RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	SXM1	Q04175	944 aa	Known RBP	2.89	□□□□□ -1.95
YDR239C	YDR239C	DBP10	Q12389	995 aa	Known RBP	2.89	□□□□□ -1.95
YDR239C	YDR239C	SSK22	P25390	1331 aa	Predicted RBP	2.89	□□□□□ -1.95
YDR239C	YDR239C	AI3	P03877	415 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	SEC23	P15303	768 aa	Known RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	APN1	P22936	367 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	ELM1	P32801	640 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	GRX7	P38068	203 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	TOS1	P38288	455 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	ETP1	P38748	585 aa	Known RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	MEF2	P39677	819 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	UBP5	P39944	805 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	MXR1	P40029	184 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	ATG3	P40344	310 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	DSN1	P40568	576 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	VPS30	Q02948	557 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	HEH2	Q03281	663 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	MRD1	Q06106	887 aa	Known RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	IRC3	Q06683	689 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	BRR1	Q99177	341 aa	Predicted RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	BUD14	P27637	709 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	SPT5	P27692	1063 aa	Known RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	ANP1	P32629	500 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	FUI1	P38196	639 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.88	□□□□□ -1.95	not detected
YDR239C	YDR239C	OCA1	P50946	238 aa	Predicted RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	PXR1	P53335	271 aa	Predicted RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	YDR338C	Q05497	695 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	ARV1	Q06541	321 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	PMT7	Q06644	662 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	UTP4	Q06679	776 aa	Known RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	GRC3	Q07845	632 aa		2.88	□□□□□ -1.95
YDR239C	YDR239C	BMS1	Q08965	1183 aa	Known RBP	2.88	□□□□□ -1.95
YDR239C	YDR239C	NAT1	P12945	854 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.87	□□□□□ -1.95	not detected
YDR239C	YDR239C	DPB3	P27344	201 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	SMY1	P32364	656 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	HIR2	P32480	875 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	ATG19	P35193	415 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	VPS24	P36095	224 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	SHM1	P37292	490 aa	Predicted RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	RXT2	P38255	430 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	MAM1	P40065	302 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	ARI1	P53111	347 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	YML119W	Q03208	357 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	ENO1	P00924	437 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	THS1	P04801	734 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	HOM3	P10869	527 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	CPS1	P27614	576 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.87	□□□□□ -1.95	not detected
YDR239C	YDR239C	PEP12	P32854	288 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	EXO84	P38261	753 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	OTU2	P38747	307 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	ARB1	P40024	610 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	DOT6	P40059	670 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	SET2	P46995	733 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	RIM21	P48565	533 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	PAP2	P53632	584 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	DSL1	P53847	754 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	SVL3	Q03088	825 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	SNZ1	Q03148	297 aa		2.87	□□□□□ -1.95
YDR239C	YDR239C	SMD2	Q06217	110 aa	Known RBP	2.87	□□□□□ -1.95
YDR239C	YDR239C	BUD4	P47136	1447 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	FOB1	O13329	566 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	HNM1	P19807	563 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	TTI1	P36097	1038 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	RRP8	P38961	392 aa	Known RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	BEM4	P39011	633 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	YER034W	P40022	185 aa	Known RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	IAH1	P41734	238 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	RSC1	P53236	928 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	BTN2	P53286	410 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	SEN54	Q02825	467 aa	Predicted RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	KAR5	Q04746	504 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	MRX10	Q05648	414 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	ARR2	Q06597	130 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	MDM38	Q08179	573 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	YOL098C	Q12496	1037 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	THO2	P53552	1597 aa	Known RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	SPS1	P08458	490 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	MRPL25	P23369	157 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	RSC6	P25632	483 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	ZUO1	P32527	433 aa	Known RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	SFA1	P32771	386 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	YKR073C	P36153	106 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	JNM1	P36224	373 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	MED8	P38304	223 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	YLF2	P38746	405 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	RRM3	P38766	723 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	UTP18	P40362	594 aa	Predicted RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	IRR1	P40541	1150 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	EMP47	P43555	445 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	EAF7	P53911	425 aa	Known RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	VMS1	Q04311	632 aa	Known RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	SPP382	Q06411	708 aa	Predicted RBP	2.86	□□□□□ -1.95
YDR239C	YDR239C	MCM16	Q12262	181 aa		2.86	□□□□□ -1.95
YDR239C	YDR239C	TRP3	P00937	484 aa		2.85	□□□□□ -1.95
YDR239C	YDR239C	LEU1	P07264	779 aa	Known RBP	2.85	□□□□□ -1.95
YDR239C	YDR239C	RAD16	P31244	790 aa		2.85	□□□□□ -1.95
YDR239C	YDR239C	GRX4	P32642	244 aa		2.85	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms