RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W SEC23P15303 768 aaKnown RBP4.03□□□□□ -1.76
NIC96YFR002W NNK1P36003 928 aa4.03□□□□□ -1.76
NIC96YFR002W YAR028WP39548 234 aa4.03□□□□□ -1.76
NIC96YFR002W YJR107WP47145 328 aa4.02□□□□□ -1.77
NIC96YFR002W RCM1P53972 490 aa4.02□□□□□ -1.77
NIC96YFR002W YOR059CQ08448 450 aaKnown RBP4.02□□□□□ -1.77
NIC96YFR002W YVC1Q12324 675 aa4.02□□□□□ -1.77
NIC96YFR002W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
NIC96YFR002W HEM3P28789 327 aa4.02□□□□□ -1.77
NIC96YFR002W MCM2P29469 868 aa4.02□□□□□ -1.77
NIC96YFR002W CYC8P14922 966 aa4.01□□□□□ -1.77
NIC96YFR002W PRE9P23638 258 aaKnown RBP4.01□□□□□ -1.77
NIC96YFR002W RPS26AP39938 119 aaKnown RBP4.01□□□□□ -1.77
NIC96YFR002W RPS26BP39939 119 aaKnown RBP4.01□□□□□ -1.77
NIC96YFR002W FYV10P40492 516 aa4.01□□□□□ -1.77
NIC96YFR002W RAD2P07276 1031 aa4.01□□□□□ -1.77
NIC96YFR002W MGE1P38523 228 aa4.01□□□□□ -1.77
NIC96YFR002W SPR28Q04921 423 aa4.01□□□□□ -1.77
NIC96YFR002W PUS7Q08647 676 aaKnown RBP4.01□□□□□ -1.77
NIC96YFR002W MCD1Q12158 566 aa4□□□□□ -1.77
NIC96YFR002W RET1P22276 1149 aaKnown RBP4□□□□□ -1.77
NIC96YFR002W NMD3P38861 518 aaKnown RBP4□□□□□ -1.77
NIC96YFR002W PEX7P39108 375 aa4□□□□□ -1.77
NIC96YFR002W RSA3Q05942 220 aaKnown RBP4□□□□□ -1.77
NIC96YFR002W YLR257WQ06146 321 aaKnown RBP4□□□□□ -1.77
NIC96YFR002W AFG2P32794 780 aa3.99□□□□□ -1.77
NIC96YFR002W ADD66P36040 267 aa3.99□□□□□ -1.77
NIC96YFR002W MRPS18P42847 217 aa3.99□□□□□ -1.77
NIC96YFR002W YNR063WP53749 607 aa3.99□□□□□ -1.77
NIC96YFR002W TPP1Q03796 238 aa3.99□□□□□ -1.77
NIC96YFR002W RKM2Q03942 479 aa3.99□□□□□ -1.77
NIC96YFR002W TRE1Q08919 783 aa3.99□□□□□ -1.77
NIC96YFR002W DNA2P38859 1522 aa3.99□□□□□ -1.77
NIC96YFR002W GNP1P48813 663 aa3.98□□□□□ -1.77
NIC96YFR002W EST2Q06163 884 aa3.98□□□□□ -1.77
NIC96YFR002W HDA2Q06629 674 aa3.98□□□□□ -1.77
NIC96YFR002W LAP2Q10740 671 aa3.98□□□□□ -1.77
NIC96YFR002W NSI1Q12457 570 aa3.98□□□□□ -1.77
NIC96YFR002W SEC8P32855 1065 aa3.97□□□□□ -1.77
NIC96YFR002W HSE1P38753 452 aa3.97□□□□□ -1.77
NIC96YFR002W QNS1P38795 714 aaKnown RBP3.97□□□□□ -1.77
NIC96YFR002W TAF13P11747 167 aa3.97□□□□□ -1.77
NIC96YFR002W SAM35P14693 329 aa3.97□□□□□ -1.77
NIC96YFR002W LRG1P35688 1017 aa3.97□□□□□ -1.77
NIC96YFR002W YJL045WP47052 634 aa3.97□□□□□ -1.77
NIC96YFR002W SSY1Q03770 852 aa3.97□□□□□ -1.77
NIC96YFR002W HSP78P33416 811 aa3.96□□□□□ -1.77
NIC96YFR002W ATG14P38270 344 aa3.96□□□□□ -1.77
NIC96YFR002W HXT13P39924 564 aa3.96□□□□□ -1.77
NIC96YFR002W HXT17P53631 564 aa3.96□□□□□ -1.77
NIC96YFR002W HXT15P54854 567 aa3.96□□□□□ -1.77
NIC96YFR002W LPX1Q12405 387 aaKnown RBP3.96□□□□□ -1.77
NIC96YFR002W DED1P06634 604 aaKnown RBP3.96□□□□□ -1.78
NIC96YFR002W PRO1P32264 428 aa3.96□□□□□ -1.78
NIC96YFR002W ASF1P32447 279 aa3.96□□□□□ -1.78
NIC96YFR002W AVT1P47082 602 aa3.96□□□□□ -1.78
NIC96YFR002W ROD1Q02805 837 aa3.96□□□□□ -1.78
NIC96YFR002W HRK1Q08732 759 aaKnown RBP3.96□□□□□ -1.78
NIC96YFR002W ADP1P25371 1049 aa3.95□□□□□ -1.78
NIC96YFR002W VPS53P47061 822 aa3.95□□□□□ -1.78
NIC96YFR002W SIW14P53965 281 aa3.95□□□□□ -1.78
NIC96YFR002W ORC3P54790 616 aa3.95□□□□□ -1.78
NIC96YFR002W GCR1P07261 785 aa3.95□□□□□ -1.78
NIC96YFR002W POL12P38121 705 aaPredicted RBP3.95□□□□□ -1.78
NIC96YFR002W PTC7P38797 343 aa3.95□□□□□ -1.78
NIC96YFR002W RAT1Q02792 1006 aaKnown RBP3.95□□□□□ -1.78
NIC96YFR002W DFG16Q99234 619 aa3.95□□□□□ -1.78
NIC96YFR002W ALG3P38179 458 aa3.94□□□□□ -1.78
NIC96YFR002W OYE2Q03558 400 aaKnown RBP3.94□□□□□ -1.78
NIC96YFR002W MRL1Q06815 381 aa3.94□□□□□ -1.78
NIC96YFR002W MKK2P32491 506 aa3.94□□□□□ -1.78
NIC96YFR002W SEG2P34250 1132 aa3.94□□□□□ -1.78
NIC96YFR002W YHL012WP38709 493 aa3.94□□□□□ -1.78
NIC96YFR002W GTS1P40956 396 aa3.94□□□□□ -1.78
NIC96YFR002W ESF1Q06344 628 aaKnown RBP3.94□□□□□ -1.78
NIC96YFR002W PTC5Q12511 572 aa3.94□□□□□ -1.78
NIC96YFR002W KIP1P28742 1111 aa3.93□□□□□ -1.78
NIC96YFR002W ELM1P32801 640 aa3.93□□□□□ -1.78
NIC96YFR002W ENT3P47160 408 aa3.93□□□□□ -1.78
NIC96YFR002W YSC84P32793 468 aa3.93□□□□□ -1.78
NIC96YFR002W PEP7P32609 515 aa3.92□□□□□ -1.78
NIC96YFR002W GPB2P39717 880 aa3.92□□□□□ -1.78
NIC96YFR002W ECL1P48235 211 aa3.92□□□□□ -1.78
NIC96YFR002W MDL2P33311 773 aa3.92□□□□□ -1.78
NIC96YFR002W RMD1Q03441 430 aa3.92□□□□□ -1.78
NIC96YFR002W AOS1Q06624 347 aa3.92□□□□□ -1.78
NIC96YFR002W RCL1Q08096 367 aaPredicted RBP3.92□□□□□ -1.78
NIC96YFR002W SRO9P25567 434 aaKnown RBP3.91□□□□□ -1.78
NIC96YFR002W DUT1P33317 147 aa3.91□□□□□ -1.78
NIC96YFR002W SPA2P23201 1466 aaKnown RBP3.91□□□□□ -1.78
NIC96YFR002W RNQ1P25367 405 aa3.91□□□□□ -1.78
NIC96YFR002W IRC24P40580 263 aa3.91□□□□□ -1.78
NIC96YFR002W SWR1Q05471 1514 aa3.91□□□□□ -1.78
NIC96YFR002W TSA1P34760 196 aaKnown RBP3.9□□□□□ -1.78
NIC96YFR002W BAP2P38084 609 aa3.9□□□□□ -1.78
NIC96YFR002W YDL177CQ12257 170 aa3.9□□□□□ -1.78
NIC96YFR002W SYP1P25623 870 aaKnown RBP3.9□□□□□ -1.79
NIC96YFR002W RSC58Q07979 502 aa3.9□□□□□ -1.79
NIC96YFR002W RTT10Q08924 1013 aa3.9□□□□□ -1.79
NIC96YFR002W YPL260WQ08977 551 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms