RNA–Protein interactions for RNA: YDL168W

SFA1, Transcript of Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase, yeast

Gene SFA1, Length 1,161 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFA1	YDL168W	SPR3	P41901	512 aa		11.41	□□□□□ -0.58
SFA1	YDL168W	FMS1	P50264	508 aa		11.41	□□□□□ -0.58
SFA1	YDL168W	YGL138C	P53122	345 aa		11.41	□□□□□ -0.58
SFA1	YDL168W	DCS2	Q12123	353 aa		11.41	□□□□□ -0.58
SFA1	YDL168W	RPL8A	P17076	256 aa	Known RBP	11.4	□□□□□ -0.58
SFA1	YDL168W	MAL33	P38157	468 aa		11.4	□□□□□ -0.58
SFA1	YDL168W	MAK11	P20484	414 aa	Known RBP	11.39	□□□□□ -0.59
SFA1	YDL168W	MBR1	P23493	339 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	RDS1	P25611	832 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	CCT3	P39077	534 aa	Known RBP	11.39	□□□□□ -0.59
SFA1	YDL168W	TPM2	P40414	161 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	DJP1	P40564	432 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	CTR1	P49573	406 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	DUS3	Q06053	668 aa	Known RBP	11.39	□□□□□ -0.59
SFA1	YDL168W	SPH1	Q06160	661 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	CSC1	Q06538	782 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	OXR1	Q08952	273 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	RKM4	Q12504	494 aa		11.39	□□□□□ -0.59
SFA1	YDL168W	EUG1	P32474	517 aa		11.38	□□□□□ -0.59
SFA1	YDL168W	PAN5	P38787	379 aa		11.38	□□□□□ -0.59
SFA1	YDL168W	SGD1	Q06132	899 aa		11.38	□□□□□ -0.59
SFA1	YDL168W	GET3	Q12154	354 aa	Known RBP	11.38	□□□□□ -0.59
SFA1	YDL168W	LSP1	Q12230	341 aa	Known RBP	11.38	□□□□□ -0.59
SFA1	YDL168W	SRF1	Q12516	437 aa		11.38	□□□□□ -0.59
SFA1	YDL168W	PKC1	P24583	1151 aa		11.37	□□□□□ -0.59
SFA1	YDL168W	SEC20	P28791	383 aa		11.37	□□□□□ -0.59
SFA1	YDL168W	IME2	P32581	645 aa		11.37	□□□□□ -0.59
SFA1	YDL168W	PEX14	P53112	341 aa		11.37	□□□□□ -0.59
SFA1	YDL168W	PIL1	P53252	339 aa	Known RBP	11.37	□□□□□ -0.59
SFA1	YDL168W	NAF1	P53919	492 aa	Known RBP	11.37	□□□□□ -0.59
SFA1	YDL168W	YLR225C	Q05948	407 aa	Known RBP	11.37	□□□□□ -0.59
SFA1	YDL168W	DUS4	Q06063	367 aa		11.37	□□□□□ -0.59
SFA1	YDL168W	UGA4	P32837	571 aa		11.36	□□□□□ -0.59
SFA1	YDL168W	VPS24	P36095	224 aa	Known RBP	11.36	□□□□□ -0.59
SFA1	YDL168W	GPB2	P39717	880 aa		11.36	□□□□□ -0.59
SFA1	YDL168W	YGR273C	P53329	174 aa		11.36	□□□□□ -0.59
SFA1	YDL168W	YLR326W	Q06170	240 aa	Known RBP	11.36	□□□□□ -0.59
SFA1	YDL168W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.36	□□□□□ -0.59	not detected
SFA1	YDL168W	RPL17A	P05740	184 aa	Known RBP	11.35	□□□□□ -0.59
SFA1	YDL168W	PWP2	P25635	923 aa	Known RBP	11.35	□□□□□ -0.59
SFA1	YDL168W	MCR1	P36060	302 aa	Known RBP	11.35	□□□□□ -0.59
SFA1	YDL168W	SUL1	P38359	859 aa		11.35	□□□□□ -0.59
SFA1	YDL168W	BDH2	P39713	417 aa		11.35	□□□□□ -0.59
SFA1	YDL168W	CIT3	P43635	486 aa		11.35	□□□□□ -0.59
SFA1	YDL168W	RPL17B	P46990	184 aa	Known RBP	11.35	□□□□□ -0.59
SFA1	YDL168W	LIF1	P53150	421 aa		11.35	□□□□□ -0.59
SFA1	YDL168W	CEX1	Q12453	761 aa		11.35	□□□□□ -0.59
SFA1	YDL168W	YKR018C	P36114	725 aa		11.34	□□□□□ -0.59
SFA1	YDL168W	DSE4	P53753	1117 aa		11.34	□□□□□ -0.59
SFA1	YDL168W	BNI5	P53890	448 aa	Known RBP	11.34	□□□□□ -0.59
SFA1	YDL168W	BUL2	Q03758	920 aa	Known RBP	11.34	□□□□□ -0.59
SFA1	YDL168W	TRS120	Q04183	1289 aa		11.34	□□□□□ -0.59
SFA1	YDL168W	AIM33	Q04516	312 aa		11.34	□□□□□ -0.59
SFA1	YDL168W	TY3A-G	Q12173	290 aa		11.34	□□□□□ -0.59
SFA1	YDL168W	PTC5	Q12511	572 aa		11.34	□□□□□ -0.59
SFA1	YDL168W	TY3A-I	Q99219	290 aa		11.34	□□□□□ -0.59
SFA1	YDL168W	PGI1	P12709	554 aa	Known RBP	11.33	□□□□□ -0.6
SFA1	YDL168W	SRP40	P32583	406 aa	Predicted RBP	11.33	□□□□□ -0.6
SFA1	YDL168W	NCS6	P53088	359 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	ATG1	P53104	897 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	YGR125W	P53273	1036 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	RET3	P53600	189 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	SLD5	Q03406	294 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	EIS1	Q05050	843 aa	Known RBP	11.33	□□□□□ -0.6
SFA1	YDL168W	PEX19	Q07418	342 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	GUD1	Q07729	489 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	ERP3	Q12403	225 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	ARP6	Q12509	438 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	YDR461C-A	Q2V2P7	80 aa		11.33	□□□□□ -0.6
SFA1	YDL168W	CDC19	P00549	500 aa	Known RBP	11.32	□□□□□ -0.6
SFA1	YDL168W	THR4	P16120	514 aa	Known RBP	11.32	□□□□□ -0.6
SFA1	YDL168W	RGP1	P16664	663 aa		11.32	□□□□□ -0.6
SFA1	YDL168W	URA1	P28272	314 aa	Predicted RBP	11.32	□□□□□ -0.6
SFA1	YDL168W	ASF1	P32447	279 aa		11.32	□□□□□ -0.6
SFA1	YDL168W	ORC6	P38826	435 aa		11.32	□□□□□ -0.6
SFA1	YDL168W	STT3	P39007	718 aa	Known RBP	11.32	□□□□□ -0.6
SFA1	YDL168W	HST1	P53685	503 aa		11.32	□□□□□ -0.6
SFA1	YDL168W	ORC4	P54791	529 aa		11.32	□□□□□ -0.6
SFA1	YDL168W	SAS3	P34218	831 aa		11.31	□□□□□ -0.6
SFA1	YDL168W	VPS29	P38759	282 aa		11.31	□□□□□ -0.6
SFA1	YDL168W	ATG32	P40458	529 aa		11.31	□□□□□ -0.6
SFA1	YDL168W	YGL039W	P53183	348 aa	Known RBP	11.31	□□□□□ -0.6
SFA1	YDL168W	YAF9	P53930	226 aa		11.31	□□□□□ -0.6
SFA1	YDL168W	CSM3	Q04659	317 aa		11.31	□□□□□ -0.6
SFA1	YDL168W	WHI4	Q07655	649 aa	Known RBP	11.31	□□□□□ -0.6
SFA1	YDL168W	SLK19	Q08581	821 aa	Known RBP	11.31	□□□□□ -0.6
SFA1	YDL168W	YOR296W	Q08748	1289 aa		11.31	□□□□□ -0.6
SFA1	YDL168W	NBL1	Q3E7Y6	73 aa		11.31	□□□□□ -0.6
SFA1	YDL168W	HXK1	P04806	485 aa	Known RBP	11.3	□□□□□ -0.6
SFA1	YDL168W	FRS2	P15625	503 aa	Known RBP	11.3	□□□□□ -0.6
SFA1	YDL168W	REG2	P38232	338 aa		11.3	□□□□□ -0.6
SFA1	YDL168W	GAA1	P39012	614 aa		11.3	□□□□□ -0.6
SFA1	YDL168W	PTA1	Q01329	785 aa	Predicted RBP	11.3	□□□□□ -0.6
SFA1	YDL168W	TKL1	P23254	680 aa	Known RBP	11.29	□□□□□ -0.6
SFA1	YDL168W	UBP11	P36026	717 aa		11.29	□□□□□ -0.6
SFA1	YDL168W	CIR1	P42940	261 aa		11.29	□□□□□ -0.6
SFA1	YDL168W	SCS3	P53012	380 aa		11.29	□□□□□ -0.6
SFA1	YDL168W	ISA1	Q07821	250 aa	Predicted RBP	11.29	□□□□□ -0.6
SFA1	YDL168W	TIP41	Q12199	356 aa		11.29	□□□□□ -0.6
SFA1	YDL168W	TUF1	P02992	437 aa	Known RBP	11.28	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms