RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W RET3P53600 189 aa7.93□□□□□ -1.14
CDC7YDL017W GFD1Q04839 188 aaKnown RBP7.93□□□□□ -1.14
CDC7YDL017W HCR1Q05775 265 aaKnown RBP7.93□□□□□ -1.14
CDC7YDL017W NUC1P08466 329 aa7.93□□□□□ -1.14
CDC7YDL017W THR4P16120 514 aaKnown RBP7.93□□□□□ -1.14
CDC7YDL017W CHS3P29465 1165 aa7.93□□□□□ -1.14
CDC7YDL017W AFG2P32794 780 aa7.93□□□□□ -1.14
CDC7YDL017W PXL1P36166 706 aa7.93□□□□□ -1.14
CDC7YDL017W STT3P39007 718 aaKnown RBP7.93□□□□□ -1.14
CDC7YDL017W CCT3P39077 534 aaKnown RBP7.93□□□□□ -1.14
CDC7YDL017W PES4P39684 611 aa7.93□□□□□ -1.14
CDC7YDL017W STR2P47164 639 aa7.93□□□□□ -1.14
CDC7YDL017W VPS75P53853 264 aa7.93□□□□□ -1.14
CDC7YDL017W VPS30Q02948 557 aa7.93□□□□□ -1.14
CDC7YDL017W NOP58Q12499 511 aaKnown RBP7.93□□□□□ -1.14
CDC7YDL017W PHO13P19881 312 aa7.92□□□□□ -1.14
CDC7YDL017W SPC110P32380 944 aa7.92□□□□□ -1.14
CDC7YDL017W YER156CP40093 338 aaKnown RBP7.92□□□□□ -1.14
CDC7YDL017W TPM2P40414 161 aa7.92□□□□□ -1.14
CDC7YDL017W HOS3Q02959 697 aaKnown RBP7.92□□□□□ -1.14
CDC7YDL017W TRS120Q04183 1289 aa7.92□□□□□ -1.14
CDC7YDL017W BCD1P38772 366 aa7.91□□□□□ -1.14
CDC7YDL017W SHC1P39000 512 aa7.91□□□□□ -1.14
CDC7YDL017W THI6P41835 540 aa7.91□□□□□ -1.14
CDC7YDL017W YGR153WP48238 217 aa7.91□□□□□ -1.14
CDC7YDL017W PSR2Q07949 397 aa7.91□□□□□ -1.14
CDC7YDL017W TUS1Q06412 1307 aa7.91□□□□□ -1.14
CDC7YDL017W PDC1P06169 563 aaKnown RBP7.9□□□□□ -1.14
CDC7YDL017W UTP7P40055 554 aaKnown RBP7.9□□□□□ -1.14
CDC7YDL017W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
CDC7YDL017W YGR237CP50089 785 aa7.9□□□□□ -1.14
CDC7YDL017W ASE1P50275 885 aa7.9□□□□□ -1.14
CDC7YDL017W MTC3P53077 123 aa7.9□□□□□ -1.14
CDC7YDL017W SMD2Q06217 110 aaKnown RBP7.9□□□□□ -1.14
CDC7YDL017W SLK19Q08581 821 aaKnown RBP7.9□□□□□ -1.14
CDC7YDL017W APL4Q12028 832 aa7.9□□□□□ -1.14
CDC7YDL017W FOB1O13329 566 aa7.89□□□□□ -1.15
CDC7YDL017W TUF1P02992 437 aaKnown RBP7.89□□□□□ -1.15
CDC7YDL017W KIN1P13185 1064 aa7.89□□□□□ -1.15
CDC7YDL017W YET1P35723 206 aa7.89□□□□□ -1.15
CDC7YDL017W SAP190P36123 1033 aa7.89□□□□□ -1.15
CDC7YDL017W LEO1P38439 464 aa7.89□□□□□ -1.15
CDC7YDL017W UBA2P52488 636 aa7.89□□□□□ -1.15
CDC7YDL017W YCG1Q06680 1035 aa7.89□□□□□ -1.15
CDC7YDL017W YDL124WQ07551 312 aaKnown RBP7.89□□□□□ -1.15
CDC7YDL017W TOP1P04786 769 aa7.88□□□□□ -1.15
CDC7YDL017W SAS3P34218 831 aa7.88□□□□□ -1.15
CDC7YDL017W ERG7P38604 731 aa7.88□□□□□ -1.15
CDC7YDL017W MGA2P40578 1113 aa7.88□□□□□ -1.15
CDC7YDL017W CEP3P40969 608 aa7.88□□□□□ -1.15
CDC7YDL017W VTC2P43585 828 aa7.88□□□□□ -1.15
CDC7YDL017W CIT3P43635 486 aa7.88□□□□□ -1.15
CDC7YDL017W AIP1P46680 615 aaKnown RBP7.88□□□□□ -1.15
CDC7YDL017W LSC2P53312 427 aa7.88□□□□□ -1.15
CDC7YDL017W SDA1P53313 767 aaKnown RBP7.88□□□□□ -1.15
CDC7YDL017W BNI5P53890 448 aaKnown RBP7.88□□□□□ -1.15
CDC7YDL017W CRF1Q04930 467 aa7.88□□□□□ -1.15
CDC7YDL017W RPS9BP05755 195 aaKnown RBP7.88□□□□□ -1.15
CDC7YDL017W CDC37P06101 506 aaKnown RBP7.88□□□□□ -1.15
CDC7YDL017W MSH3P25336 1018 aa7.88□□□□□ -1.15
CDC7YDL017W ADP1P25371 1049 aa7.88□□□□□ -1.15
CDC7YDL017W MRC1P25588 1096 aa7.88□□□□□ -1.15
CDC7YDL017W SHM1P37292 490 aaPredicted RBP7.88□□□□□ -1.15
CDC7YDL017W PCH2P38126 564 aa7.88□□□□□ -1.15
CDC7YDL017W CST26P38226 397 aa7.88□□□□□ -1.15
CDC7YDL017W VPS45P38932 577 aa7.88□□□□□ -1.15
CDC7YDL017W ATG32P40458 529 aa7.88□□□□□ -1.15
CDC7YDL017W DSE4P53753 1117 aa7.88□□□□□ -1.15
CDC7YDL017W EBS1Q03466 884 aaKnown RBP7.88□□□□□ -1.15
CDC7YDL017W SAM2P19358 384 aaKnown RBP7.87□□□□□ -1.15
CDC7YDL017W SEC65P29478 273 aa7.87□□□□□ -1.15
CDC7YDL017W YBL028CP38202 106 aa7.87□□□□□ -1.15
CDC7YDL017W RTT107P38850 1070 aa7.87□□□□□ -1.15
CDC7YDL017W UBP9P39967 754 aa7.87□□□□□ -1.15
CDC7YDL017W OSW7P43611 510 aa7.87□□□□□ -1.15
CDC7YDL017W SPP382Q06411 708 aaPredicted RBP7.87□□□□□ -1.15
CDC7YDL017W VIP1Q06685 1146 aaKnown RBP7.87□□□□□ -1.15
CDC7YDL017W MYO1P08964 1928 aa7.86□□□□□ -1.15
CDC7YDL017W RPS6AP0CX37 236 aaKnown RBP7.86□□□□□ -1.15
CDC7YDL017W RPS6BP0CX38 236 aaPredicted RBP7.86□□□□□ -1.15
CDC7YDL017W RPL8AP17076 256 aaKnown RBP7.86□□□□□ -1.15
CDC7YDL017W CKA2P19454 339 aa7.86□□□□□ -1.15
CDC7YDL017W SPO11P23179 398 aa7.86□□□□□ -1.15
CDC7YDL017W SEC20P28791 383 aa7.86□□□□□ -1.15
CDC7YDL017W PET10P36139 283 aa7.86□□□□□ -1.15
CDC7YDL017W STV1P37296 890 aa7.86□□□□□ -1.15
CDC7YDL017W CTM1P38818 585 aa7.86□□□□□ -1.15
CDC7YDL017W SNU71P53207 620 aaKnown RBP7.86□□□□□ -1.15
CDC7YDL017W CSM3Q04659 317 aa7.86□□□□□ -1.15
CDC7YDL017W ADY4Q05955 493 aa7.86□□□□□ -1.15
CDC7YDL017W COG4Q06096 861 aa7.86□□□□□ -1.15
CDC7YDL017W PMA1P05030 918 aaKnown RBP7.85□□□□□ -1.15
CDC7YDL017W PET111P08468 800 aa7.85□□□□□ -1.15
CDC7YDL017W HOP09932 586 aa7.85□□□□□ -1.15
CDC7YDL017W MIP1P15801 1254 aa7.85□□□□□ -1.15
CDC7YDL017W MSM1P22438 575 aa7.85□□□□□ -1.15
CDC7YDL017W PSO2P30620 661 aa7.85□□□□□ -1.15
CDC7YDL017W FYV8P46949 817 aaKnown RBP7.85□□□□□ -1.15
CDC7YDL017W ALF1P53904 254 aa7.85□□□□□ -1.15
CDC7YDL017W SEN54Q02825 467 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms