RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	YDR306C	Q06640	478 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	RTT109	Q07794	436 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	SAC3	P46674	1301 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SGN1	YIR001C	UTR2	P32623	467 aa		4.61	□□□□□ -1.67
SGN1	YIR001C	TBS1	P38114	1094 aa		4.61	□□□□□ -1.67
SGN1	YIR001C	YJR098C	P47139	656 aa		4.61	□□□□□ -1.67
SGN1	YIR001C	ATG1	P53104	897 aa		4.61	□□□□□ -1.67
SGN1	YIR001C	ULP1	Q02724	621 aa		4.61	□□□□□ -1.67
SGN1	YIR001C	MRX10	Q05648	414 aa		4.61	□□□□□ -1.67
SGN1	YIR001C	NOP8	Q08287	484 aa	Predicted RBP	4.61	□□□□□ -1.67
SGN1	YIR001C	ECM29	P38737	1868 aa		4.6	□□□□□ -1.67
SGN1	YIR001C	SOH1	P38633	127 aa		4.6	□□□□□ -1.67
SGN1	YIR001C	ACO2	P39533	789 aa		4.6	□□□□□ -1.67
SGN1	YIR001C	YFL034W	P43564	1073 aa		4.6	□□□□□ -1.67
SGN1	YIR001C	LSB3	P43603	459 aa	Known RBP	4.6	□□□□□ -1.67
SGN1	YIR001C	NET1	P47035	1189 aa		4.6	□□□□□ -1.67
SGN1	YIR001C	CAF120	P53836	1060 aa		4.6	□□□□□ -1.67
SGN1	YIR001C	YVH1	Q02256	364 aa	Known RBP	4.6	□□□□□ -1.67
SGN1	YIR001C	ADR1	P07248	1323 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	RAD53	P22216	821 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	RPT3	P33298	428 aa	Known RBP	4.59	□□□□□ -1.67
SGN1	YIR001C	OCT1	P35999	772 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	ERG7	P38604	731 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	UBP12	P39538	1254 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	YFH7	P43591	353 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	VPS13	Q07878	3144 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	PPM2	Q08282	695 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	TY1A-BL	Q12266	440 aa		4.59	□□□□□ -1.67
SGN1	YIR001C	ENO1	P00924	437 aa	Known RBP	4.58	□□□□□ -1.68
SGN1	YIR001C	PMA1	P05030	918 aa	Known RBP	4.58	□□□□□ -1.68
SGN1	YIR001C	DAT1	P13483	248 aa	Known RBP	4.58	□□□□□ -1.68
SGN1	YIR001C	DLD1	P32891	587 aa		4.58	□□□□□ -1.68
SGN1	YIR001C	LDH1	P38139	375 aa		4.58	□□□□□ -1.68
SGN1	YIR001C	KEL1	P38853	1164 aa	Known RBP	4.58	□□□□□ -1.68
SGN1	YIR001C	VPS62	P53285	467 aa		4.58	□□□□□ -1.68
SGN1	YIR001C	WTM2	Q12206	467 aa		4.58	□□□□□ -1.68
SGN1	YIR001C	RDS2	P19541	446 aa	Known RBP	4.57	□□□□□ -1.68
SGN1	YIR001C	ADP1	P25371	1049 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	SWC3	P31376	625 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	DAL1	P32375	460 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	MCD4	P36051	919 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	HAL5	P38970	855 aa	Known RBP	4.57	□□□□□ -1.68
SGN1	YIR001C	VAB2	P40003	282 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	YGR035C	P53222	116 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	YGR122W	P53272	402 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	EAR1	Q03212	550 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	CFT2	Q12102	859 aa	Predicted RBP	4.57	□□□□□ -1.68
SGN1	YIR001C	TY3A-G	Q12173	290 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	TY3A-I	Q99219	290 aa		4.57	□□□□□ -1.68
SGN1	YIR001C	PEP12	P32854	288 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	MDL2	P33311	773 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	YBL028C	P38202	106 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	ACA1	P39970	489 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	LYS14	P40971	790 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	HEF3	P53978	1044 aa	Known RBP	4.56	□□□□□ -1.68
SGN1	YIR001C	HDA3	Q06623	655 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	YDL144C	Q07589	356 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	RRI2	Q12348	645 aa		4.56	□□□□□ -1.68
SGN1	YIR001C	TAO3	P40468	2376 aa		4.55	□□□□□ -1.68
SGN1	YIR001C	CDC60	P26637	1090 aa	Known RBP	4.55	□□□□□ -1.68
SGN1	YIR001C	PTK1	P36002	662 aa	Predicted RBP	4.55	□□□□□ -1.68
SGN1	YIR001C	OSH7	P38755	437 aa		4.55	□□□□□ -1.68
SGN1	YIR001C	SLX8	P40072	274 aa		4.55	□□□□□ -1.68
SGN1	YIR001C	NOP2	P40991	618 aa	Known RBP	4.55	□□□□□ -1.68
SGN1	YIR001C	UBR2	Q07963	1872 aa		4.55	□□□□□ -1.68
SGN1	YIR001C	SRS2	P12954	1174 aa		4.54	□□□□□ -1.68
SGN1	YIR001C	RAD24	P32641	659 aa		4.54	□□□□□ -1.68
SGN1	YIR001C	AIM9	P40053	627 aa	Known RBP	4.54	□□□□□ -1.68
SGN1	YIR001C	SUM1	P46676	1062 aa		4.54	□□□□□ -1.68
SGN1	YIR001C	INM2	Q05533	292 aa		4.54	□□□□□ -1.68
SGN1	YIR001C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SGN1	YIR001C	PCL8	Q08966	492 aa		4.54	□□□□□ -1.68
SGN1	YIR001C	TSC13	Q99190	310 aa		4.54	□□□□□ -1.68
SGN1	YIR001C	FLO1	P32768	1537 aa		4.54	□□□□□ -1.68
SGN1	YIR001C	SNF3	P10870	884 aa		4.53	□□□□□ -1.68
SGN1	YIR001C	SEC18	P18759	758 aa	Known RBP	4.53	□□□□□ -1.68
SGN1	YIR001C	WHI3	P34761	661 aa	Known RBP	4.53	□□□□□ -1.68
SGN1	YIR001C	AHP1	P38013	176 aa	Known RBP	4.53	□□□□□ -1.68
SGN1	YIR001C	FIR1	P40020	876 aa		4.53	□□□□□ -1.68
SGN1	YIR001C	YIR042C	P40586	236 aa		4.53	□□□□□ -1.68
SGN1	YIR001C	YFL040W	P43562	540 aa		4.53	□□□□□ -1.68
SGN1	YIR001C	SUB2	Q07478	446 aa	Known RBP	4.53	□□□□□ -1.68
SGN1	YIR001C	YOR131C	Q12486	218 aa		4.53	□□□□□ -1.68
SGN1	YIR001C	CDC19	P00549	500 aa	Known RBP	4.52	□□□□□ -1.69
SGN1	YIR001C	TUB2	P02557	457 aa	Known RBP	4.52	□□□□□ -1.69
SGN1	YIR001C	HAP4	P14064	554 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	PHO87	P25360	923 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	GLO3	P38682	493 aa	Known RBP	4.52	□□□□□ -1.69
SGN1	YIR001C	SSN3	P39073	555 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	BOI2	P39969	1040 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	YIR007W	P40566	764 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	ROG3	P43602	733 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	UBP15	P50101	1230 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	PIP2	P52960	996 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	SNU71	P53207	620 aa	Known RBP	4.52	□□□□□ -1.69
SGN1	YIR001C	YPL034W	Q03083	165 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	TY1A-MR1	Q04215	440 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	ECM30	Q06673	1274 aa		4.52	□□□□□ -1.69
SGN1	YIR001C	ICL2	Q12031	575 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms