RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C SAC7P17121 654 aa6.3□□□□□ -1.4
RPB7YDR404C MNR2P35724 969 aa6.3□□□□□ -1.4
RPB7YDR404C ECM2P38241 364 aaKnown RBP6.3□□□□□ -1.4
RPB7YDR404C AMN1P38285 549 aaPredicted RBP6.3□□□□□ -1.4
RPB7YDR404C LEM3P42838 414 aa6.3□□□□□ -1.4
RPB7YDR404C GUP1P53154 560 aa6.3□□□□□ -1.4
RPB7YDR404C TY4B-PA0A0B7P3V8 1104 aa6.29□□□□□ -1.4
RPB7YDR404C SFA1P32771 386 aa6.29□□□□□ -1.4
RPB7YDR404C PRP40P33203 583 aaKnown RBP6.29□□□□□ -1.4
RPB7YDR404C MRPS18P42847 217 aa6.29□□□□□ -1.4
RPB7YDR404C BIO5P53744 561 aaKnown RBP6.29□□□□□ -1.4
RPB7YDR404C DSE4P53753 1117 aa6.29□□□□□ -1.4
RPB7YDR404C CTR9P89105 1077 aa6.29□□□□□ -1.4
RPB7YDR404C TY4A-HQ6Q5P6 413 aa6.29□□□□□ -1.4
RPB7YDR404C DNF3Q12674 1656 aa6.29□□□□□ -1.4
RPB7YDR404C NEO1P40527 1151 aa6.28□□□□□ -1.4
RPB7YDR404C CWC24P53769 259 aa6.28□□□□□ -1.4
RPB7YDR404C YPL034WQ03083 165 aa6.28□□□□□ -1.4
RPB7YDR404C SOG2Q08817 791 aa6.28□□□□□ -1.4
RPB7YDR404C SNQ2P32568 1501 aaKnown RBP6.28□□□□□ -1.4
RPB7YDR404C STU1P38198 1513 aa6.28□□□□□ -1.4
RPB7YDR404C PDR15Q04182 1529 aaKnown RBP6.27□□□□□ -1.41
RPB7YDR404C PRE9P23638 258 aaKnown RBP6.27□□□□□ -1.41
RPB7YDR404C RSC6P25632 483 aa6.27□□□□□ -1.41
RPB7YDR404C PAN5P38787 379 aa6.27□□□□□ -1.41
RPB7YDR404C WRS1Q12109 432 aaKnown RBP6.27□□□□□ -1.41
RPB7YDR404C SSF2Q12153 453 aaPredicted RBP6.27□□□□□ -1.41
RPB7YDR404C ARO1P08566 1588 aaKnown RBP6.27□□□□□ -1.41
RPB7YDR404C COBP00163 385 aa6.26□□□□□ -1.41
RPB7YDR404C MCM5P29496 775 aaKnown RBP6.26□□□□□ -1.41
RPB7YDR404C PYC2P32327 1180 aaKnown RBP6.26□□□□□ -1.41
RPB7YDR404C UGA4P32837 571 aa6.26□□□□□ -1.41
RPB7YDR404C TFA2P36145 328 aa6.26□□□□□ -1.41
RPB7YDR404C ARI1P53111 347 aaKnown RBP6.26□□□□□ -1.41
RPB7YDR404C SPO71Q03868 1245 aa6.26□□□□□ -1.41
RPB7YDR404C MCD1Q12158 566 aa6.26□□□□□ -1.41
RPB7YDR404C MYO4P32492 1471 aa6.26□□□□□ -1.41
RPB7YDR404C PDR10P51533 1564 aa6.26□□□□□ -1.41
RPB7YDR404C KAR2P16474 682 aaKnown RBP6.25□□□□□ -1.41
RPB7YDR404C COQ2P32378 372 aa6.25□□□□□ -1.41
RPB7YDR404C BRN1P38170 754 aa6.25□□□□□ -1.41
RPB7YDR404C IOC3P43596 787 aa6.25□□□□□ -1.41
RPB7YDR404C YJR124CP47159 448 aa6.25□□□□□ -1.41
RPB7YDR404C MON1P53129 644 aa6.25□□□□□ -1.41
RPB7YDR404C YPL109CQ02981 657 aa6.25□□□□□ -1.41
RPB7YDR404C SRP40P32583 406 aaPredicted RBP6.24□□□□□ -1.41
RPB7YDR404C DUR3P33413 735 aa6.24□□□□□ -1.41
RPB7YDR404C FET4P40988 552 aa6.24□□□□□ -1.41
RPB7YDR404C NUT1P53114 1132 aa6.24□□□□□ -1.41
RPB7YDR404C ULP1Q02724 621 aa6.24□□□□□ -1.41
RPB7YDR404C IOC4Q04213 475 aa6.24□□□□□ -1.41
RPB7YDR404C TRM3Q07527 1436 aa6.24□□□□□ -1.41
RPB7YDR404C MAE1P36013 669 aaKnown RBP6.23□□□□□ -1.41
RPB7YDR404C NMD2P38798 1089 aaKnown RBP6.23□□□□□ -1.41
RPB7YDR404C ADI1Q03677 179 aa6.23□□□□□ -1.41
RPB7YDR404C MSH6Q03834 1242 aa6.23□□□□□ -1.41
RPB7YDR404C TY1A-NL1Q12391 440 aaKnown RBP6.23□□□□□ -1.41
RPB7YDR404C USO1P25386 1790 aa6.23□□□□□ -1.41
RPB7YDR404C IQG1Q12280 1495 aa6.22□□□□□ -1.41
RPB7YDR404C CDC34P14682 295 aa6.22□□□□□ -1.41
RPB7YDR404C PIC2P40035 300 aa6.22□□□□□ -1.41
RPB7YDR404C YJL049WP47048 450 aa6.22□□□□□ -1.41
RPB7YDR404C FAA4P47912 694 aaKnown RBP6.22□□□□□ -1.41
RPB7YDR404C RNH70P53331 553 aa6.22□□□□□ -1.41
RPB7YDR404C YNR065CP53751 1116 aa6.22□□□□□ -1.41
RPB7YDR404C GDE1Q02979 1223 aa6.22□□□□□ -1.41
RPB7YDR404C GLO4Q12320 285 aa6.22□□□□□ -1.41
RPB7YDR404C PDR12Q02785 1511 aa6.21□□□□□ -1.42
RPB7YDR404C GDB1Q06625 1536 aa6.21□□□□□ -1.42
RPB7YDR404C CHC1P22137 1653 aaKnown RBP6.21□□□□□ -1.42
RPB7YDR404C YKL091CP33324 310 aaKnown RBP6.21□□□□□ -1.42
RPB7YDR404C SPC42P36094 363 aa6.21□□□□□ -1.42
RPB7YDR404C POL5P39985 1022 aaKnown RBP6.21□□□□□ -1.42
RPB7YDR404C YAF9P53930 226 aa6.21□□□□□ -1.42
RPB7YDR404C DOS2P54858 310 aa6.21□□□□□ -1.42
RPB7YDR404C NSE3Q05541 303 aa6.21□□□□□ -1.42
RPB7YDR404C ELG1Q12050 791 aa6.21□□□□□ -1.42
RPB7YDR404C DUT1P33317 147 aa6.2□□□□□ -1.42
RPB7YDR404C RVS167P39743 482 aaKnown RBP6.2□□□□□ -1.42
RPB7YDR404C HAS1Q03532 505 aaKnown RBP6.2□□□□□ -1.42
RPB7YDR404C MAC1P35192 417 aa6.19□□□□□ -1.42
RPB7YDR404C AKR1P39010 764 aa6.19□□□□□ -1.42
RPB7YDR404C FAR11P53917 953 aa6.19□□□□□ -1.42
RPB7YDR404C YMR074CQ04773 145 aa6.19□□□□□ -1.42
RPB7YDR404C GCR1P07261 785 aa6.18□□□□□ -1.42
RPB7YDR404C CIT2P08679 460 aa6.18□□□□□ -1.42
RPB7YDR404C STI1P15705 589 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
RPB7YDR404C PRI2P20457 528 aa6.18□□□□□ -1.42
RPB7YDR404C GRX1P25373 110 aaKnown RBP6.18□□□□□ -1.42
RPB7YDR404C KAE1P36132 386 aa6.18□□□□□ -1.42
RPB7YDR404C SAP155P43612 1002 aa6.18□□□□□ -1.42
RPB7YDR404C YGR053CP53234 283 aa6.18□□□□□ -1.42
RPB7YDR404C PMT7Q06644 662 aa6.18□□□□□ -1.42
RPB7YDR404C HVG1P0CE11 249 aa6.17□□□□□ -1.42
RPB7YDR404C PGM1P33401 570 aaKnown RBP6.17□□□□□ -1.42
RPB7YDR404C TAT2P38967 592 aa6.17□□□□□ -1.42
RPB7YDR404C NRD1P53617 575 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42 RIP-Chip
RPB7YDR404C OPI10Q08202 246 aa6.17□□□□□ -1.42
RPB7YDR404C RTT10Q08924 1013 aa6.17□□□□□ -1.42
RPB7YDR404C CDC53Q12018 815 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms