RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	UGA4	P32837	571 aa		5	□□□□□ -1.61
FOX2	YKR009C	GRS1	P38088	690 aa	Known RBP	5	□□□□□ -1.61
FOX2	YKR009C	NOC2	P39744	710 aa	Known RBP	5	□□□□□ -1.61
FOX2	YKR009C	BUL2	Q03758	920 aa	Known RBP	5	□□□□□ -1.61
FOX2	YKR009C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
FOX2	YKR009C	SRP40	P32583	406 aa	Predicted RBP	5	□□□□□ -1.61
FOX2	YKR009C	TFC4	P33339	1025 aa		5	□□□□□ -1.61
FOX2	YKR009C	YMR321C	Q04898	105 aa		5	□□□□□ -1.61
FOX2	YKR009C	DUS3	Q06053	668 aa	Known RBP	5	□□□□□ -1.61
FOX2	YKR009C	TRM11	Q12463	433 aa		5	□□□□□ -1.61
FOX2	YKR009C	TKL1	P23254	680 aa	Known RBP	4.99	□□□□□ -1.61
FOX2	YKR009C	RER2	P35196	286 aa		4.99	□□□□□ -1.61
FOX2	YKR009C	SKP2	P42843	763 aa		4.99	□□□□□ -1.61
FOX2	YKR009C	SCS3	P53012	380 aa		4.99	□□□□□ -1.61
FOX2	YKR009C	PTA1	Q01329	785 aa	Predicted RBP	4.99	□□□□□ -1.61
FOX2	YKR009C	PDC1	P06169	563 aa	Known RBP	4.99	□□□□□ -1.61
FOX2	YKR009C	RPL8B	P29453	256 aa	Known RBP	4.99	□□□□□ -1.61
FOX2	YKR009C	HDA1	P53973	706 aa		4.99	□□□□□ -1.61
FOX2	YKR009C	MDM1	Q01846	1127 aa		4.99	□□□□□ -1.61
FOX2	YKR009C	MSC6	Q08818	692 aa	Known RBP	4.99	□□□□□ -1.61
FOX2	YKR009C	POA1	P38218	177 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	MSC7	P38694	644 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	VPS53	P47061	822 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	SLD5	Q03406	294 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	YML020W	Q03722	664 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	UTP4	Q06679	776 aa	Known RBP	4.98	□□□□□ -1.61
FOX2	YKR009C	DSE3	Q08729	430 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	ACE2	P21192	770 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	SHP1	P34223	423 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	ALG2	P43636	503 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	DAK1	P54838	584 aa	Known RBP	4.98	□□□□□ -1.61
FOX2	YKR009C	TFC6	Q06339	672 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	TAO3	P40468	2376 aa		4.98	□□□□□ -1.61
FOX2	YKR009C	GPT2	P36148	743 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	CSM2	P40465	213 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	LIF1	P53150	421 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	YGL039W	P53183	348 aa	Known RBP	4.97	□□□□□ -1.61
FOX2	YKR009C	LSB1	P53281	241 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	SUE1	Q06524	206 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	MAM3	Q12296	706 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	YDR524C-B	Q3E6R4	66 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	SNA3	P14359	133 aa		4.97	□□□□□ -1.61
FOX2	YKR009C	TPM1	P17536	199 aa	Known RBP	4.96	□□□□□ -1.61
FOX2	YKR009C	PEP3	P27801	918 aa		4.96	□□□□□ -1.61
FOX2	YKR009C	PAN5	P38787	379 aa		4.96	□□□□□ -1.61
FOX2	YKR009C	RLF2	Q12495	606 aa		4.96	□□□□□ -1.61
FOX2	YKR009C	VAS1	P07806	1104 aa	Known RBP	4.96	□□□□□ -1.62
FOX2	YKR009C	RNR3	P21672	869 aa	Known RBP	4.96	□□□□□ -1.62
FOX2	YKR009C	RME1	P32338	300 aa	Known RBP	4.96	□□□□□ -1.62
FOX2	YKR009C	REG2	P38232	338 aa		4.96	□□□□□ -1.62
FOX2	YKR009C	RTP1	Q12751	981 aa		4.96	□□□□□ -1.62
FOX2	YKR009C	FMS1	P50264	508 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	VIP1	Q06685	1146 aa	Known RBP	4.95	□□□□□ -1.62
FOX2	YKR009C	YDR034W-B	Q6Q5X2	51 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	MIP1	P15801	1254 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	BCH2	P36122	765 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	NDT80	P38830	627 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	FOL2	P51601	243 aa	Known RBP	4.95	□□□□□ -1.62
FOX2	YKR009C	GCR2	Q01722	534 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	EST2	Q06163	884 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	FPR4	Q06205	392 aa	Predicted RBP	4.95	□□□□□ -1.62
FOX2	YKR009C	BRL1	P38770	471 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	SPO22	P40511	975 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	YGR035C	P53222	116 aa		4.95	□□□□□ -1.62
FOX2	YKR009C	WHI4	Q07655	649 aa	Known RBP	4.95	□□□□□ -1.62
FOX2	YKR009C	AFT1	P22149	690 aa		4.94	□□□□□ -1.62
FOX2	YKR009C	KIN82	P25341	720 aa		4.94	□□□□□ -1.62
FOX2	YKR009C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
FOX2	YKR009C	CCT3	P39077	534 aa	Known RBP	4.94	□□□□□ -1.62
FOX2	YKR009C	TPM2	P40414	161 aa		4.94	□□□□□ -1.62
FOX2	YKR009C	AHC1	Q12433	566 aa		4.94	□□□□□ -1.62
FOX2	YKR009C	KTR2	P33550	425 aa		4.94	□□□□□ -1.62
FOX2	YKR009C	FLR1	P38124	548 aa		4.94	□□□□□ -1.62
FOX2	YKR009C	HMF1	P40037	129 aa	Known RBP	4.94	□□□□□ -1.62
FOX2	YKR009C	AIM9	P40053	627 aa	Known RBP	4.94	□□□□□ -1.62
FOX2	YKR009C	YOR111W	Q99210	232 aa		4.94	□□□□□ -1.62
FOX2	YKR009C	DUR3	P33413	735 aa		4.93	□□□□□ -1.62
FOX2	YKR009C	BRN1	P38170	754 aa		4.93	□□□□□ -1.62
FOX2	YKR009C	CIC1	P38779	376 aa	Known RBP	4.93	□□□□□ -1.62
FOX2	YKR009C	YPR117W	Q06116	2489 aa		4.93	□□□□□ -1.62
FOX2	YKR009C	RPL8A	P17076	256 aa	Known RBP	4.93	□□□□□ -1.62
FOX2	YKR009C	RSC8	P43609	557 aa	Known RBP	4.93	□□□□□ -1.62
FOX2	YKR009C	CTR1	P49573	406 aa		4.93	□□□□□ -1.62
FOX2	YKR009C	CUS1	Q02554	436 aa	Predicted RBP	4.93	□□□□□ -1.62
FOX2	YKR009C	GDE1	Q02979	1223 aa		4.93	□□□□□ -1.62
FOX2	YKR009C	MSC2	Q03455	724 aa		4.93	□□□□□ -1.62
FOX2	YKR009C	MAS2	P11914	482 aa		4.92	□□□□□ -1.62
FOX2	YKR009C	OPY1	P38271	328 aa		4.92	□□□□□ -1.62
FOX2	YKR009C	ASE1	P50275	885 aa		4.92	□□□□□ -1.62
FOX2	YKR009C	ESF1	Q06344	628 aa	Known RBP	4.92	□□□□□ -1.62
FOX2	YKR009C	AZR1	P50080	613 aa		4.92	□□□□□ -1.62
FOX2	YKR009C	HIP1	P06775	603 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	SRO9	P25567	434 aa	Known RBP	4.91	□□□□□ -1.62
FOX2	YKR009C	CLB5	P30283	435 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	IMP2'	P32351	346 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	TVP38	P36164	337 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	OYE2	Q03558	400 aa	Known RBP	4.91	□□□□□ -1.62
FOX2	YKR009C	ATG11	Q12527	1178 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	PGA3	Q12746	312 aa	Known RBP	4.91	□□□□□ -1.62
FOX2	YKR009C	BMH2	P34730	273 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms