RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C RIM20Q12033 661 aa4.16□□□□□ -1.74
VPS53YJL029C TY1B-AO13527 1196 aaKnown RBP4.16□□□□□ -1.74
VPS53YJL029C PRE10P21242 288 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
VPS53YJL029C SEC8P32855 1065 aa4.16□□□□□ -1.74
VPS53YJL029C VPS8P39702 1274 aa4.16□□□□□ -1.74
VPS53YJL029C PIB2P53191 635 aa4.16□□□□□ -1.74
VPS53YJL029C ULP1Q02724 621 aa4.16□□□□□ -1.74
VPS53YJL029C EAR1Q03212 550 aa4.16□□□□□ -1.74
VPS53YJL029C RPP1BP10622 106 aaKnown RBP4.15□□□□□ -1.74
VPS53YJL029C SRS2P12954 1174 aa4.15□□□□□ -1.74
VPS53YJL029C FOL1P53848 824 aa4.15□□□□□ -1.74
VPS53YJL029C UFD2P54860 961 aa4.15□□□□□ -1.74
VPS53YJL029C RAD18P10862 487 aa4.15□□□□□ -1.75
VPS53YJL029C ANP1P32629 500 aa4.15□□□□□ -1.75
VPS53YJL029C TGL1P34163 548 aa4.15□□□□□ -1.75
VPS53YJL029C AAP1P37898 856 aaKnown RBP4.15□□□□□ -1.75
VPS53YJL029C LDH1P38139 375 aa4.15□□□□□ -1.75
VPS53YJL029C VPS62P53285 467 aa4.15□□□□□ -1.75
VPS53YJL029C MYO5Q04439 1219 aaKnown RBP4.15□□□□□ -1.75
VPS53YJL029C MAM3Q12296 706 aa4.15□□□□□ -1.75
VPS53YJL029C ECM29P38737 1868 aa4.14□□□□□ -1.75
VPS53YJL029C MYO1P08964 1928 aa4.14□□□□□ -1.75
VPS53YJL029C NUC1P08466 329 aa4.14□□□□□ -1.75
VPS53YJL029C CHS3P29465 1165 aa4.14□□□□□ -1.75
VPS53YJL029C VPS45P38932 577 aa4.14□□□□□ -1.75
VPS53YJL029C SPO22P40511 975 aa4.14□□□□□ -1.75
VPS53YJL029C REF2P42073 533 aaPredicted RBP4.14□□□□□ -1.75
VPS53YJL029C LSB1P53281 241 aa4.14□□□□□ -1.75
VPS53YJL029C SPH1Q06160 661 aa4.14□□□□□ -1.75
VPS53YJL029C FPR4Q06205 392 aaPredicted RBP4.14□□□□□ -1.75
VPS53YJL029C MDM20Q12387 796 aaKnown RBP4.14□□□□□ -1.75
VPS53YJL029C VAS1P07806 1104 aaKnown RBP4.14□□□□□ -1.75
VPS53YJL029C YGR273CP53329 174 aa4.14□□□□□ -1.75
VPS53YJL029C RPT6Q01939 405 aaKnown RBP4.14□□□□□ -1.75
VPS53YJL029C HEM1P09950 548 aaPredicted RBP4.13□□□□□ -1.75
VPS53YJL029C RIT1P23796 513 aa4.13□□□□□ -1.75
VPS53YJL029C PHO88P38264 188 aaPredicted RBP4.13□□□□□ -1.75
VPS53YJL029C VPS53P47061 822 aa4.13□□□□□ -1.75
VPS53YJL029C VPS30Q02948 557 aa4.13□□□□□ -1.75
VPS53YJL029C CSC1Q06538 782 aa4.13□□□□□ -1.75
VPS53YJL029C ISA1Q07821 250 aaPredicted RBP4.13□□□□□ -1.75
VPS53YJL029C COX6P00427 148 aa4.13□□□□□ -1.75
VPS53YJL029C MAK31P23059 88 aa4.13□□□□□ -1.75
VPS53YJL029C RPL8BP29453 256 aaKnown RBP4.13□□□□□ -1.75
VPS53YJL029C RER2P35196 286 aa4.13□□□□□ -1.75
VPS53YJL029C OPY1P38271 328 aa4.13□□□□□ -1.75
VPS53YJL029C TPM2P40414 161 aa4.13□□□□□ -1.75
VPS53YJL029C CLA4P48562 842 aa4.13□□□□□ -1.75
VPS53YJL029C BNI4P53858 892 aa4.13□□□□□ -1.75
VPS53YJL029C GCR2Q01722 534 aa4.13□□□□□ -1.75
VPS53YJL029C YML020WQ03722 664 aa4.13□□□□□ -1.75
VPS53YJL029C CHO2P05374 869 aaKnown RBP4.12□□□□□ -1.75
VPS53YJL029C KRS1P15180 591 aaKnown RBP4.12□□□□□ -1.75
VPS53YJL029C PEP3P27801 918 aa4.12□□□□□ -1.75
VPS53YJL029C MCM4P30665 933 aaKnown RBP4.12□□□□□ -1.75
VPS53YJL029C UTR4P32626 227 aa4.12□□□□□ -1.75
VPS53YJL029C KSP1P38691 1029 aaKnown RBP4.12□□□□□ -1.75
VPS53YJL029C YJR107WP47145 328 aa4.12□□□□□ -1.75
VPS53YJL029C YPL034WQ03083 165 aa4.12□□□□□ -1.75
VPS53YJL029C SUT2Q12286 268 aa4.12□□□□□ -1.75
VPS53YJL029C SIS2P36024 562 aa4.12□□□□□ -1.75
VPS53YJL029C MCR1P36060 302 aaKnown RBP4.12□□□□□ -1.75
VPS53YJL029C FIR1P40020 876 aa4.12□□□□□ -1.75
VPS53YJL029C YDR090CQ03193 310 aa4.12□□□□□ -1.75
VPS53YJL029C RMD1Q03441 430 aa4.12□□□□□ -1.75
VPS53YJL029C SAM2P19358 384 aaKnown RBP4.11□□□□□ -1.75
VPS53YJL029C RNR3P21672 869 aaKnown RBP4.11□□□□□ -1.75
VPS53YJL029C PRO3P32263 286 aaKnown RBP4.11□□□□□ -1.75
VPS53YJL029C TFC4P33339 1025 aa4.11□□□□□ -1.75
VPS53YJL029C GPT2P36148 743 aa4.11□□□□□ -1.75
VPS53YJL029C MAL31P38156 614 aa4.11□□□□□ -1.75
VPS53YJL029C MDM1Q01846 1127 aa4.11□□□□□ -1.75
VPS53YJL029C ECM23Q02710 187 aa4.11□□□□□ -1.75
VPS53YJL029C DUS4Q06063 367 aa4.11□□□□□ -1.75
VPS53YJL029C EST2Q06163 884 aa4.11□□□□□ -1.75
VPS53YJL029C VIP1Q06685 1146 aaKnown RBP4.11□□□□□ -1.75
VPS53YJL029C YOR131CQ12486 218 aa4.11□□□□□ -1.75
VPS53YJL029C SNA3P14359 133 aa4.11□□□□□ -1.75
VPS53YJL029C ASF1P32447 279 aa4.11□□□□□ -1.75
VPS53YJL029C CCT3P39077 534 aaKnown RBP4.11□□□□□ -1.75
VPS53YJL029C TMA64Q04600 565 aaKnown RBP4.11□□□□□ -1.75
VPS53YJL029C TFC6Q06339 672 aa4.11□□□□□ -1.75
VPS53YJL029C DSE3Q08729 430 aa4.11□□□□□ -1.75
VPS53YJL029C ERP3Q12403 225 aa4.11□□□□□ -1.75
VPS53YJL029C SRP54P20424 541 aaKnown RBP4.1□□□□□ -1.75
VPS53YJL029C UGA4P32837 571 aa4.1□□□□□ -1.75
VPS53YJL029C UIP5P36137 443 aa4.1□□□□□ -1.75
VPS53YJL029C LIF1P53150 421 aa4.1□□□□□ -1.75
VPS53YJL029C YDR344CQ05510 147 aa4.1□□□□□ -1.75
VPS53YJL029C MPC54Q08550 464 aa4.1□□□□□ -1.75
VPS53YJL029C TRM11Q12463 433 aa4.1□□□□□ -1.75
VPS53YJL029C FKS1P38631 1876 aaKnown RBP4.1□□□□□ -1.75
VPS53YJL029C AFT1P22149 690 aa4.1□□□□□ -1.75
VPS53YJL029C TKL1P23254 680 aaKnown RBP4.1□□□□□ -1.75
VPS53YJL029C SRO9P25567 434 aaKnown RBP4.1□□□□□ -1.75
VPS53YJL029C RME1P32338 300 aaKnown RBP4.1□□□□□ -1.75
VPS53YJL029C SRP40P32583 406 aaPredicted RBP4.1□□□□□ -1.75
VPS53YJL029C BCS1P32839 456 aa4.1□□□□□ -1.75
VPS53YJL029C SOL3P38858 249 aa4.1□□□□□ -1.75
VPS53YJL029C HMF1P40037 129 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms