RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	ECM23	Q02710	187 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	ADR1	P07248	1323 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	MER1	P16523	270 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	VMA8	P32610	256 aa	Known RBP	4.92	□□□□□ -1.62
PFK1	YGR240C	EXO84	P38261	753 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	YTA6	P40328	754 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	RAD17	P48581	401 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	CWC21	Q03375	135 aa	Known RBP	4.92	□□□□□ -1.62
PFK1	YGR240C	SAS4	Q04003	481 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	DPH6	Q12429	685 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	RGP1	P16664	663 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	THI4	P32318	326 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	PEP12	P32854	288 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	ETP1	P38748	585 aa	Known RBP	4.92	□□□□□ -1.62
PFK1	YGR240C	RTT105	P40063	208 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	SPC105	P53148	917 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	ENO2	P00925	437 aa	Known RBP	4.92	□□□□□ -1.62
PFK1	YGR240C	TRK1	P12685	1235 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	MRPL25	P23369	157 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	GRX1	P25373	110 aa	Known RBP	4.92	□□□□□ -1.62
PFK1	YGR240C	POL4	P25615	582 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	PXA2	P34230	853 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	GCD10	P41814	478 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
PFK1	YGR240C	SHE10	P53075	577 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	FOX2	Q02207	900 aa	Known RBP	4.92	□□□□□ -1.62
PFK1	YGR240C	SPR28	Q04921	423 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	TYW1	Q08960	810 aa	Known RBP	4.92	□□□□□ -1.62
PFK1	YGR240C	REC8	Q12188	680 aa		4.92	□□□□□ -1.62
PFK1	YGR240C	RPO41	P13433	1351 aa	Known RBP	4.91	□□□□□ -1.62
PFK1	YGR240C	COQ8	P27697	501 aa		4.91	□□□□□ -1.62
PFK1	YGR240C	SMY1	P32364	656 aa	Known RBP	4.91	□□□□□ -1.62
PFK1	YGR240C	FPK1	P53739	893 aa		4.91	□□□□□ -1.62
PFK1	YGR240C	TGL2	P54857	326 aa		4.91	□□□□□ -1.62
PFK1	YGR240C	BUL2	Q03758	920 aa	Known RBP	4.91	□□□□□ -1.62
PFK1	YGR240C	CWC15	Q03772	175 aa	Known RBP	4.91	□□□□□ -1.62
PFK1	YGR240C	NUT2	Q06213	157 aa		4.91	□□□□□ -1.62
PFK1	YGR240C	SMD2	Q06217	110 aa	Known RBP	4.91	□□□□□ -1.62
PFK1	YGR240C	DBP9	Q06218	594 aa	Known RBP	4.91	□□□□□ -1.62
PFK1	YGR240C	YRM1	Q12340	786 aa		4.91	□□□□□ -1.62
PFK1	YGR240C	SWC3	P31376	625 aa		4.91	□□□□□ -1.62
PFK1	YGR240C	MNT3	P40549	630 aa		4.91	□□□□□ -1.62
PFK1	YGR240C	SPN1	Q06505	410 aa	Predicted RBP	4.91	□□□□□ -1.62
PFK1	YGR240C	GLK1	P17709	500 aa	Known RBP	4.9	□□□□□ -1.62
PFK1	YGR240C	PDI1	P17967	522 aa	Known RBP	4.9	□□□□□ -1.62
PFK1	YGR240C	RPB4	P20433	221 aa	Predicted RBP	4.9	□□□□□ -1.62
PFK1	YGR240C	MOT2	P34909	587 aa	Known RBP	4.9	□□□□□ -1.62
PFK1	YGR240C	YMR124W	P39523	943 aa	Known RBP	4.9	□□□□□ -1.62
PFK1	YGR240C	RSC8	P43609	557 aa	Known RBP	4.9	□□□□□ -1.62
PFK1	YGR240C	UBA2	P52488	636 aa		4.9	□□□□□ -1.62
PFK1	YGR240C	REX2	P54964	269 aa	Known RBP	4.9	□□□□□ -1.62
PFK1	YGR240C	LAP2	Q10740	671 aa		4.9	□□□□□ -1.62
PFK1	YGR240C	MED1	Q12321	566 aa		4.9	□□□□□ -1.62
PFK1	YGR240C	YRF1-4	O13559	1382 aa		4.9	□□□□□ -1.63
PFK1	YGR240C	SST2	P11972	698 aa	Known RBP	4.9	□□□□□ -1.63
PFK1	YGR240C	SUI2	P20459	304 aa	Known RBP	4.9	□□□□□ -1.63
PFK1	YGR240C	PTH2	P34222	208 aa		4.9	□□□□□ -1.63
PFK1	YGR240C	YER034W	P40022	185 aa	Known RBP	4.9	□□□□□ -1.63
PFK1	YGR240C	ARB1	P40024	610 aa	Known RBP	4.9	□□□□□ -1.63
PFK1	YGR240C	SAE2	P46946	345 aa		4.9	□□□□□ -1.63
PFK1	YGR240C	RMD1	Q03441	430 aa		4.9	□□□□□ -1.63
PFK1	YGR240C	YMR111C	Q04461	462 aa	Predicted RBP	4.9	□□□□□ -1.63
PFK1	YGR240C	AOS1	Q06624	347 aa		4.9	□□□□□ -1.63
PFK1	YGR240C	REH1	Q06709	432 aa		4.9	□□□□□ -1.63
PFK1	YGR240C	TRS33	Q99394	268 aa		4.9	□□□□□ -1.63
PFK1	YGR240C	RPL8A	P17076	256 aa	Known RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	DAL80	P26343	269 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	RIM21	P48565	533 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	AAD16	Q02895	342 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	RRB1	Q04225	511 aa	Known RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	BMS1	Q08965	1183 aa	Known RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	YRF1-3	P0CX14	1859 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	YRF1-7	P0CX15	1859 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	YRF1-6	P53819	1859 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	CLN1	P20437	546 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PFK1	YGR240C	TRZ1	P36159	838 aa	Predicted RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	ALA1	P40825	983 aa	Known RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	SET2	P46995	733 aa	Known RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	RRP46	P53256	223 aa	Predicted RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	APC2	Q12440	853 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	MIP1	P15801	1254 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	KAR3	P17119	729 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	IMP2'	P32351	346 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	KDX1	P36005	433 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	UBX7	P38349	436 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	YGR237C	P50089	785 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	PIP2	P52960	996 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	YML131W	Q03102	365 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	ATG38	Q05789	226 aa	Known RBP	4.89	□□□□□ -1.63
PFK1	YGR240C	ESC8	Q08119	714 aa		4.89	□□□□□ -1.63
PFK1	YGR240C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PFK1	YGR240C	SIR4	P11978	1358 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	RIP-Chip
PFK1	YGR240C	DEP1	P31385	405 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	SGM1	P47166	707 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	CWC24	P53769	259 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	ALF1	P53904	254 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	NSE5	Q03718	556 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	PSR2	Q07949	397 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms