RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C COQ1P18900 473 aa2.36□□□□□ -2.03
BRE1YDL074C RNR3P21672 869 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C GLN1P32288 370 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C ANP1P32629 500 aa2.36□□□□□ -2.03
BRE1YDL074C PTK1P36002 662 aaPredicted RBP2.36□□□□□ -2.03
BRE1YDL074C RPN10P38886 268 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C YER130CP39959 443 aa2.36□□□□□ -2.03
BRE1YDL074C ENT3P47160 408 aa2.36□□□□□ -2.03
BRE1YDL074C CUE3P53137 624 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C RPT4P53549 437 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C VPS60Q03390 229 aa2.36□□□□□ -2.03
BRE1YDL074C CSM3Q04659 317 aa2.36□□□□□ -2.03
BRE1YDL074C GFD1Q04839 188 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C CRF1Q04930 467 aa2.36□□□□□ -2.03
BRE1YDL074C TOS4Q06266 489 aa2.36□□□□□ -2.03
BRE1YDL074C CSC1Q06538 782 aa2.36□□□□□ -2.03
BRE1YDL074C PPM2Q08282 695 aa2.36□□□□□ -2.03
BRE1YDL074C MAK31P23059 88 aa2.36□□□□□ -2.03
BRE1YDL074C SWI4P25302 1093 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C GSY2P27472 705 aa2.36□□□□□ -2.03
BRE1YDL074C SAC6P32599 642 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C GRX7P38068 203 aa2.36□□□□□ -2.03
BRE1YDL074C RXT2P38255 430 aa2.36□□□□□ -2.03
BRE1YDL074C AKR1P39010 764 aa2.36□□□□□ -2.03
BRE1YDL074C CCT3P39077 534 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C VPS8P39702 1274 aa2.36□□□□□ -2.03
BRE1YDL074C NOC2P39744 710 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C CEP3P40969 608 aa2.36□□□□□ -2.03
BRE1YDL074C FYV8P46949 817 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C SMC3P47037 1230 aa2.36□□□□□ -2.03
BRE1YDL074C ENV11P53246 860 aa2.36□□□□□ -2.03
BRE1YDL074C CTR9P89105 1077 aa2.36□□□□□ -2.03
BRE1YDL074C HOS3Q02959 697 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C IRC4Q03036 179 aa2.36□□□□□ -2.03
BRE1YDL074C YDR341CQ05506 607 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C TFC6Q06339 672 aa2.36□□□□□ -2.03
BRE1YDL074C YOR296WQ08748 1289 aa2.36□□□□□ -2.03
BRE1YDL074C WRS1Q12109 432 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C GET3Q12154 354 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C TRS33Q99394 268 aa2.36□□□□□ -2.03
BRE1YDL074C MYO1P08964 1928 aa2.35□□□□□ -2.03
BRE1YDL074C CIT1P00890 479 aa2.35□□□□□ -2.03
BRE1YDL074C CTT1P06115 562 aa2.35□□□□□ -2.03
BRE1YDL074C PET111P08468 800 aa2.35□□□□□ -2.03
BRE1YDL074C THR4P16120 514 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C ALG1P16661 449 aa2.35□□□□□ -2.03
BRE1YDL074C HCA4P20448 770 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C RIT1P23796 513 aa2.35□□□□□ -2.03
BRE1YDL074C PWP2P25635 923 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C RPL8BP29453 256 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C MCM2P29469 868 aa2.35□□□□□ -2.03
BRE1YDL074C MYO3P36006 1272 aa2.35□□□□□ -2.03
BRE1YDL074C ADE17P38009 592 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C CAJ1P39101 391 aa2.35□□□□□ -2.03
BRE1YDL074C YIR042CP40586 236 aa2.35□□□□□ -2.03
BRE1YDL074C EPL1P43572 832 aa2.35□□□□□ -2.03
BRE1YDL074C LYS4P49367 693 aaPredicted RBP2.35□□□□□ -2.03
BRE1YDL074C MSN5P52918 1224 aa2.35□□□□□ -2.03
BRE1YDL074C SNU71P53207 620 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C LSB1P53281 241 aa2.35□□□□□ -2.03
BRE1YDL074C PUS6P53294 404 aa2.35□□□□□ -2.03
BRE1YDL074C VPS75P53853 264 aa2.35□□□□□ -2.03
BRE1YDL074C RPT6Q01939 405 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C PRP42Q03776 544 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C PCL8Q08966 492 aa2.35□□□□□ -2.03
BRE1YDL074C PLP2Q12017 286 aa2.35□□□□□ -2.03
BRE1YDL074C LCB1P25045 558 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C SRO9P25567 434 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C TRK2P28584 889 aa2.35□□□□□ -2.03
BRE1YDL074C YEL043WP32618 956 aa2.35□□□□□ -2.03
BRE1YDL074C YBL086CP38177 466 aa2.35□□□□□ -2.03
BRE1YDL074C BCD1P38772 366 aa2.35□□□□□ -2.03
BRE1YDL074C VID27P40157 782 aa2.35□□□□□ -2.03
BRE1YDL074C VTC2P43585 828 aa2.35□□□□□ -2.03
BRE1YDL074C TIM50Q02776 476 aa2.35□□□□□ -2.03
BRE1YDL074C MYO5Q04439 1219 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C OPY2Q06810 360 aa2.35□□□□□ -2.03
BRE1YDL074C RIX7Q07844 837 aaKnown RBP2.35□□□□□ -2.03
BRE1YDL074C KEL3Q08979 651 aaPredicted RBP2.35□□□□□ -2.03
BRE1YDL074C RRG1Q12167 365 aaPredicted RBP2.35□□□□□ -2.03
BRE1YDL074C PMD1P32634 1753 aa2.34□□□□□ -2.03
BRE1YDL074C HIS4P00815 799 aaKnown RBP2.34□□□□□ -2.03
BRE1YDL074C ARG82P07250 355 aa2.34□□□□□ -2.03
BRE1YDL074C SNF3P10870 884 aa2.34□□□□□ -2.03
BRE1YDL074C CKA2P19454 339 aa2.34□□□□□ -2.03
BRE1YDL074C MBR1P23493 339 aa2.34□□□□□ -2.03
BRE1YDL074C MRC1P25588 1096 aa2.34□□□□□ -2.03
BRE1YDL074C YKU70P32807 602 aa2.34□□□□□ -2.03
BRE1YDL074C RRP1P35178 278 aaPredicted RBP2.34□□□□□ -2.03
BRE1YDL074C ERT1P38140 529 aa2.34□□□□□ -2.03
BRE1YDL074C EFM2P38347 419 aa2.34□□□□□ -2.03
BRE1YDL074C SPL2P38839 148 aa2.34□□□□□ -2.03
BRE1YDL074C VPS45P38932 577 aa2.34□□□□□ -2.03
BRE1YDL074C SMC2P38989 1170 aaKnown RBP2.34□□□□□ -2.03
BRE1YDL074C RRD1P40454 393 aaKnown RBP2.34□□□□□ -2.03
BRE1YDL074C PCI8P40512 444 aa2.34□□□□□ -2.03
BRE1YDL074C DAK2P43550 591 aa2.34□□□□□ -2.03
BRE1YDL074C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
BRE1YDL074C STR2P47164 639 aa2.34□□□□□ -2.03
BRE1YDL074C SGM1P47166 707 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms