RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C SAP155P43612 1002 aa4.3□□□□□ -1.72
SPT23YKL020C RKM1Q08961 583 aaPredicted RBP4.3□□□□□ -1.72
SPT23YKL020C TRK1P12685 1235 aa4.3□□□□□ -1.72
SPT23YKL020C HEL1P36113 551 aa4.3□□□□□ -1.72
SPT23YKL020C STN1P38960 494 aa4.3□□□□□ -1.72
SPT23YKL020C MAD1P40957 749 aa4.3□□□□□ -1.72
SPT23YKL020C CUS1Q02554 436 aaPredicted RBP4.3□□□□□ -1.72
SPT23YKL020C YIG1Q08956 461 aa4.3□□□□□ -1.72
SPT23YKL020C ATG9Q12142 997 aa4.3□□□□□ -1.72
SPT23YKL020C YSP2Q06681 1438 aa4.29□□□□□ -1.72
SPT23YKL020C TRL1P09880 827 aaKnown RBP4.29□□□□□ -1.72
SPT23YKL020C PMS1P14242 873 aa4.29□□□□□ -1.72
SPT23YKL020C RRN6P32786 894 aa4.29□□□□□ -1.72
SPT23YKL020C DID4P36108 232 aa4.29□□□□□ -1.72
SPT23YKL020C RXT2P38255 430 aa4.29□□□□□ -1.72
SPT23YKL020C OSH3P38713 996 aaKnown RBP4.29□□□□□ -1.72
SPT23YKL020C UTP22P53254 1237 aaPredicted RBP4.29□□□□□ -1.72
SPT23YKL020C NSE3Q05541 303 aa4.29□□□□□ -1.72
SPT23YKL020C CMS1Q07897 291 aaKnown RBP4.29□□□□□ -1.72
SPT23YKL020C YIL002W-AQ3E7Z5 69 aa4.29□□□□□ -1.72
SPT23YKL020C SLD2P34252 453 aa4.29□□□□□ -1.72
SPT23YKL020C NUP120P35729 1037 aa4.29□□□□□ -1.72
SPT23YKL020C DAS1P47005 663 aa4.29□□□□□ -1.72
SPT23YKL020C FAP1P53971 965 aa4.29□□□□□ -1.72
SPT23YKL020C KRE28Q04431 385 aa4.29□□□□□ -1.72
SPT23YKL020C RNH1Q04740 348 aa4.29□□□□□ -1.72
SPT23YKL020C VTH1P40438 1549 aa4.29□□□□□ -1.72
SPT23YKL020C VTH2P40890 1549 aa4.29□□□□□ -1.72
SPT23YKL020C KAR9P32526 644 aa4.29□□□□□ -1.72
SPT23YKL020C ANP1P32629 500 aa4.29□□□□□ -1.72
SPT23YKL020C VPS35P34110 944 aa4.29□□□□□ -1.72
SPT23YKL020C APL2P36000 726 aaPredicted RBP4.29□□□□□ -1.72
SPT23YKL020C MRPL40P36534 297 aa4.29□□□□□ -1.72
SPT23YKL020C VPS29P38759 282 aa4.29□□□□□ -1.72
SPT23YKL020C RRP8P38961 392 aaKnown RBP4.29□□□□□ -1.72
SPT23YKL020C DCP2P53550 970 aaKnown RBP4.29□□□□□ -1.72
SPT23YKL020C ATG38Q05789 226 aaKnown RBP4.29□□□□□ -1.72
SPT23YKL020C SIR4P11978 1358 aa4.29□□□□□ -1.72
SPT23YKL020C USO1P25386 1790 aa4.29□□□□□ -1.72
SPT23YKL020C PRT1P06103 763 aaKnown RBP4.28□□□□□ -1.72
SPT23YKL020C SES1P07284 462 aaKnown RBP4.28□□□□□ -1.72
SPT23YKL020C PET112P33893 541 aa4.28□□□□□ -1.72
SPT23YKL020C HCS1P34243 683 aa4.28□□□□□ -1.72
SPT23YKL020C SLX1P38324 304 aa4.28□□□□□ -1.72
SPT23YKL020C RIC1P40395 1056 aa4.28□□□□□ -1.72
SPT23YKL020C MET12P46151 657 aa4.28□□□□□ -1.72
SPT23YKL020C EFM5P53200 248 aaKnown RBP4.28□□□□□ -1.72
SPT23YKL020C DBP9Q06218 594 aaKnown RBP4.28□□□□□ -1.72
SPT23YKL020C GNT1Q12096 491 aa4.28□□□□□ -1.72
SPT23YKL020C LTE1P07866 1435 aa4.28□□□□□ -1.72
SPT23YKL020C KRE5P22023 1365 aa4.28□□□□□ -1.72
SPT23YKL020C TEF1P02994 458 aaKnown RBP4.28□□□□□ -1.72
SPT23YKL020C PLC1P32383 869 aa4.28□□□□□ -1.72
SPT23YKL020C SLA1P32790 1244 aa4.28□□□□□ -1.72
SPT23YKL020C GCR2Q01722 534 aa4.28□□□□□ -1.72
SPT23YKL020C OYE2Q03558 400 aaKnown RBP4.28□□□□□ -1.72
SPT23YKL020C LCB5Q06147 687 aaKnown RBP4.28□□□□□ -1.72
SPT23YKL020C MDM36Q06820 579 aa4.28□□□□□ -1.72
SPT23YKL020C YBL111CQ3E7Y5 667 aa4.28□□□□□ -1.72
SPT23YKL020C PDR18P53756 1333 aa4.28□□□□□ -1.72
SPT23YKL020C BNR1P40450 1375 aa4.27□□□□□ -1.73
SPT23YKL020C CDC37P06101 506 aaKnown RBP4.27□□□□□ -1.73
SPT23YKL020C HOM3P10869 527 aa4.27□□□□□ -1.73
SPT23YKL020C BIK1P11709 440 aa4.27□□□□□ -1.73
SPT23YKL020C KIN1P13185 1064 aa4.27□□□□□ -1.73
SPT23YKL020C KRS1P15180 591 aaKnown RBP4.27□□□□□ -1.73
SPT23YKL020C RTT105P40063 208 aa4.27□□□□□ -1.73
SPT23YKL020C IML2P47031 731 aa4.27□□□□□ -1.73
SPT23YKL020C SXM1Q04175 944 aaKnown RBP4.27□□□□□ -1.73
SPT23YKL020C RSA3Q05942 220 aaKnown RBP4.27□□□□□ -1.73
SPT23YKL020C DPS1P04802 557 aaKnown RBP4.27□□□□□ -1.73
SPT23YKL020C ATE1P16639 503 aa4.27□□□□□ -1.73
SPT23YKL020C CPS1P27614 576 aa4.27□□□□□ -1.73
SPT23YKL020C MET4P32389 672 aa4.27□□□□□ -1.73
SPT23YKL020C SRL3P36167 246 aa4.27□□□□□ -1.73
SPT23YKL020C BFR1P38934 470 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SPT23YKL020C SNX4P47057 423 aa4.27□□□□□ -1.73
SPT23YKL020C RNH70P53331 553 aa4.27□□□□□ -1.73
SPT23YKL020C OMS1Q06668 471 aa4.27□□□□□ -1.73
SPT23YKL020C SWA2Q06677 668 aa4.27□□□□□ -1.73
SPT23YKL020C GRC3Q07845 632 aa4.27□□□□□ -1.73
SPT23YKL020C SMC6Q12749 1114 aa4.27□□□□□ -1.73
SPT23YKL020C NUP192P47054 1683 aa4.27□□□□□ -1.73
SPT23YKL020C STE6P12866 1290 aa4.27□□□□□ -1.73
SPT23YKL020C PRP16P15938 1071 aaPredicted RBP4.27□□□□□ -1.73
SPT23YKL020C TPD3P31383 635 aa4.27□□□□□ -1.73
SPT23YKL020C PTR2P32901 601 aa4.27□□□□□ -1.73
SPT23YKL020C MUD2P36084 527 aaKnown RBP4.27□□□□□ -1.73
SPT23YKL020C UGA2P38067 497 aa4.27□□□□□ -1.73
SPT23YKL020C PEX18P38855 283 aa4.27□□□□□ -1.73
SPT23YKL020C CST6P40535 587 aa4.27□□□□□ -1.73
SPT23YKL020C VID28P40547 921 aa4.27□□□□□ -1.73
SPT23YKL020C CTH1P47976 325 aa4.27□□□□□ -1.73
SPT23YKL020C ECL1P48235 211 aa4.27□□□□□ -1.73
SPT23YKL020C CWC21Q03375 135 aaKnown RBP4.27□□□□□ -1.73
SPT23YKL020C MTC5Q03897 1148 aa4.27□□□□□ -1.73
SPT23YKL020C DPL1Q05567 589 aa4.27□□□□□ -1.73
SPT23YKL020C YPL277CQ08989 487 aa4.27□□□□□ -1.73
SPT23YKL020C SSB1P11484 613 aaKnown RBP4.26□□□□□ -1.73
SPT23YKL020C PMR1P13586 950 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms