RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	SAC7	P17121	654 aa		6.3	□□□□□ -1.4
RPB7	YDR404C	MNR2	P35724	969 aa		6.3	□□□□□ -1.4
RPB7	YDR404C	ECM2	P38241	364 aa	Known RBP	6.3	□□□□□ -1.4
RPB7	YDR404C	AMN1	P38285	549 aa	Predicted RBP	6.3	□□□□□ -1.4
RPB7	YDR404C	LEM3	P42838	414 aa		6.3	□□□□□ -1.4
RPB7	YDR404C	GUP1	P53154	560 aa		6.3	□□□□□ -1.4
RPB7	YDR404C	TY4B-P	A0A0B7P3V8	1104 aa		6.29	□□□□□ -1.4
RPB7	YDR404C	SFA1	P32771	386 aa		6.29	□□□□□ -1.4
RPB7	YDR404C	PRP40	P33203	583 aa	Known RBP	6.29	□□□□□ -1.4
RPB7	YDR404C	MRPS18	P42847	217 aa		6.29	□□□□□ -1.4
RPB7	YDR404C	BIO5	P53744	561 aa	Known RBP	6.29	□□□□□ -1.4
RPB7	YDR404C	DSE4	P53753	1117 aa		6.29	□□□□□ -1.4
RPB7	YDR404C	CTR9	P89105	1077 aa		6.29	□□□□□ -1.4
RPB7	YDR404C	TY4A-H	Q6Q5P6	413 aa		6.29	□□□□□ -1.4
RPB7	YDR404C	DNF3	Q12674	1656 aa		6.29	□□□□□ -1.4
RPB7	YDR404C	NEO1	P40527	1151 aa		6.28	□□□□□ -1.4
RPB7	YDR404C	CWC24	P53769	259 aa		6.28	□□□□□ -1.4
RPB7	YDR404C	YPL034W	Q03083	165 aa		6.28	□□□□□ -1.4
RPB7	YDR404C	SOG2	Q08817	791 aa		6.28	□□□□□ -1.4
RPB7	YDR404C	SNQ2	P32568	1501 aa	Known RBP	6.28	□□□□□ -1.4
RPB7	YDR404C	STU1	P38198	1513 aa		6.28	□□□□□ -1.4
RPB7	YDR404C	PDR15	Q04182	1529 aa	Known RBP	6.27	□□□□□ -1.41
RPB7	YDR404C	PRE9	P23638	258 aa	Known RBP	6.27	□□□□□ -1.41
RPB7	YDR404C	RSC6	P25632	483 aa		6.27	□□□□□ -1.41
RPB7	YDR404C	PAN5	P38787	379 aa		6.27	□□□□□ -1.41
RPB7	YDR404C	WRS1	Q12109	432 aa	Known RBP	6.27	□□□□□ -1.41
RPB7	YDR404C	SSF2	Q12153	453 aa	Predicted RBP	6.27	□□□□□ -1.41
RPB7	YDR404C	ARO1	P08566	1588 aa	Known RBP	6.27	□□□□□ -1.41
RPB7	YDR404C	COB	P00163	385 aa		6.26	□□□□□ -1.41
RPB7	YDR404C	MCM5	P29496	775 aa	Known RBP	6.26	□□□□□ -1.41
RPB7	YDR404C	PYC2	P32327	1180 aa	Known RBP	6.26	□□□□□ -1.41
RPB7	YDR404C	UGA4	P32837	571 aa		6.26	□□□□□ -1.41
RPB7	YDR404C	TFA2	P36145	328 aa		6.26	□□□□□ -1.41
RPB7	YDR404C	ARI1	P53111	347 aa	Known RBP	6.26	□□□□□ -1.41
RPB7	YDR404C	SPO71	Q03868	1245 aa		6.26	□□□□□ -1.41
RPB7	YDR404C	MCD1	Q12158	566 aa		6.26	□□□□□ -1.41
RPB7	YDR404C	MYO4	P32492	1471 aa		6.26	□□□□□ -1.41
RPB7	YDR404C	PDR10	P51533	1564 aa		6.26	□□□□□ -1.41
RPB7	YDR404C	KAR2	P16474	682 aa	Known RBP	6.25	□□□□□ -1.41
RPB7	YDR404C	COQ2	P32378	372 aa		6.25	□□□□□ -1.41
RPB7	YDR404C	BRN1	P38170	754 aa		6.25	□□□□□ -1.41
RPB7	YDR404C	IOC3	P43596	787 aa		6.25	□□□□□ -1.41
RPB7	YDR404C	YJR124C	P47159	448 aa		6.25	□□□□□ -1.41
RPB7	YDR404C	MON1	P53129	644 aa		6.25	□□□□□ -1.41
RPB7	YDR404C	YPL109C	Q02981	657 aa		6.25	□□□□□ -1.41
RPB7	YDR404C	SRP40	P32583	406 aa	Predicted RBP	6.24	□□□□□ -1.41
RPB7	YDR404C	DUR3	P33413	735 aa		6.24	□□□□□ -1.41
RPB7	YDR404C	FET4	P40988	552 aa		6.24	□□□□□ -1.41
RPB7	YDR404C	NUT1	P53114	1132 aa		6.24	□□□□□ -1.41
RPB7	YDR404C	ULP1	Q02724	621 aa		6.24	□□□□□ -1.41
RPB7	YDR404C	IOC4	Q04213	475 aa		6.24	□□□□□ -1.41
RPB7	YDR404C	TRM3	Q07527	1436 aa		6.24	□□□□□ -1.41
RPB7	YDR404C	MAE1	P36013	669 aa	Known RBP	6.23	□□□□□ -1.41
RPB7	YDR404C	NMD2	P38798	1089 aa	Known RBP	6.23	□□□□□ -1.41
RPB7	YDR404C	ADI1	Q03677	179 aa		6.23	□□□□□ -1.41
RPB7	YDR404C	MSH6	Q03834	1242 aa		6.23	□□□□□ -1.41
RPB7	YDR404C	TY1A-NL1	Q12391	440 aa	Known RBP	6.23	□□□□□ -1.41
RPB7	YDR404C	USO1	P25386	1790 aa		6.23	□□□□□ -1.41
RPB7	YDR404C	IQG1	Q12280	1495 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	CDC34	P14682	295 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	PIC2	P40035	300 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	YJL049W	P47048	450 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	FAA4	P47912	694 aa	Known RBP	6.22	□□□□□ -1.41
RPB7	YDR404C	RNH70	P53331	553 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	YNR065C	P53751	1116 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	GDE1	Q02979	1223 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	GLO4	Q12320	285 aa		6.22	□□□□□ -1.41
RPB7	YDR404C	PDR12	Q02785	1511 aa		6.21	□□□□□ -1.42
RPB7	YDR404C	GDB1	Q06625	1536 aa		6.21	□□□□□ -1.42
RPB7	YDR404C	CHC1	P22137	1653 aa	Known RBP	6.21	□□□□□ -1.42
RPB7	YDR404C	YKL091C	P33324	310 aa	Known RBP	6.21	□□□□□ -1.42
RPB7	YDR404C	SPC42	P36094	363 aa		6.21	□□□□□ -1.42
RPB7	YDR404C	POL5	P39985	1022 aa	Known RBP	6.21	□□□□□ -1.42
RPB7	YDR404C	YAF9	P53930	226 aa		6.21	□□□□□ -1.42
RPB7	YDR404C	DOS2	P54858	310 aa		6.21	□□□□□ -1.42
RPB7	YDR404C	NSE3	Q05541	303 aa		6.21	□□□□□ -1.42
RPB7	YDR404C	ELG1	Q12050	791 aa		6.21	□□□□□ -1.42
RPB7	YDR404C	DUT1	P33317	147 aa		6.2	□□□□□ -1.42
RPB7	YDR404C	RVS167	P39743	482 aa	Known RBP	6.2	□□□□□ -1.42
RPB7	YDR404C	HAS1	Q03532	505 aa	Known RBP	6.2	□□□□□ -1.42
RPB7	YDR404C	MAC1	P35192	417 aa		6.19	□□□□□ -1.42
RPB7	YDR404C	AKR1	P39010	764 aa		6.19	□□□□□ -1.42
RPB7	YDR404C	FAR11	P53917	953 aa		6.19	□□□□□ -1.42
RPB7	YDR404C	YMR074C	Q04773	145 aa		6.19	□□□□□ -1.42
RPB7	YDR404C	GCR1	P07261	785 aa		6.18	□□□□□ -1.42
RPB7	YDR404C	CIT2	P08679	460 aa		6.18	□□□□□ -1.42
RPB7	YDR404C	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.18	□□□□□ -1.42	not detected
RPB7	YDR404C	PRI2	P20457	528 aa		6.18	□□□□□ -1.42
RPB7	YDR404C	GRX1	P25373	110 aa	Known RBP	6.18	□□□□□ -1.42
RPB7	YDR404C	KAE1	P36132	386 aa		6.18	□□□□□ -1.42
RPB7	YDR404C	SAP155	P43612	1002 aa		6.18	□□□□□ -1.42
RPB7	YDR404C	YGR053C	P53234	283 aa		6.18	□□□□□ -1.42
RPB7	YDR404C	PMT7	Q06644	662 aa		6.18	□□□□□ -1.42
RPB7	YDR404C	HVG1	P0CE11	249 aa		6.17	□□□□□ -1.42
RPB7	YDR404C	PGM1	P33401	570 aa	Known RBP	6.17	□□□□□ -1.42
RPB7	YDR404C	TAT2	P38967	592 aa		6.17	□□□□□ -1.42
RPB7	YDR404C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.17	□□□□□ -1.42	RIP-Chip
RPB7	YDR404C	OPI10	Q08202	246 aa		6.17	□□□□□ -1.42
RPB7	YDR404C	RTT10	Q08924	1013 aa		6.17	□□□□□ -1.42
RPB7	YDR404C	CDC53	Q12018	815 aa	Known RBP	6.17	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 90 ms