RNA–Protein interactions for RNA: YKL165C

MCD4, Transcript of Protein involved in GPI anchor synthesis, yeast

Gene MCD4, Length 2,760 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCD4	YKL165C	LRP1	P38801	184 aa	Known RBP	4.25	□□□□□ -1.73
MCD4	YKL165C	YTA6	P40328	754 aa		4.25	□□□□□ -1.73
MCD4	YKL165C	MDE1	P47095	244 aa		4.25	□□□□□ -1.73
MCD4	YKL165C	UBA2	P52488	636 aa		4.25	□□□□□ -1.73
MCD4	YKL165C	SPO1	P53541	631 aa		4.25	□□□□□ -1.73
MCD4	YKL165C	PML39	Q03760	334 aa		4.25	□□□□□ -1.73
MCD4	YKL165C	ARP9	Q05123	467 aa		4.25	□□□□□ -1.73
MCD4	YKL165C	ATG38	Q05789	226 aa	Known RBP	4.25	□□□□□ -1.73
MCD4	YKL165C	PHO8	P11491	566 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	BCK2	P33306	851 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	YKL100C	P34248	587 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	CTM1	P38818	585 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	NIT1	P40447	199 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	MNT3	P40549	630 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	FOL2	P51601	243 aa	Known RBP	4.24	□□□□□ -1.73
MCD4	YKL165C	GPG1	P53130	126 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	COG6	P53959	839 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	YLR326W	Q06170	240 aa	Known RBP	4.24	□□□□□ -1.73
MCD4	YKL165C	ATG26	Q06321	1198 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	SST2	P11972	698 aa	Known RBP	4.24	□□□□□ -1.73
MCD4	YKL165C	GRX1	P25373	110 aa	Known RBP	4.24	□□□□□ -1.73
MCD4	YKL165C	PPQ1	P32945	549 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	RIB7	P33312	244 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	YKL050C	P35736	922 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	UBP13	P38187	747 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	AGX1	P43567	385 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	KXD1	P53158	218 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	NUT2	Q06213	157 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	RSC58	Q07979	502 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	ADR1	P07248	1323 aa		4.24	□□□□□ -1.73
MCD4	YKL165C	YMR084W	A2P2R3	262 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	MCM10	P32354	571 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	TEF4	P36008	412 aa	Known RBP	4.23	□□□□□ -1.73
MCD4	YKL165C	CIC1	P38779	376 aa	Known RBP	4.23	□□□□□ -1.73
MCD4	YKL165C	PEX18	P38855	283 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	YML119W	Q03208	357 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	SGD1	Q06132	899 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	YOR389W	Q08912	624 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	NYV1	Q12255	253 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	ENO2	P00925	437 aa	Known RBP	4.23	□□□□□ -1.73
MCD4	YKL165C	ERR1	P0CX10	437 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	ERR2	P0CX11	437 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	HMG1	P12683	1054 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	RPB4	P20433	221 aa	Predicted RBP	4.23	□□□□□ -1.73
MCD4	YKL165C	PXA2	P34230	853 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	PIP2	P52960	996 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	HST2	P53686	357 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	UFO1	Q04511	668 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	GIC2	Q06648	383 aa		4.23	□□□□□ -1.73
MCD4	YKL165C	TYW1	Q08960	810 aa	Known RBP	4.23	□□□□□ -1.73
MCD4	YKL165C	WRS1	Q12109	432 aa	Known RBP	4.23	□□□□□ -1.73
MCD4	YKL165C	BRR1	Q99177	341 aa	Predicted RBP	4.23	□□□□□ -1.73
MCD4	YKL165C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	RIP-Chip
MCD4	YKL165C	MIH1	P23748	554 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	LYP1	P32487	611 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	YBL036C	P38197	257 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	BOL3	P39724	118 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	UTP18	P40362	594 aa	Predicted RBP	4.22	□□□□□ -1.73
MCD4	YKL165C	THI12	P42883	340 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	THI5	P43534	340 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	SGM1	P47166	707 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	THI11	P47183	340 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	YKU80	Q04437	629 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	YDL073W	Q07454	984 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	THI13	Q07748	340 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	SSP2	Q08646	371 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	PMS1	P14242	873 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	NPR1	P22211	790 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
MCD4	YKL165C	GFD2	P25370	566 aa	Known RBP	4.22	□□□□□ -1.73
MCD4	YKL165C	SCT1	P32784	759 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	OPY1	P38271	328 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	YLF2	P38746	405 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	VPS8	P39702	1274 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	PAP2	P53632	584 aa	Known RBP	4.22	□□□□□ -1.73
MCD4	YKL165C	NCS2	P53923	493 aa	Predicted RBP	4.22	□□□□□ -1.73
MCD4	YKL165C	NEW1	Q08972	1196 aa	Known RBP	4.22	□□□□□ -1.73
MCD4	YKL165C	PHM7	Q12252	991 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	YOR131C	Q12486	218 aa		4.22	□□□□□ -1.73
MCD4	YKL165C	ILS1	P09436	1072 aa	Known RBP	4.21	□□□□□ -1.73
MCD4	YKL165C	PDI1	P17967	522 aa	Known RBP	4.21	□□□□□ -1.73
MCD4	YKL165C	MOT2	P34909	587 aa	Known RBP	4.21	□□□□□ -1.73
MCD4	YKL165C	BEM4	P39011	633 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	TOK1	P40310	691 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	YIL166C	P40445	542 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	GPD2	P41911	440 aa	Known RBP	4.21	□□□□□ -1.73
MCD4	YKL165C	YGR250C	P53316	781 aa	Known RBP	4.21	□□□□□ -1.73
MCD4	YKL165C	ATG13	Q06628	738 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	TSR2	Q06672	205 aa	Known RBP	4.21	□□□□□ -1.73
MCD4	YKL165C	YPR097W	Q06839	1073 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	LAP2	Q10740	671 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	HMI1	Q12039	706 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	REX3	Q12090	404 aa		4.21	□□□□□ -1.73
MCD4	YKL165C	HAP4	P14064	554 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	RDS2	P19541	446 aa	Known RBP	4.21	□□□□□ -1.74
MCD4	YKL165C	NPP1	P25353	742 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	DAL1	P32375	460 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	COY1	P34237	679 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	DHR2	P36009	735 aa	Predicted RBP	4.21	□□□□□ -1.74
MCD4	YKL165C	MIC60	P36112	540 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms