RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C SBP1P10080 294 aaKnown RBP4.06□□□□□ -1.76
MSH4YFL003C HBS1P32769 611 aaKnown RBP4.06□□□□□ -1.76
MSH4YFL003C ACO2P39533 789 aa4.06□□□□□ -1.76
MSH4YFL003C IRR1P40541 1150 aa4.06□□□□□ -1.76
MSH4YFL003C BRE2P43132 505 aa4.06□□□□□ -1.76
MSH4YFL003C SCW11P53189 542 aa4.06□□□□□ -1.76
MSH4YFL003C ADE12P80210 433 aaKnown RBP4.06□□□□□ -1.76
MSH4YFL003C NAR1P23503 491 aaKnown RBP4.05□□□□□ -1.76
MSH4YFL003C MNN1P39106 762 aa4.05□□□□□ -1.76
MSH4YFL003C AOS1Q06624 347 aa4.05□□□□□ -1.76
MSH4YFL003C YDL176WQ12027 708 aa4.05□□□□□ -1.76
MSH4YFL003C DBP2P24783 546 aaKnown RBP4.05□□□□□ -1.76
MSH4YFL003C SBA1P28707 216 aaKnown RBP4.05□□□□□ -1.76
MSH4YFL003C YGR125WP53273 1036 aa4.05□□□□□ -1.76
MSH4YFL003C DNM1P54861 757 aa4.05□□□□□ -1.76
MSH4YFL003C SPO71Q03868 1245 aa4.05□□□□□ -1.76
MSH4YFL003C UBX5Q06682 500 aa4.05□□□□□ -1.76
MSH4YFL003C INO1P11986 533 aa4.04□□□□□ -1.76
MSH4YFL003C CHZ1P40019 153 aaPredicted RBP4.04□□□□□ -1.76
MSH4YFL003C FET4P40988 552 aa4.04□□□□□ -1.76
MSH4YFL003C ENT3P47160 408 aa4.04□□□□□ -1.76
MSH4YFL003C UTP8P53276 713 aaKnown RBP4.04□□□□□ -1.76
MSH4YFL003C EST2Q06163 884 aa4.04□□□□□ -1.76
MSH4YFL003C MET6P05694 767 aaKnown RBP4.04□□□□□ -1.76
MSH4YFL003C DED1P06634 604 aaKnown RBP4.04□□□□□ -1.76
MSH4YFL003C PHO8P11491 566 aa4.04□□□□□ -1.76
MSH4YFL003C TOP3P13099 656 aa4.04□□□□□ -1.76
MSH4YFL003C ERS1P17261 260 aa4.04□□□□□ -1.76
MSH4YFL003C FPS1P23900 669 aa4.04□□□□□ -1.76
MSH4YFL003C AFR1P33304 620 aa4.04□□□□□ -1.76
MSH4YFL003C SPO74P45819 413 aa4.04□□□□□ -1.76
MSH4YFL003C UTP22P53254 1237 aaPredicted RBP4.04□□□□□ -1.76
MSH4YFL003C RSC2Q06488 889 aa4.04□□□□□ -1.76
MSH4YFL003C SYP1P25623 870 aaKnown RBP4.03□□□□□ -1.76
MSH4YFL003C ADD66P36040 267 aa4.03□□□□□ -1.76
MSH4YFL003C YGL176CP46945 554 aa4.03□□□□□ -1.76
MSH4YFL003C GUP1P53154 560 aa4.03□□□□□ -1.76
MSH4YFL003C CIT1P00890 479 aa4.03□□□□□ -1.76
MSH4YFL003C PAN5P38787 379 aa4.03□□□□□ -1.76
MSH4YFL003C ZDS1P50111 915 aaKnown RBP4.03□□□□□ -1.76
MSH4YFL003C SOK2P53438 785 aaPredicted RBP4.03□□□□□ -1.76
MSH4YFL003C YMR265CQ03508 461 aaKnown RBP4.03□□□□□ -1.76
MSH4YFL003C BUL2Q03758 920 aaKnown RBP4.03□□□□□ -1.76
MSH4YFL003C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
MSH4YFL003C DBP5P20449 482 aaKnown RBP4.02□□□□□ -1.77
MSH4YFL003C GIS4Q04233 774 aa4.02□□□□□ -1.77
MSH4YFL003C PDC5P16467 563 aaKnown RBP4.02□□□□□ -1.77
MSH4YFL003C UBP12P39538 1254 aa4.02□□□□□ -1.77
MSH4YFL003C GIP2P40036 548 aa4.02□□□□□ -1.77
MSH4YFL003C OSW7P43611 510 aa4.02□□□□□ -1.77
MSH4YFL003C EAF1Q06337 982 aa4.02□□□□□ -1.77
MSH4YFL003C YOR131CQ12486 218 aa4.02□□□□□ -1.77
MSH4YFL003C ALG3P38179 458 aa4.01□□□□□ -1.77
MSH4YFL003C CNN1P43618 361 aa4.01□□□□□ -1.77
MSH4YFL003C MEC3Q02574 474 aa4.01□□□□□ -1.77
MSH4YFL003C YDR444WQ04093 687 aa4.01□□□□□ -1.77
MSH4YFL003C HBN1Q96VH4 193 aa4.01□□□□□ -1.77
MSH4YFL003C TY4B-PA0A0B7P3V8 1104 aa4.01□□□□□ -1.77
MSH4YFL003C GPM1P00950 247 aaKnown RBP4.01□□□□□ -1.77
MSH4YFL003C RPL8AP17076 256 aaKnown RBP4.01□□□□□ -1.77
MSH4YFL003C PBY1P38254 753 aa4.01□□□□□ -1.77
MSH4YFL003C FPR3P38911 411 aaKnown RBP4.01□□□□□ -1.77
MSH4YFL003C TED1P40533 473 aa4.01□□□□□ -1.77
MSH4YFL003C YLR346CQ06139 101 aa4.01□□□□□ -1.77
MSH4YFL003C ALG6Q12001 544 aaKnown RBP4.01□□□□□ -1.77
MSH4YFL003C TY4A-HQ6Q5P6 413 aa4.01□□□□□ -1.77
MSH4YFL003C HSP60P19882 572 aaKnown RBP4□□□□□ -1.77
MSH4YFL003C TSR4P25040 408 aa4□□□□□ -1.77
MSH4YFL003C MLS1P30952 554 aa4□□□□□ -1.77
MSH4YFL003C MRP8P35719 219 aa4□□□□□ -1.77
MSH4YFL003C YKL151CP36059 337 aa4□□□□□ -1.77
MSH4YFL003C YKL077WP36081 392 aa4□□□□□ -1.77
MSH4YFL003C NEO1P40527 1151 aa4□□□□□ -1.77
MSH4YFL003C YFL054CP43549 646 aa4□□□□□ -1.77
MSH4YFL003C TY4A-JP47023 414 aa4□□□□□ -1.77
MSH4YFL003C NPL3Q01560 414 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
MSH4YFL003C NTG2Q08214 380 aa4□□□□□ -1.77
MSH4YFL003C SPA2P23201 1466 aaKnown RBP4□□□□□ -1.77
MSH4YFL003C MEF1P25039 761 aa4□□□□□ -1.77
MSH4YFL003C MSH2P25847 964 aa4□□□□□ -1.77
MSH4YFL003C RAD27P26793 382 aa4□□□□□ -1.77
MSH4YFL003C RKM2Q03942 479 aa4□□□□□ -1.77
MSH4YFL003C YLR125WQ12138 136 aa4□□□□□ -1.77
MSH4YFL003C YER152CP10356 443 aa3.99□□□□□ -1.77
MSH4YFL003C KNS1P32350 737 aaPredicted RBP3.99□□□□□ -1.77
MSH4YFL003C ERT1P38140 529 aa3.99□□□□□ -1.77
MSH4YFL003C YNR029CP53729 429 aaKnown RBP3.99□□□□□ -1.77
MSH4YFL003C SPO75Q07798 868 aa3.99□□□□□ -1.77
MSH4YFL003C RKM4Q12504 494 aa3.99□□□□□ -1.77
MSH4YFL003C NOP14Q99207 810 aaKnown RBP3.99□□□□□ -1.77
MSH4YFL003C RPP1AP05318 106 aaPredicted RBP3.99□□□□□ -1.77
MSH4YFL003C ARL1P38116 183 aaKnown RBP3.99□□□□□ -1.77
MSH4YFL003C SHU2P38957 223 aa3.99□□□□□ -1.77
MSH4YFL003C ALR2P43553 858 aa3.99□□□□□ -1.77
MSH4YFL003C GCV1P48015 400 aa3.99□□□□□ -1.77
MSH4YFL003C ERP6P53198 216 aa3.99□□□□□ -1.77
MSH4YFL003C YGR045CP53229 120 aa3.99□□□□□ -1.77
MSH4YFL003C SPO20Q04359 397 aa3.99□□□□□ -1.77
MSH4YFL003C THI4P32318 326 aa3.98□□□□□ -1.77
MSH4YFL003C PGM2P37012 569 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms