RNA–Protein interactions for RNA: YCR054C

CTR86, Transcript of Essential protein of unknown function, yeast

Gene CTR86, Length 1,692 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR86	YCR054C	RPA135	P22138	1203 aa	Known RBP	4.89	□□□□□ -1.63
CTR86	YCR054C	BET3	P36149	193 aa		4.89	□□□□□ -1.63
CTR86	YCR054C	RGA1	P39083	1007 aa		4.89	□□□□□ -1.63
CTR86	YCR054C	HXT13	P39924	564 aa		4.89	□□□□□ -1.63
CTR86	YCR054C	HXT17	P53631	564 aa		4.89	□□□□□ -1.63
CTR86	YCR054C	HXT15	P54854	567 aa		4.89	□□□□□ -1.63
CTR86	YCR054C	SND1	Q04007	877 aa		4.89	□□□□□ -1.63
CTR86	YCR054C	FAP7	Q12055	197 aa	Predicted RBP	4.89	□□□□□ -1.63
CTR86	YCR054C	HIR1	P32479	840 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	DUR3	P33413	735 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	MTC2	P34246	357 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	TRZ1	P36159	838 aa	Predicted RBP	4.88	□□□□□ -1.63
CTR86	YCR054C	BDP1	P46678	594 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	JJJ2	P46997	583 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	YJR120W	P47157	116 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	MSN5	P52918	1224 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	KIP3	P53086	805 aa	Known RBP	4.88	□□□□□ -1.63
CTR86	YCR054C	PEX13	P80667	386 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
CTR86	YCR054C	YEF3	P16521	1044 aa	Known RBP	4.87	□□□□□ -1.63
CTR86	YCR054C	GSY1	P23337	708 aa		4.87	□□□□□ -1.63
CTR86	YCR054C	PEA2	P40091	420 aa		4.87	□□□□□ -1.63
CTR86	YCR054C	YIL165C	P40446	119 aa		4.87	□□□□□ -1.63
CTR86	YCR054C	MAL11	P53048	616 aa		4.87	□□□□□ -1.63
CTR86	YCR054C	SDA1	P53313	767 aa	Known RBP	4.87	□□□□□ -1.63
CTR86	YCR054C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
CTR86	YCR054C	MDM12	Q92328	271 aa		4.87	□□□□□ -1.63
CTR86	YCR054C	RPS31	P05759	152 aa	Known RBP	4.86	□□□□□ -1.63
CTR86	YCR054C	INO1	P11986	533 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	MSH3	P25336	1018 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	RPN12	P32496	274 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	YBR071W	P38243	211 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	RIM11	P38615	370 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	SSN3	P39073	555 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	ESF2	P53743	316 aa	Known RBP	4.86	□□□□□ -1.63
CTR86	YCR054C	HFD1	Q04458	532 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	TRE2	Q08693	809 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	CMR1	Q12510	522 aa	Known RBP	4.86	□□□□□ -1.63
CTR86	YCR054C	PRP5	P21372	849 aa	Predicted RBP	4.86	□□□□□ -1.63
CTR86	YCR054C	YKL107W	P34251	309 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	AHP1	P38013	176 aa	Known RBP	4.86	□□□□□ -1.63
CTR86	YCR054C	CCC2	P38995	1004 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	PEX14	P53112	341 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	COG6	P53959	839 aa		4.86	□□□□□ -1.63
CTR86	YCR054C	GIR2	Q03768	265 aa	Predicted RBP	4.86	□□□□□ -1.63
CTR86	YCR054C	TOM70	P07213	617 aa	Known RBP	4.85	□□□□□ -1.63
CTR86	YCR054C	NPR1	P22211	790 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	IRE1	P32361	1115 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
CTR86	YCR054C	RDH54	P38086	958 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	DSS1	P39112	969 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	IES5	P40060	125 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	SKP1	P52286	194 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	GPG1	P53130	126 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	UBX4	P54730	416 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	SVL3	Q03088	825 aa	Known RBP	4.85	□□□□□ -1.63
CTR86	YCR054C	MTC5	Q03897	1148 aa		4.85	□□□□□ -1.63
CTR86	YCR054C	SST2	P11972	698 aa	Known RBP	4.84	□□□□□ -1.63
CTR86	YCR054C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	RIP-Chip
CTR86	YCR054C	EUG1	P32474	517 aa		4.84	□□□□□ -1.63
CTR86	YCR054C	MOT2	P34909	587 aa	Known RBP	4.84	□□□□□ -1.63
CTR86	YCR054C	MNN4	P36044	1178 aa		4.84	□□□□□ -1.63
CTR86	YCR054C	BAP2	P38084	609 aa		4.84	□□□□□ -1.63
CTR86	YCR054C	CUS1	Q02554	436 aa	Predicted RBP	4.84	□□□□□ -1.63
CTR86	YCR054C	ROD1	Q02805	837 aa		4.84	□□□□□ -1.63
CTR86	YCR054C	YLR001C	Q07895	862 aa		4.84	□□□□□ -1.63
CTR86	YCR054C	HBN1	Q96VH4	193 aa		4.84	□□□□□ -1.63
CTR86	YCR054C	HEM13	P11353	328 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	PGI1	P12709	554 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	MKK2	P32491	506 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	PTH2	P34222	208 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	MPE1	P35728	441 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	TYS1	P36421	394 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	SHM1	P37292	490 aa	Predicted RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	POL5	P39985	1022 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	AIM21	P40563	679 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	TIF35	Q04067	274 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	ENT2	Q05785	613 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	LEU1	P07264	779 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	MEF1	P25039	761 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	SYP1	P25623	870 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	MRS6	P32864	603 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	DOM34	P33309	386 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	YKL077W	P36081	392 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	APM2	P38700	605 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	MBP1	P39678	833 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	MGS1	P40151	587 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	GPP1	P41277	250 aa	Known RBP	4.83	□□□□□ -1.64
CTR86	YCR054C	IES1	P43579	692 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	YGL176C	P46945	554 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	TGL2	P54857	326 aa		4.83	□□□□□ -1.64
CTR86	YCR054C	PIF1	P07271	859 aa		4.82	□□□□□ -1.64
CTR86	YCR054C	HBS1	P32769	611 aa	Known RBP	4.82	□□□□□ -1.64
CTR86	YCR054C	YEL1	P34225	687 aa		4.82	□□□□□ -1.64
CTR86	YCR054C	RPT2	P40327	437 aa	Known RBP	4.82	□□□□□ -1.64
CTR86	YCR054C	UBP6	P43593	499 aa	Known RBP	4.82	□□□□□ -1.64
CTR86	YCR054C	CNN1	P43618	361 aa		4.82	□□□□□ -1.64
CTR86	YCR054C	PIP2	P52960	996 aa		4.82	□□□□□ -1.64
CTR86	YCR054C	LCB5	Q06147	687 aa	Known RBP	4.82	□□□□□ -1.64
CTR86	YCR054C	EST2	Q06163	884 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms