RNA–Protein interactions for RNA: YDR244W

PEX5, Transcript of Peroxisomal membrane signal receptor for peroxisomal matrix proteins, yeast

Gene PEX5, Length 1,839 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX5	YDR244W	UBX5	Q06682	500 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	TY1A-GR1	Q12085	440 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.07	□□□□□ -1.76
PEX5	YDR244W	TY1A-OL	Q92392	440 aa	Known RBP	4.07	□□□□□ -1.76
PEX5	YDR244W	HTS1	P07263	546 aa	Known RBP	4.07	□□□□□ -1.76
PEX5	YDR244W	INO1	P11986	533 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	MKK2	P32491	506 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	GRX4	P32642	244 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	MSC7	P38694	644 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	MTR4	P47047	1073 aa	Known RBP	4.07	□□□□□ -1.76
PEX5	YDR244W	YNR065C	P53751	1116 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	NAM8	Q00539	523 aa	Known RBP	4.07	□□□□□ -1.76
PEX5	YDR244W	TIF35	Q04067	274 aa	Known RBP	4.07	□□□□□ -1.76
PEX5	YDR244W	EST2	Q06163	884 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	OPT2	Q06593	877 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	SOG2	Q08817	791 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	RKM4	Q12504	494 aa		4.07	□□□□□ -1.76
PEX5	YDR244W	PRP9	P19736	530 aa	Known RBP	4.06	□□□□□ -1.76
PEX5	YDR244W	SYP1	P25623	870 aa	Known RBP	4.06	□□□□□ -1.76
PEX5	YDR244W	YKL107W	P34251	309 aa		4.06	□□□□□ -1.76
PEX5	YDR244W	NEO1	P40527	1151 aa		4.06	□□□□□ -1.76
PEX5	YDR244W	MRP10	O75012	95 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	DIT1	P21623	536 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	SRM1	P21827	482 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	GLY1	P37303	387 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	MCM7	P38132	845 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	ATG14	P38270	344 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	NEM1	P38757	446 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	SNF7	P39929	240 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	PRK1	P40494	810 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	ALR2	P43553	858 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	SCW11	P53189	542 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	UTP22	P53254	1237 aa	Predicted RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	UTP8	P53276	713 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	RTS3	P53289	263 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	RAT1	Q02792	1006 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	YMR265C	Q03508	461 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	TAF8	Q03750	510 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	UTP5	Q04177	643 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	AOS1	Q06624	347 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	DBP5	P20449	482 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	FPS1	P23900	669 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
PEX5	YDR244W	ADD66	P36040	267 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	CRP1	P38845	465 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	RTA1	P53047	317 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	YDL124W	Q07551	312 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	YIG1	Q08956	461 aa		4.05	□□□□□ -1.76
PEX5	YDR244W	NOP14	Q99207	810 aa	Known RBP	4.05	□□□□□ -1.76
PEX5	YDR244W	TOP1	P04786	769 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
PEX5	YDR244W	UBP12	P39538	1254 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	MBP1	P39678	833 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	SLS1	P42900	643 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	CNN1	P43618	361 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	YGL176C	P46945	554 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	ATG36	P46983	293 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	HAS1	Q03532	505 aa	Known RBP	4.04	□□□□□ -1.76
PEX5	YDR244W	NTG2	Q08214	380 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	YPL066W	Q12194	479 aa		4.04	□□□□□ -1.76
PEX5	YDR244W	MSH2	P25847	964 aa		4.03	□□□□□ -1.76
PEX5	YDR244W	YEN1	P40028	759 aa		4.03	□□□□□ -1.76
PEX5	YDR244W	GUP1	P53154	560 aa		4.03	□□□□□ -1.76
PEX5	YDR244W	TY1A-DR2	Q03964	440 aa	Known RBP	4.03	□□□□□ -1.76
PEX5	YDR244W	TY1A-BL	Q12266	440 aa		4.03	□□□□□ -1.76
PEX5	YDR244W	ADR1	P07248	1323 aa		4.03	□□□□□ -1.76
PEX5	YDR244W	BET3	P36149	193 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	CCC2	P38995	1004 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	BRE2	P43132	505 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	HNT2	P49775	206 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	CUZ1	P53899	274 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	DNM1	P54861	757 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	RKM2	Q03942	479 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	SFP1	P32432	683 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	ARL1	P38116	183 aa	Known RBP	4.02	□□□□□ -1.77
PEX5	YDR244W	LEM3	P42838	414 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	SOK2	P53438	785 aa	Predicted RBP	4.02	□□□□□ -1.77
PEX5	YDR244W	YNR063W	P53749	607 aa		4.02	□□□□□ -1.77
PEX5	YDR244W	ADE12	P80210	433 aa	Known RBP	4.02	□□□□□ -1.77
PEX5	YDR244W	AFG2	P32794	780 aa		4.01	□□□□□ -1.77
PEX5	YDR244W	ALG3	P38179	458 aa		4.01	□□□□□ -1.77
PEX5	YDR244W	ROG3	P43602	733 aa		4.01	□□□□□ -1.77
PEX5	YDR244W	GCV1	P48015	400 aa		4.01	□□□□□ -1.77
PEX5	YDR244W	HSV2	P50079	448 aa	Predicted RBP	4.01	□□□□□ -1.77
PEX5	YDR244W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
PEX5	YDR244W	GCR2	Q01722	534 aa		4.01	□□□□□ -1.77
PEX5	YDR244W	YDR461C-A	Q2V2P7	80 aa		4.01	□□□□□ -1.77
PEX5	YDR244W	RPL8A	P17076	256 aa	Known RBP	4	□□□□□ -1.77
PEX5	YDR244W	MLS1	P30952	554 aa		4	□□□□□ -1.77
PEX5	YDR244W	RGD1	P38339	666 aa		4	□□□□□ -1.77
PEX5	YDR244W	GEM1	P39722	662 aa		4	□□□□□ -1.77
PEX5	YDR244W	MPH1	P40562	993 aa		4	□□□□□ -1.77
PEX5	YDR244W	SPO74	P45819	413 aa		4	□□□□□ -1.77
PEX5	YDR244W	TPO2	P53283	614 aa		4	□□□□□ -1.77
PEX5	YDR244W	MEC3	Q02574	474 aa		4	□□□□□ -1.77
PEX5	YDR244W	UGO1	Q03327	502 aa		4	□□□□□ -1.77
PEX5	YDR244W	SPO71	Q03868	1245 aa		4	□□□□□ -1.77
PEX5	YDR244W	TY1A-MR1	Q04215	440 aa		4	□□□□□ -1.77
PEX5	YDR244W	CDC11	P32458	415 aa		4	□□□□□ -1.77
PEX5	YDR244W	REI1	P38344	393 aa	Predicted RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms