 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	GSF2	Q04697	403 aa	Known RBP	3.08	□□□□□ -1.92
TOF2	YKR010C	PIN2	Q12057	282 aa		3.08	□□□□□ -1.92
TOF2	YKR010C	TAF13	P11747	167 aa		3.07	□□□□□ -1.92
TOF2	YKR010C	RET1	P22276	1149 aa	Known RBP	3.07	□□□□□ -1.92
TOF2	YKR010C	SMY2	P32909	740 aa	Known RBP	3.07	□□□□□ -1.92
TOF2	YKR010C	MNR2	P35724	969 aa		3.07	□□□□□ -1.92
TOF2	YKR010C	ATG14	P38270	344 aa		3.07	□□□□□ -1.92
TOF2	YKR010C	GTS1	P40956	396 aa		3.07	□□□□□ -1.92
TOF2	YKR010C	NOP7	P53261	605 aa	Known RBP	3.07	□□□□□ -1.92
TOF2	YKR010C	RSA3	Q05942	220 aa	Known RBP	3.07	□□□□□ -1.92
TOF2	YKR010C	YLR257W	Q06146	321 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 196.3 ms