RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C PAN5P38787 379 aa4.43□□□□□ -1.7
HDA2YDR295C PMC1P38929 1173 aaPredicted RBP4.43□□□□□ -1.7
HDA2YDR295C SHU2P38957 223 aa4.43□□□□□ -1.7
HDA2YDR295C TYW3P53177 273 aa4.43□□□□□ -1.7
HDA2YDR295C UTP22P53254 1237 aaPredicted RBP4.43□□□□□ -1.7
HDA2YDR295C RAT1Q02792 1006 aaKnown RBP4.43□□□□□ -1.7
HDA2YDR295C PPM2Q08282 695 aa4.43□□□□□ -1.7
HDA2YDR295C TSR4P25040 408 aa4.43□□□□□ -1.7
HDA2YDR295C LYP1P32487 611 aa4.43□□□□□ -1.7
HDA2YDR295C AFG2P32794 780 aa4.43□□□□□ -1.7
HDA2YDR295C RRP14P36080 434 aaKnown RBP4.43□□□□□ -1.7
HDA2YDR295C YKL077WP36081 392 aa4.43□□□□□ -1.7
HDA2YDR295C FPR3P38911 411 aaKnown RBP4.43□□□□□ -1.7
HDA2YDR295C TED1P40533 473 aa4.43□□□□□ -1.7
HDA2YDR295C NAN1Q02931 896 aaKnown RBP4.43□□□□□ -1.7
HDA2YDR295C YLR225CQ05948 407 aaKnown RBP4.43□□□□□ -1.7
HDA2YDR295C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
HDA2YDR295C RAD27P26793 382 aa4.42□□□□□ -1.7
HDA2YDR295C KNS1P32350 737 aaPredicted RBP4.42□□□□□ -1.7
HDA2YDR295C MOT2P34909 587 aaKnown RBP4.42□□□□□ -1.7
HDA2YDR295C GIP2P40036 548 aa4.42□□□□□ -1.7
HDA2YDR295C EST2Q06163 884 aa4.42□□□□□ -1.7
HDA2YDR295C YBR184WP38299 523 aa4.41□□□□□ -1.7
HDA2YDR295C POL5P39985 1022 aaKnown RBP4.41□□□□□ -1.7
HDA2YDR295C TPM2P40414 161 aa4.41□□□□□ -1.7
HDA2YDR295C TIM54P47045 478 aa4.41□□□□□ -1.7
HDA2YDR295C TIF35Q04067 274 aaKnown RBP4.41□□□□□ -1.7
HDA2YDR295C YPL066WQ12194 479 aa4.41□□□□□ -1.7
HDA2YDR295C AGP1P25376 633 aa4.41□□□□□ -1.7
HDA2YDR295C PGM2P37012 569 aaKnown RBP4.41□□□□□ -1.7
HDA2YDR295C JJJ3P47138 172 aa4.41□□□□□ -1.7
HDA2YDR295C ENT3P47160 408 aa4.41□□□□□ -1.7
HDA2YDR295C ERS1P17261 260 aa4.4□□□□□ -1.7
HDA2YDR295C TOA1P32773 286 aa4.4□□□□□ -1.7
HDA2YDR295C PPG1P32838 368 aa4.4□□□□□ -1.7
HDA2YDR295C VBA5P36172 582 aa4.4□□□□□ -1.7
HDA2YDR295C LEM3P42838 414 aa4.4□□□□□ -1.7
HDA2YDR295C SPO74P45819 413 aa4.4□□□□□ -1.7
HDA2YDR295C PFD1P46988 109 aa4.4□□□□□ -1.7
HDA2YDR295C ALG12P53730 551 aa4.4□□□□□ -1.7
HDA2YDR295C AOS1Q06624 347 aa4.4□□□□□ -1.7
HDA2YDR295C SSB1P11484 613 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C ADD66P36040 267 aa4.39□□□□□ -1.71
HDA2YDR295C SSB2P40150 613 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C RPS0BP46654 252 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C GCV1P48015 400 aa4.39□□□□□ -1.71
HDA2YDR295C KIP3P53086 805 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C MEC3Q02574 474 aa4.39□□□□□ -1.71
HDA2YDR295C SPO71Q03868 1245 aa4.39□□□□□ -1.71
HDA2YDR295C BRE1Q07457 700 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C INO1P11986 533 aa4.39□□□□□ -1.71
HDA2YDR295C PUF4P25339 888 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
HDA2YDR295C SYP1P25623 870 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C GAR1P28007 205 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C ALG14P38242 237 aa4.39□□□□□ -1.71
HDA2YDR295C TY4A-JP47023 414 aa4.39□□□□□ -1.71
HDA2YDR295C MTR4P47047 1073 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C SHE9Q04172 456 aa4.39□□□□□ -1.71
HDA2YDR295C ALG6Q12001 544 aaKnown RBP4.39□□□□□ -1.71
HDA2YDR295C GAL11P19659 1081 aa4.38□□□□□ -1.71
HDA2YDR295C SBA1P28707 216 aaKnown RBP4.38□□□□□ -1.71
HDA2YDR295C TIM23P32897 222 aa4.38□□□□□ -1.71
HDA2YDR295C REI1P38344 393 aaPredicted RBP4.38□□□□□ -1.71
HDA2YDR295C YNR063WP53749 607 aa4.38□□□□□ -1.71
HDA2YDR295C SPO20Q04359 397 aa4.38□□□□□ -1.71
HDA2YDR295C HPF1Q05164 967 aa4.38□□□□□ -1.71
HDA2YDR295C FLC1Q08967 793 aa4.38□□□□□ -1.71
HDA2YDR295C SLP1Q12232 587 aa4.38□□□□□ -1.71
HDA2YDR295C TY4B-PA0A0B7P3V8 1104 aa4.38□□□□□ -1.71
HDA2YDR295C DBP5P20449 482 aaKnown RBP4.38□□□□□ -1.71
HDA2YDR295C RPL8BP29453 256 aaKnown RBP4.38□□□□□ -1.71
HDA2YDR295C ARL1P38116 183 aaKnown RBP4.38□□□□□ -1.71
HDA2YDR295C MPH1P40562 993 aa4.38□□□□□ -1.71
HDA2YDR295C FMP25Q08023 583 aa4.38□□□□□ -1.71
HDA2YDR295C YOL057WQ08225 711 aa4.38□□□□□ -1.71
HDA2YDR295C ELG1Q12050 791 aa4.38□□□□□ -1.71
HDA2YDR295C YOR131CQ12486 218 aa4.38□□□□□ -1.71
HDA2YDR295C TY4A-HQ6Q5P6 413 aa4.38□□□□□ -1.71
HDA2YDR295C ALG3P38179 458 aa4.37□□□□□ -1.71
HDA2YDR295C RSP5P39940 809 aaKnown RBP4.37□□□□□ -1.71
HDA2YDR295C NOP2P40991 618 aaKnown RBP4.37□□□□□ -1.71
HDA2YDR295C CNN1P43618 361 aa4.37□□□□□ -1.71
HDA2YDR295C RKM2Q03942 479 aa4.37□□□□□ -1.71
HDA2YDR295C YDL121CQ07541 149 aa4.37□□□□□ -1.71
HDA2YDR295C GRX4P32642 244 aa4.36□□□□□ -1.71
HDA2YDR295C MBP1P39678 833 aa4.36□□□□□ -1.71
HDA2YDR295C NUP82P40368 713 aa4.36□□□□□ -1.71
HDA2YDR295C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71 RIP-Chip
HDA2YDR295C ERR1P0CX10 437 aa4.36□□□□□ -1.71
HDA2YDR295C ERR2P0CX11 437 aa4.36□□□□□ -1.71
HDA2YDR295C RPA135P22138 1203 aaKnown RBP4.36□□□□□ -1.71
HDA2YDR295C MRP8P35719 219 aa4.36□□□□□ -1.71
HDA2YDR295C IRR1P40541 1150 aa4.36□□□□□ -1.71
HDA2YDR295C AIM21P40563 679 aa4.36□□□□□ -1.71
HDA2YDR295C YGL176CP46945 554 aa4.36□□□□□ -1.71
HDA2YDR295C YGR045CP53229 120 aa4.36□□□□□ -1.71
HDA2YDR295C NCE103P53615 221 aa4.36□□□□□ -1.71
HDA2YDR295C SBP1P10080 294 aaKnown RBP4.35□□□□□ -1.71
HDA2YDR295C SAC7P17121 654 aa4.35□□□□□ -1.71
HDA2YDR295C MCM7P38132 845 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms