RNA–Protein interactions for RNA: YKL109W

HAP4, Transcript of Transcription factor, yeast

Gene HAP4, Length 1,665 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAP4	YKL109W	TIF35	Q04067	274 aa	Known RBP	5.28	□□□□□ -1.56
HAP4	YKL109W	UTP5	Q04177	643 aa	Known RBP	5.28	□□□□□ -1.56
HAP4	YKL109W	EST2	Q06163	884 aa		5.28	□□□□□ -1.56
HAP4	YKL109W	YIG1	Q08956	461 aa		5.28	□□□□□ -1.56
HAP4	YKL109W	CAN1	P04817	590 aa		5.28	□□□□□ -1.56
HAP4	YKL109W	SBP1	P10080	294 aa	Known RBP	5.28	□□□□□ -1.56
HAP4	YKL109W	HSP60	P19882	572 aa	Known RBP	5.28	□□□□□ -1.56
HAP4	YKL109W	GAR1	P28007	205 aa	Known RBP	5.28	□□□□□ -1.56
HAP4	YKL109W	KRI1	P42846	591 aa	Known RBP	5.28	□□□□□ -1.56
HAP4	YKL109W	ROG3	P43602	733 aa		5.28	□□□□□ -1.56
HAP4	YKL109W	YJR142W	P47173	342 aa		5.28	□□□□□ -1.56
HAP4	YKL109W	RAT1	Q02792	1006 aa	Known RBP	5.28	□□□□□ -1.56
HAP4	YKL109W	TY1A-MR1	Q04215	440 aa		5.28	□□□□□ -1.56
HAP4	YKL109W	YDR461C-A	Q2V2P7	80 aa		5.28	□□□□□ -1.56
HAP4	YKL109W	CIT1	P00890	479 aa		5.27	□□□□□ -1.57
HAP4	YKL109W	INO1	P11986	533 aa		5.27	□□□□□ -1.57
HAP4	YKL109W	GAL11	P19659	1081 aa		5.27	□□□□□ -1.57
HAP4	YKL109W	PBY1	P38254	753 aa		5.27	□□□□□ -1.57
HAP4	YKL109W	SLS1	P42900	643 aa		5.27	□□□□□ -1.57
HAP4	YKL109W	UTP22	P53254	1237 aa	Predicted RBP	5.27	□□□□□ -1.57
HAP4	YKL109W	YPL066W	Q12194	479 aa		5.27	□□□□□ -1.57
HAP4	YKL109W	TSR4	P25040	408 aa		5.26	□□□□□ -1.57
HAP4	YKL109W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
HAP4	YKL109W	SYP1	P25623	870 aa	Known RBP	5.26	□□□□□ -1.57
HAP4	YKL109W	ADD66	P36040	267 aa		5.26	□□□□□ -1.57
HAP4	YKL109W	NEO1	P40527	1151 aa		5.26	□□□□□ -1.57
HAP4	YKL109W	LYS5	P50113	272 aa		5.26	□□□□□ -1.57
HAP4	YKL109W	GUP1	P53154	560 aa		5.26	□□□□□ -1.57
HAP4	YKL109W	ERP6	P53198	216 aa		5.26	□□□□□ -1.57
HAP4	YKL109W	ADE12	P80210	433 aa	Known RBP	5.26	□□□□□ -1.57
HAP4	YKL109W	EAF1	Q06337	982 aa		5.26	□□□□□ -1.57
HAP4	YKL109W	THI4	P32318	326 aa		5.25	□□□□□ -1.57
HAP4	YKL109W	GGA2	P38817	585 aa	Known RBP	5.25	□□□□□ -1.57
HAP4	YKL109W	UTP8	P53276	713 aa	Known RBP	5.25	□□□□□ -1.57
HAP4	YKL109W	AOS1	Q06624	347 aa		5.25	□□□□□ -1.57
HAP4	YKL109W	YGR161W-C	Q3E744	92 aa		5.25	□□□□□ -1.57
HAP4	YKL109W	DBP5	P20449	482 aa	Known RBP	5.24	□□□□□ -1.57
HAP4	YKL109W	ARE1	P25628	610 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	AFG2	P32794	780 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	CNN1	P43618	361 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	MTR4	P47047	1073 aa	Known RBP	5.24	□□□□□ -1.57
HAP4	YKL109W	RTA1	P53047	317 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	TAF8	Q03750	510 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	UBX5	Q06682	500 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	SYT1	Q06836	1226 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	RKM4	Q12504	494 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	MBP1	P39678	833 aa		5.24	□□□□□ -1.57
HAP4	YKL109W	UTP14	Q04500	899 aa	Known RBP	5.24	□□□□□ -1.57
HAP4	YKL109W	GRX4	P32642	244 aa		5.23	□□□□□ -1.57
HAP4	YKL109W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
HAP4	YKL109W	YKL107W	P34251	309 aa		5.23	□□□□□ -1.57
HAP4	YKL109W	ARL1	P38116	183 aa	Known RBP	5.23	□□□□□ -1.57
HAP4	YKL109W	MPH1	P40562	993 aa		5.23	□□□□□ -1.57
HAP4	YKL109W	LEM3	P42838	414 aa		5.23	□□□□□ -1.57
HAP4	YKL109W	YGL176C	P46945	554 aa		5.23	□□□□□ -1.57
HAP4	YKL109W	SOK2	P53438	785 aa	Predicted RBP	5.23	□□□□□ -1.57
HAP4	YKL109W	RKM2	Q03942	479 aa		5.23	□□□□□ -1.57
HAP4	YKL109W	BET3	P36149	193 aa		5.22	□□□□□ -1.57
HAP4	YKL109W	MCM7	P38132	845 aa		5.22	□□□□□ -1.57
HAP4	YKL109W	MSH4	P40965	878 aa	Predicted RBP	5.22	□□□□□ -1.57
HAP4	YKL109W	ALR2	P43553	858 aa		5.22	□□□□□ -1.57
HAP4	YKL109W	GCV1	P48015	400 aa		5.22	□□□□□ -1.57
HAP4	YKL109W	MEC3	Q02574	474 aa		5.22	□□□□□ -1.57
HAP4	YKL109W	LCB5	Q06147	687 aa	Known RBP	5.22	□□□□□ -1.57
HAP4	YKL109W	PRP9	P19736	530 aa	Known RBP	5.21	□□□□□ -1.57
HAP4	YKL109W	PAN5	P38787	379 aa		5.21	□□□□□ -1.57
HAP4	YKL109W	CEM1	P39525	442 aa		5.21	□□□□□ -1.57
HAP4	YKL109W	HUL4	P40985	892 aa		5.21	□□□□□ -1.57
HAP4	YKL109W	SPO74	P45819	413 aa		5.21	□□□□□ -1.57
HAP4	YKL109W	MET22	P32179	357 aa		5.21	□□□□□ -1.58
HAP4	YKL109W	ALG3	P38179	458 aa		5.21	□□□□□ -1.58
HAP4	YKL109W	SPO71	Q03868	1245 aa		5.21	□□□□□ -1.58
HAP4	YKL109W	YDR444W	Q04093	687 aa		5.21	□□□□□ -1.58
HAP4	YKL109W	NOP14	Q99207	810 aa	Known RBP	5.21	□□□□□ -1.58
HAP4	YKL109W	MSH2	P25847	964 aa		5.2	□□□□□ -1.58
HAP4	YKL109W	POL5	P39985	1022 aa	Known RBP	5.2	□□□□□ -1.58
HAP4	YKL109W	GIP2	P40036	548 aa		5.2	□□□□□ -1.58
HAP4	YKL109W	SIP5	P40210	489 aa	Known RBP	5.2	□□□□□ -1.58
HAP4	YKL109W	YIR007W	P40566	764 aa		5.2	□□□□□ -1.58
HAP4	YKL109W	YGL081W	P53156	320 aa		5.2	□□□□□ -1.58
HAP4	YKL109W	YNR063W	P53749	607 aa		5.2	□□□□□ -1.58
HAP4	YKL109W	DNM1	P54861	757 aa		5.2	□□□□□ -1.58
HAP4	YKL109W	NTG2	Q08214	380 aa		5.2	□□□□□ -1.58
HAP4	YKL109W	SSB1	P11484	613 aa	Known RBP	5.19	□□□□□ -1.58
HAP4	YKL109W	PDC5	P16467	563 aa	Known RBP	5.19	□□□□□ -1.58
HAP4	YKL109W	NAR1	P23503	491 aa	Known RBP	5.19	□□□□□ -1.58
HAP4	YKL109W	MLS1	P30952	554 aa		5.19	□□□□□ -1.58
HAP4	YKL109W	HBS1	P32769	611 aa	Known RBP	5.19	□□□□□ -1.58
HAP4	YKL109W	TOM20	P35180	183 aa		5.19	□□□□□ -1.58
HAP4	YKL109W	REI1	P38344	393 aa	Predicted RBP	5.19	□□□□□ -1.58
HAP4	YKL109W	UBP12	P39538	1254 aa		5.19	□□□□□ -1.58
HAP4	YKL109W	SSB2	P40150	613 aa	Known RBP	5.19	□□□□□ -1.58
HAP4	YKL109W	ATG36	P46983	293 aa		5.19	□□□□□ -1.58
HAP4	YKL109W	HNT2	P49775	206 aa		5.19	□□□□□ -1.58
HAP4	YKL109W	MAL11	P53048	616 aa		5.19	□□□□□ -1.58
HAP4	YKL109W	GIS4	Q04233	774 aa		5.19	□□□□□ -1.58
HAP4	YKL109W	SRM1	P21827	482 aa		5.18	□□□□□ -1.58
HAP4	YKL109W	RGD1	P38339	666 aa		5.18	□□□□□ -1.58
HAP4	YKL109W	SNF7	P39929	240 aa	Known RBP	5.18	□□□□□ -1.58
HAP4	YKL109W	TED1	P40533	473 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms