RNA–Protein interactions for RNA: YCR011C

ADP1, Transcript of Putative ATP-dependent permease of the ABC transporter family, yeast

Gene ADP1, Length 3,150 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ADP1	YCR011C	MIP1	P15801	1254 aa		4.92	□□□□□ -1.62
ADP1	YCR011C	ECM32	P32644	1121 aa	Known RBP	4.92	□□□□□ -1.62
ADP1	YCR011C	BDF1	P35817	686 aa		4.92	□□□□□ -1.62
ADP1	YCR011C	YKL222C	P35995	705 aa		4.92	□□□□□ -1.62
ADP1	YCR011C	ECM21	P38167	1117 aa	Known RBP	4.92	□□□□□ -1.62
ADP1	YCR011C	MGE1	P38523	228 aa		4.92	□□□□□ -1.62
ADP1	YCR011C	YER156C	P40093	338 aa	Known RBP	4.92	□□□□□ -1.62
ADP1	YCR011C	YGL242C	P53066	181 aa		4.92	□□□□□ -1.62
ADP1	YCR011C	VPS20	Q04272	221 aa		4.92	□□□□□ -1.62
ADP1	YCR011C	CIT1	P00890	479 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	GAL2	P13181	574 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	RET1	P22276	1149 aa	Known RBP	4.91	□□□□□ -1.62
ADP1	YCR011C	SWI3	P32591	825 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	VHR2	P40041	505 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	BFA1	P47113	574 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	YJU3	P28321	313 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	STO1	P34160	861 aa	Known RBP	4.91	□□□□□ -1.62
ADP1	YCR011C	EPS1	P40557	701 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	ACF4	P47129	309 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	HOL1	P53389	586 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	IRC4	Q03036	179 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	SMD2	Q06217	110 aa	Known RBP	4.91	□□□□□ -1.62
ADP1	YCR011C	GAS5	Q08193	484 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	RIM20	Q12033	661 aa		4.91	□□□□□ -1.62
ADP1	YCR011C	NOP14	Q99207	810 aa	Known RBP	4.91	□□□□□ -1.62
ADP1	YCR011C	RPL8A	P17076	256 aa	Known RBP	4.9	□□□□□ -1.62
ADP1	YCR011C	MLC1	P53141	149 aa		4.9	□□□□□ -1.62
ADP1	YCR011C	PEX29	Q03370	554 aa		4.9	□□□□□ -1.62
ADP1	YCR011C	SRS2	P12954	1174 aa		4.9	□□□□□ -1.63
ADP1	YCR011C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
ADP1	YCR011C	DBP10	Q12389	995 aa	Known RBP	4.9	□□□□□ -1.63
ADP1	YCR011C	DPB3	P27344	201 aa		4.9	□□□□□ -1.63
ADP1	YCR011C	PTC3	P34221	468 aa	Known RBP	4.9	□□□□□ -1.63
ADP1	YCR011C	UBX7	P38349	436 aa		4.9	□□□□□ -1.63
ADP1	YCR011C	GPG1	P53130	126 aa		4.9	□□□□□ -1.63
ADP1	YCR011C	ENV11	P53246	860 aa		4.9	□□□□□ -1.63
ADP1	YCR011C	YDR306C	Q06640	478 aa		4.9	□□□□□ -1.63
ADP1	YCR011C	YDR461C-A	Q2V2P7	80 aa		4.9	□□□□□ -1.63
ADP1	YCR011C	HPR1	P17629	752 aa	Known RBP	4.89	□□□□□ -1.63
ADP1	YCR011C	RGR1	P19263	1082 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	SCJ1	P25303	377 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	POL4	P25615	582 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	SPT5	P27692	1063 aa	Known RBP	4.89	□□□□□ -1.63
ADP1	YCR011C	DID4	P36108	232 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	GPP1	P41277	250 aa	Known RBP	4.89	□□□□□ -1.63
ADP1	YCR011C	SET4	P42948	560 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	YOL087C	Q99247	1116 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	SIR4	P11978	1358 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	ANP1	P32629	500 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	QDR1	P40475	563 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	GPI8	P49018	411 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	PRP3	Q03338	469 aa	Predicted RBP	4.89	□□□□□ -1.63
ADP1	YCR011C	SND1	Q04007	877 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	GYP5	Q12344	894 aa		4.89	□□□□□ -1.63
ADP1	YCR011C	ESS1	P22696	170 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	KTR3	P38130	404 aa	Predicted RBP	4.88	□□□□□ -1.63
ADP1	YCR011C	APE4	P38821	490 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	PUS6	P53294	404 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	TIM11	P81449	96 aa	Predicted RBP	4.88	□□□□□ -1.63
ADP1	YCR011C	VIP1	Q06685	1146 aa	Known RBP	4.88	□□□□□ -1.63
ADP1	YCR011C	WRS1	Q12109	432 aa	Known RBP	4.88	□□□□□ -1.63
ADP1	YCR011C	TMA17	Q12513	150 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	HOM3	P10869	527 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	PHO8	P11491	566 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	HIR1	P32479	840 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	EXO84	P38261	753 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	VPS8	P39702	1274 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	PNP1	Q05788	311 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	GRC3	Q07845	632 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	CHO2	P05374	869 aa	Known RBP	4.88	□□□□□ -1.63
ADP1	YCR011C	HAP4	P14064	554 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	SRM1	P21827	482 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	URA1	P28272	314 aa	Predicted RBP	4.88	□□□□□ -1.63
ADP1	YCR011C	SAC6	P32599	642 aa	Known RBP	4.88	□□□□□ -1.63
ADP1	YCR011C	MTC2	P34246	357 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	STV1	P37296	890 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	ICP55	P40051	511 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	PIP2	P52960	996 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	ROM1	P53046	1155 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	HDA1	P53973	706 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	UFD2	P54860	961 aa		4.88	□□□□□ -1.63
ADP1	YCR011C	ERR1	P0CX10	437 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	ERR2	P0CX11	437 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	RNA1	P11745	407 aa	Known RBP	4.87	□□□□□ -1.63
ADP1	YCR011C	IRC8	P47046	822 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	GCR2	Q01722	534 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	GIS4	Q04233	774 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	EIS1	Q05050	843 aa	Known RBP	4.87	□□□□□ -1.63
ADP1	YCR011C	KRS1	P15180	591 aa	Known RBP	4.87	□□□□□ -1.63
ADP1	YCR011C	PEX6	P33760	1030 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	CTF18	P49956	741 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	YGR016W	P53209	190 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	RSC1	P53236	928 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	PKH3	Q03306	898 aa	Predicted RBP	4.87	□□□□□ -1.63
ADP1	YCR011C	YPL191C	Q08930	360 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	OXR1	Q08952	273 aa		4.87	□□□□□ -1.63
ADP1	YCR011C	VPS13	Q07878	3144 aa		4.86	□□□□□ -1.63
ADP1	YCR011C	RGP1	P16664	663 aa		4.86	□□□□□ -1.63
ADP1	YCR011C	KRE2	P27809	442 aa		4.86	□□□□□ -1.63
ADP1	YCR011C	BRF1	P29056	596 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms