RNA–Protein interactions for RNA: YEL040W

UTR2, Transcript of Chitin transglycosylase, yeast

Gene UTR2, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTR2	YEL040W	IOC3	P43596	787 aa		7.21	□□□□□ -1.25
UTR2	YEL040W	OSW7	P43611	510 aa		7.21	□□□□□ -1.25
UTR2	YEL040W	YCG1	Q06680	1035 aa		7.21	□□□□□ -1.25
UTR2	YEL040W	THI3	Q07471	609 aa		7.21	□□□□□ -1.25
UTR2	YEL040W	GET3	Q12154	354 aa	Known RBP	7.21	□□□□□ -1.25
UTR2	YEL040W	PHO13	P19881	312 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	VPS1	P21576	704 aa	Known RBP	7.2	□□□□□ -1.26
UTR2	YEL040W	MRC1	P25588	1096 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	PXL1	P36166	706 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	PCH2	P38126	564 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	RRP8	P38961	392 aa	Known RBP	7.2	□□□□□ -1.26
UTR2	YEL040W	KTR7	P40504	517 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	YIR042C	P40586	236 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	NAF1	P53919	492 aa	Known RBP	7.2	□□□□□ -1.26
UTR2	YEL040W	HDA1	P53973	706 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	UFD2	P54860	961 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	INM2	Q05533	292 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	TFC6	Q06339	672 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	MCM16	Q12262	181 aa		7.2	□□□□□ -1.26
UTR2	YEL040W	CYB2	P00175	591 aa		7.19	□□□□□ -1.26
UTR2	YEL040W	PET123	P17558	318 aa		7.19	□□□□□ -1.26
UTR2	YEL040W	PTK2	P47116	818 aa	Known RBP	7.19	□□□□□ -1.26
UTR2	YEL040W	PRP31	P49704	494 aa	Predicted RBP	7.19	□□□□□ -1.26
UTR2	YEL040W	RPS15	Q01855	142 aa	Known RBP	7.19	□□□□□ -1.26
UTR2	YEL040W	GFD1	Q04839	188 aa	Known RBP	7.19	□□□□□ -1.26
UTR2	YEL040W	MYO1	P08964	1928 aa		7.19	□□□□□ -1.26
UTR2	YEL040W	PDC1	P06169	563 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	STE11	P23561	717 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	MCM3	P24279	971 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	BMH1	P29311	267 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	MGM1	P32266	881 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	ASF1	P32447	279 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	ADE17	P38009	592 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	NUG1	P40010	520 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	MSH4	P40965	878 aa	Predicted RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	RAT1	Q02792	1006 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	DPL1	Q05567	589 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	HCR1	Q05775	265 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	WSC3	Q12215	556 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	PRP40	P33203	583 aa	Known RBP	7.18	□□□□□ -1.26
UTR2	YEL040W	ALD2	P47771	506 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	AFT2	Q08957	416 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	DPH6	Q12429	685 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	PTC5	Q12511	572 aa		7.18	□□□□□ -1.26
UTR2	YEL040W	FLO1	P32768	1537 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	UBC1	P21734	215 aa	Known RBP	7.17	□□□□□ -1.26
UTR2	YEL040W	SAC6	P32599	642 aa	Known RBP	7.17	□□□□□ -1.26
UTR2	YEL040W	ANP1	P32629	500 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	MYO3	P36006	1272 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	RXT2	P38255	430 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	RTT107	P38850	1070 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	ICP55	P40051	511 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	RAD26	P40352	1085 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	PUS6	P53294	404 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	GDE1	Q02979	1223 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	YBL113C	Q7M4S9	792 aa		7.17	□□□□□ -1.26
UTR2	YEL040W	KEX2	P13134	814 aa		7.16	□□□□□ -1.26
UTR2	YEL040W	YHL050C	P38721	697 aa		7.16	□□□□□ -1.26
UTR2	YEL040W	MID1	P41821	548 aa		7.16	□□□□□ -1.26
UTR2	YEL040W	APT1	P49435	187 aa	Known RBP	7.16	□□□□□ -1.26
UTR2	YEL040W	CAF130	P53280	1122 aa	Predicted RBP	7.16	□□□□□ -1.26
UTR2	YEL040W	ALF1	P53904	254 aa		7.16	□□□□□ -1.26
UTR2	YEL040W	MMR1	Q06324	491 aa		7.16	□□□□□ -1.26
UTR2	YEL040W	ERF2	Q06551	359 aa		7.16	□□□□□ -1.26
UTR2	YEL040W	MPC54	Q08550	464 aa		7.16	□□□□□ -1.26
UTR2	YEL040W	NOP14	Q99207	810 aa	Known RBP	7.16	□□□□□ -1.26
UTR2	YEL040W	RNR3	P21672	869 aa	Known RBP	7.15	□□□□□ -1.27
UTR2	YEL040W	MSH3	P25336	1018 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	RRP43	P25359	394 aa	Predicted RBP	7.15	□□□□□ -1.27
UTR2	YEL040W	ISF1	P32488	338 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	RPT3	P33298	428 aa	Known RBP	7.15	□□□□□ -1.27
UTR2	YEL040W	EAP1	P36041	632 aa	Known RBP	7.15	□□□□□ -1.27
UTR2	YEL040W	SAP190	P36123	1033 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	BOI1	P38041	980 aa	Known RBP	7.15	□□□□□ -1.27
UTR2	YEL040W	MAL31	P38156	614 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	SPL2	P38839	148 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	CCC2	P38995	1004 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	CAJ1	P39101	391 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	CSM2	P40465	213 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	PCI8	P40512	444 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	RPN11	P43588	306 aa	Known RBP	7.15	□□□□□ -1.27
UTR2	YEL040W	YGR130C	P53278	816 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	VPS38	Q05919	439 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	UTP13	Q05946	817 aa	Known RBP	7.15	□□□□□ -1.27
UTR2	YEL040W	YOR111W	Q99210	232 aa		7.15	□□□□□ -1.27
UTR2	YEL040W	GAL2	P13181	574 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	SEC65	P29478	273 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	STO1	P34160	861 aa	Known RBP	7.14	□□□□□ -1.27
UTR2	YEL040W	YET1	P35723	206 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	SHM1	P37292	490 aa	Predicted RBP	7.14	□□□□□ -1.27
UTR2	YEL040W	UBX7	P38349	436 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	SEC9	P40357	651 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	SMC3	P47037	1230 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	DIB1	Q06819	143 aa	Predicted RBP	7.14	□□□□□ -1.27
UTR2	YEL040W	NBL1	Q3E7Y6	73 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	YKL068W-A	Q3E826	78 aa		7.14	□□□□□ -1.27
UTR2	YEL040W	HIS4	P00815	799 aa	Known RBP	7.13	□□□□□ -1.27
UTR2	YEL040W	SEC23	P15303	768 aa	Known RBP	7.13	□□□□□ -1.27
UTR2	YEL040W	ALG1	P16661	449 aa		7.13	□□□□□ -1.27
UTR2	YEL040W	MAK31	P23059	88 aa		7.13	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms