RNA–Protein interactions for RNA: YJR022W

LSM8, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM8, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM8YJR022W TY1B-DR4Q07793 1604 aa4.03□□□□□ -1.77
LSM8YJR022W SOD2P00447 233 aa4.02□□□□□ -1.77
LSM8YJR022W TOD6P34219 525 aa4.02□□□□□ -1.77
LSM8YJR022W NNK1P36003 928 aa4.02□□□□□ -1.77
LSM8YJR022W ETP1P38748 585 aaKnown RBP4.02□□□□□ -1.77
LSM8YJR022W RSC4Q02206 625 aa4.02□□□□□ -1.77
LSM8YJR022W GSF2Q04697 403 aaKnown RBP4.02□□□□□ -1.77
LSM8YJR022W MNL2Q12205 849 aa4.02□□□□□ -1.77
LSM8YJR022W TY1A-LR4P0C2I8 440 aaKnown RBP4.01□□□□□ -1.77
LSM8YJR022W TY1A-DR6P0CX70 440 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-ER1P0CX71 440 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-LR2P0CX72 440 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-PLP0CX73 440 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-JR1P0CX74 440 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-LR3P0CX75 440 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-ML2P0CX76 440 aa4.01□□□□□ -1.77
LSM8YJR022W RNH70P53331 553 aa4.01□□□□□ -1.77
LSM8YJR022W YPL277CQ08989 487 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-GR1Q12085 440 aa4.01□□□□□ -1.77
LSM8YJR022W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.01□□□□□ -1.77
LSM8YJR022W TY1A-OLQ92392 440 aaKnown RBP4.01□□□□□ -1.77
LSM8YJR022W VAC8P39968 578 aa4□□□□□ -1.77
LSM8YJR022W IOC3P43596 787 aa4□□□□□ -1.77
LSM8YJR022W VPS16Q03308 798 aa4□□□□□ -1.77
LSM8YJR022W TRS120Q04183 1289 aa4□□□□□ -1.77
LSM8YJR022W GPI13Q07830 1017 aa4□□□□□ -1.77
LSM8YJR022W RPS13P05756 151 aaKnown RBP3.99□□□□□ -1.77
LSM8YJR022W PHO4P07270 312 aaKnown RBP3.99□□□□□ -1.77
LSM8YJR022W ARL1P38116 183 aaKnown RBP3.99□□□□□ -1.77
LSM8YJR022W SAP155P43612 1002 aa3.99□□□□□ -1.77
LSM8YJR022W ATG36P46983 293 aa3.99□□□□□ -1.77
LSM8YJR022W ALD6P54115 500 aaKnown RBP3.99□□□□□ -1.77
LSM8YJR022W UFD2P54860 961 aa3.99□□□□□ -1.77
LSM8YJR022W AVO1Q08236 1176 aa3.99□□□□□ -1.77
LSM8YJR022W PUS7Q08647 676 aaKnown RBP3.99□□□□□ -1.77
LSM8YJR022W PIN2Q12057 282 aa3.99□□□□□ -1.77
LSM8YJR022W ABZ1P37254 787 aaPredicted RBP3.98□□□□□ -1.77
LSM8YJR022W RMD1Q03441 430 aa3.98□□□□□ -1.77
LSM8YJR022W CLU1Q03690 1277 aaKnown RBP3.98□□□□□ -1.77
LSM8YJR022W TPP1Q03796 238 aa3.98□□□□□ -1.77
LSM8YJR022W SPR28Q04921 423 aa3.98□□□□□ -1.77
LSM8YJR022W SSF2Q12153 453 aaPredicted RBP3.98□□□□□ -1.77
LSM8YJR022W CIT2P08679 460 aa3.97□□□□□ -1.77
LSM8YJR022W MCM2P29469 868 aa3.97□□□□□ -1.77
LSM8YJR022W RPT1P33299 467 aaKnown RBP3.97□□□□□ -1.77
LSM8YJR022W FPR3P38911 411 aaKnown RBP3.97□□□□□ -1.77
LSM8YJR022W YJL049WP47048 450 aa3.97□□□□□ -1.77
LSM8YJR022W SNO2P53823 222 aa3.97□□□□□ -1.77
LSM8YJR022W SGS1P35187 1447 aa3.96□□□□□ -1.77
LSM8YJR022W CTS1P29029 562 aa3.96□□□□□ -1.78
LSM8YJR022W RRP14P36080 434 aaKnown RBP3.96□□□□□ -1.78
LSM8YJR022W DAK2P43550 591 aa3.96□□□□□ -1.78
LSM8YJR022W ALG12P53730 551 aa3.96□□□□□ -1.78
LSM8YJR022W RPN4Q03465 531 aa3.96□□□□□ -1.78
LSM8YJR022W NSE3Q05541 303 aa3.96□□□□□ -1.78
LSM8YJR022W TAD3Q9URQ3 322 aa3.96□□□□□ -1.78
LSM8YJR022W TUB2P02557 457 aaKnown RBP3.95□□□□□ -1.78
LSM8YJR022W FLP1P03870 423 aa3.95□□□□□ -1.78
LSM8YJR022W SAM35P14693 329 aa3.95□□□□□ -1.78
LSM8YJR022W GCD6P32501 712 aaKnown RBP3.95□□□□□ -1.78
LSM8YJR022W SRP40P32583 406 aaPredicted RBP3.95□□□□□ -1.78
LSM8YJR022W YKL091CP33324 310 aaKnown RBP3.95□□□□□ -1.78
LSM8YJR022W SHM2P37291 469 aaKnown RBP3.95□□□□□ -1.78
LSM8YJR022W YHL012WP38709 493 aa3.95□□□□□ -1.78
LSM8YJR022W MAD1P40957 749 aa3.95□□□□□ -1.78
LSM8YJR022W NUT1P53114 1132 aa3.95□□□□□ -1.78
LSM8YJR022W BSC2Q05611 235 aa3.95□□□□□ -1.78
LSM8YJR022W PMT7Q06644 662 aa3.95□□□□□ -1.78
LSM8YJR022W CLN2P20438 545 aa3.94□□□□□ -1.78
LSM8YJR022W PRE10P21242 288 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
LSM8YJR022W PPG1P32838 368 aa3.94□□□□□ -1.78
LSM8YJR022W OSW7P43611 510 aa3.94□□□□□ -1.78
LSM8YJR022W FOL2P51601 243 aaKnown RBP3.94□□□□□ -1.78
LSM8YJR022W ESF1Q06344 628 aaKnown RBP3.94□□□□□ -1.78
LSM8YJR022W SWR1Q05471 1514 aa3.94□□□□□ -1.78
LSM8YJR022W YLR358CO13565 187 aa3.93□□□□□ -1.78
LSM8YJR022W CYC8P14922 966 aa3.93□□□□□ -1.78
LSM8YJR022W STI1P15705 589 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
LSM8YJR022W MCM5P29496 775 aaKnown RBP3.93□□□□□ -1.78
LSM8YJR022W EXO5P38289 585 aa3.93□□□□□ -1.78
LSM8YJR022W NMD3P38861 518 aaKnown RBP3.93□□□□□ -1.78
LSM8YJR022W BUD6P41697 788 aa3.93□□□□□ -1.78
LSM8YJR022W SLS1P42900 643 aa3.93□□□□□ -1.78
LSM8YJR022W YJR008WP47085 338 aa3.93□□□□□ -1.78
LSM8YJR022W YGR122WP53272 402 aa3.93□□□□□ -1.78
LSM8YJR022W YNL011CP53980 444 aa3.93□□□□□ -1.78
LSM8YJR022W YLR257WQ06146 321 aaKnown RBP3.93□□□□□ -1.78
LSM8YJR022W UBX5Q06682 500 aa3.93□□□□□ -1.78
LSM8YJR022W INO80P53115 1489 aa3.92□□□□□ -1.78
LSM8YJR022W MDL2P33311 773 aa3.92□□□□□ -1.78
LSM8YJR022W VPS35P34110 944 aa3.92□□□□□ -1.78
LSM8YJR022W MNR2P35724 969 aa3.92□□□□□ -1.78
LSM8YJR022W PBP2P38151 413 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
LSM8YJR022W TAT2P38967 592 aa3.92□□□□□ -1.78
LSM8YJR022W YAR028WP39548 234 aa3.92□□□□□ -1.78
LSM8YJR022W RPS26AP39938 119 aaKnown RBP3.92□□□□□ -1.78
LSM8YJR022W RPS26BP39939 119 aaKnown RBP3.92□□□□□ -1.78
LSM8YJR022W NUG1P40010 520 aaKnown RBP3.92□□□□□ -1.78
LSM8YJR022W RTS3P53289 263 aa3.92□□□□□ -1.78
LSM8YJR022W CDC55Q00362 526 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms