RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C STU2P46675 888 aa8.59□□□□□ -1.03
SNP1YIL061C HIS4P00815 799 aaKnown RBP8.58□□□□□ -1.04
SNP1YIL061C THR4P16120 514 aaKnown RBP8.58□□□□□ -1.04
SNP1YIL061C ADE17P38009 592 aaKnown RBP8.58□□□□□ -1.04
SNP1YIL061C ESC2Q06340 456 aa8.58□□□□□ -1.04
SNP1YIL061C TOP1P04786 769 aa8.57□□□□□ -1.04
SNP1YIL061C SAC6P32599 642 aaKnown RBP8.57□□□□□ -1.04
SNP1YIL061C PXL1P36166 706 aa8.57□□□□□ -1.04
SNP1YIL061C BCD1P38772 366 aa8.57□□□□□ -1.04
SNP1YIL061C THI6P41835 540 aa8.57□□□□□ -1.04
SNP1YIL061C YGR153WP48238 217 aa8.57□□□□□ -1.04
SNP1YIL061C ATG20Q07528 640 aa8.57□□□□□ -1.04
SNP1YIL061C YDL124WQ07551 312 aaKnown RBP8.57□□□□□ -1.04
SNP1YIL061C TMA16Q08687 178 aa8.57□□□□□ -1.04
SNP1YIL061C GSC2P40989 1895 aa8.56□□□□□ -1.04
SNP1YIL061C FOB1O13329 566 aa8.56□□□□□ -1.04
SNP1YIL061C MSM1P22438 575 aa8.56□□□□□ -1.04
SNP1YIL061C ADP1P25371 1049 aa8.56□□□□□ -1.04
SNP1YIL061C SEC20P28791 383 aa8.56□□□□□ -1.04
SNP1YIL061C YKR023WP36119 530 aaKnown RBP8.56□□□□□ -1.04
SNP1YIL061C CDC27P38042 758 aa8.56□□□□□ -1.04
SNP1YIL061C CST26P38226 397 aa8.56□□□□□ -1.04
SNP1YIL061C ASE1P50275 885 aa8.56□□□□□ -1.04
SNP1YIL061C SNU71P53207 620 aaKnown RBP8.56□□□□□ -1.04
SNP1YIL061C TRS120Q04183 1289 aa8.56□□□□□ -1.04
SNP1YIL061C GFD1Q04839 188 aaKnown RBP8.56□□□□□ -1.04
SNP1YIL061C HCR1Q05775 265 aaKnown RBP8.56□□□□□ -1.04
SNP1YIL061C SLK19Q08581 821 aaKnown RBP8.56□□□□□ -1.04
SNP1YIL061C AFT2Q08957 416 aa8.56□□□□□ -1.04
SNP1YIL061C MYO1P08964 1928 aa8.55□□□□□ -1.04
SNP1YIL061C PHO13P19881 312 aa8.55□□□□□ -1.04
SNP1YIL061C CDC15P27636 974 aa8.55□□□□□ -1.04
SNP1YIL061C SPC110P32380 944 aa8.55□□□□□ -1.04
SNP1YIL061C MNN4P36044 1178 aa8.55□□□□□ -1.04
SNP1YIL061C YBL028CP38202 106 aa8.55□□□□□ -1.04
SNP1YIL061C VPS75P53853 264 aa8.55□□□□□ -1.04
SNP1YIL061C PMA1P05030 918 aaKnown RBP8.54□□□□□ -1.04
SNP1YIL061C SAM2P19358 384 aaKnown RBP8.54□□□□□ -1.04
SNP1YIL061C RAD53P22216 821 aa8.54□□□□□ -1.04
SNP1YIL061C SAS3P34218 831 aa8.54□□□□□ -1.04
SNP1YIL061C MNR2P35724 969 aa8.54□□□□□ -1.04
SNP1YIL061C STV1P37296 890 aa8.54□□□□□ -1.04
SNP1YIL061C VPS45P38932 577 aa8.54□□□□□ -1.04
SNP1YIL061C UBP9P39967 754 aa8.54□□□□□ -1.04
SNP1YIL061C ATG32P40458 529 aa8.54□□□□□ -1.04
SNP1YIL061C VTC2P43585 828 aa8.54□□□□□ -1.04
SNP1YIL061C STR2P47164 639 aa8.54□□□□□ -1.04
SNP1YIL061C YGR237CP50089 785 aa8.54□□□□□ -1.04
SNP1YIL061C BNI5P53890 448 aaKnown RBP8.54□□□□□ -1.04
SNP1YIL061C SMD2Q06217 110 aaKnown RBP8.54□□□□□ -1.04
SNP1YIL061C VIP1Q06685 1146 aaKnown RBP8.54□□□□□ -1.04
SNP1YIL061C TPM2P40414 161 aa8.53□□□□□ -1.04
SNP1YIL061C CIT3P43635 486 aa8.53□□□□□ -1.04
SNP1YIL061C UBA2P52488 636 aa8.53□□□□□ -1.04
SNP1YIL061C DSE4P53753 1117 aa8.53□□□□□ -1.04
SNP1YIL061C PSR2Q07949 397 aa8.53□□□□□ -1.04
SNP1YIL061C RPL8AP17076 256 aaKnown RBP8.52□□□□□ -1.05
SNP1YIL061C CKA2P19454 339 aa8.52□□□□□ -1.05
SNP1YIL061C GLC3P32775 704 aa8.52□□□□□ -1.05
SNP1YIL061C KEL1P38853 1164 aaKnown RBP8.52□□□□□ -1.05
SNP1YIL061C TIF4631P39935 952 aaKnown RBP8.52□□□□□ -1.05
SNP1YIL061C AIP1P46680 615 aaKnown RBP8.52□□□□□ -1.05
SNP1YIL061C VPS4P52917 437 aa8.52□□□□□ -1.05
SNP1YIL061C SDA1P53313 767 aaKnown RBP8.52□□□□□ -1.05
SNP1YIL061C TRM44Q02648 567 aaKnown RBP8.52□□□□□ -1.05
SNP1YIL061C SEN54Q02825 467 aaPredicted RBP8.52□□□□□ -1.05
SNP1YIL061C CSM3Q04659 317 aa8.52□□□□□ -1.05
SNP1YIL061C TUB2P02557 457 aaKnown RBP8.51□□□□□ -1.05
SNP1YIL061C TUF1P02992 437 aaKnown RBP8.51□□□□□ -1.05
SNP1YIL061C PDC1P06169 563 aaKnown RBP8.51□□□□□ -1.05
SNP1YIL061C SRO9P25567 434 aaKnown RBP8.51□□□□□ -1.05
SNP1YIL061C MFT1P33441 392 aaKnown RBP8.51□□□□□ -1.05
SNP1YIL061C YET1P35723 206 aa8.51□□□□□ -1.05
SNP1YIL061C SAP190P36123 1033 aa8.51□□□□□ -1.05
SNP1YIL061C ERG7P38604 731 aa8.51□□□□□ -1.05
SNP1YIL061C TCB2P48231 1178 aa8.51□□□□□ -1.05
SNP1YIL061C YGR117CP53270 476 aa8.51□□□□□ -1.05
SNP1YIL061C LSB1P53281 241 aa8.51□□□□□ -1.05
SNP1YIL061C FPK1P53739 893 aa8.51□□□□□ -1.05
SNP1YIL061C EBS1Q03466 884 aaKnown RBP8.51□□□□□ -1.05
SNP1YIL061C LAP2Q10740 671 aa8.51□□□□□ -1.05
SNP1YIL061C CDC37P06101 506 aaKnown RBP8.5□□□□□ -1.05
SNP1YIL061C MIP1P15801 1254 aa8.5□□□□□ -1.05
SNP1YIL061C GAP1P19145 602 aaPredicted RBP8.5□□□□□ -1.05
SNP1YIL061C ISY1P21374 235 aaPredicted RBP8.5□□□□□ -1.05
SNP1YIL061C MRC1P25588 1096 aa8.5□□□□□ -1.05
SNP1YIL061C PET10P36139 283 aa8.5□□□□□ -1.05
SNP1YIL061C SHM1P37292 490 aaPredicted RBP8.5□□□□□ -1.05
SNP1YIL061C PAN5P38787 379 aa8.5□□□□□ -1.05
SNP1YIL061C MGA2P40578 1113 aa8.5□□□□□ -1.05
SNP1YIL061C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
SNP1YIL061C LSC2P53312 427 aa8.5□□□□□ -1.05
SNP1YIL061C SPP382Q06411 708 aaPredicted RBP8.5□□□□□ -1.05
SNP1YIL061C SUE1Q06524 206 aa8.5□□□□□ -1.05
SNP1YIL061C YCG1Q06680 1035 aa8.5□□□□□ -1.05
SNP1YIL061C APL4Q12028 832 aa8.5□□□□□ -1.05
SNP1YIL061C SPO11P23179 398 aa8.49□□□□□ -1.05
SNP1YIL061C LEO1P38439 464 aa8.49□□□□□ -1.05
SNP1YIL061C CTM1P38818 585 aa8.49□□□□□ -1.05
SNP1YIL061C NIT1P40447 199 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms