RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YDR341C	Q05506	607 aa	Known RBP	6.68	□□□□□ -1.34
ATG12	YBR217W	MET7	Q08645	548 aa		6.68	□□□□□ -1.34
ATG12	YBR217W	ERP3	Q12403	225 aa		6.68	□□□□□ -1.34
ATG12	YBR217W	MET6	P05694	767 aa	Known RBP	6.67	□□□□□ -1.34
ATG12	YBR217W	MCR1	P36060	302 aa	Known RBP	6.67	□□□□□ -1.34
ATG12	YBR217W	VPS29	P38759	282 aa		6.67	□□□□□ -1.34
ATG12	YBR217W	TOM71	P38825	639 aa	Known RBP	6.67	□□□□□ -1.34
ATG12	YBR217W	CTR1	P49573	406 aa		6.67	□□□□□ -1.34
ATG12	YBR217W	YGL039W	P53183	348 aa	Known RBP	6.67	□□□□□ -1.34
ATG12	YBR217W	ICL2	Q12031	575 aa		6.67	□□□□□ -1.34
ATG12	YBR217W	CIT1	P00890	479 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	RPL8A	P17076	256 aa	Known RBP	6.66	□□□□□ -1.34
ATG12	YBR217W	SWI4	P25302	1093 aa	Known RBP	6.66	□□□□□ -1.34
ATG12	YBR217W	RGT1	P32862	1170 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	MAC1	P35192	417 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	REG2	P38232	338 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	TPM2	P40414	161 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	PCI8	P40512	444 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	ENT3	P47160	408 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	YKE2	P52553	114 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	SCS3	P53012	380 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	VPS62	P53285	467 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	YLR326W	Q06170	240 aa	Known RBP	6.66	□□□□□ -1.34
ATG12	YBR217W	VIP1	Q06685	1146 aa	Known RBP	6.66	□□□□□ -1.34
ATG12	YBR217W	MSC6	Q08818	692 aa	Known RBP	6.66	□□□□□ -1.34
ATG12	YBR217W	SUT2	Q12286	268 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	YOR131C	Q12486	218 aa		6.66	□□□□□ -1.34
ATG12	YBR217W	MATALPHA2	P0CY08	210 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	HMLALPHA2	P0CY09	210 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	DBP1	P24784	617 aa	Known RBP	6.65	□□□□□ -1.34
ATG12	YBR217W	YUR1	P26725	428 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	BCS1	P32839	456 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	YKR023W	P36119	530 aa	Known RBP	6.65	□□□□□ -1.34
ATG12	YBR217W	AFG3	P39925	761 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	YJR107W	P47145	328 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	LIF1	P53150	421 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	GIS4	Q04233	774 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	GUD1	Q07729	489 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	OXR1	Q08952	273 aa		6.65	□□□□□ -1.34
ATG12	YBR217W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.65	□□□□□ -1.34	not detected
ATG12	YBR217W	RNR2	P09938	399 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	TKL1	P23254	680 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	PWP2	P25635	923 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	SEC20	P28791	383 aa		6.64	□□□□□ -1.35
ATG12	YBR217W	MCM4	P30665	933 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	UGA4	P32837	571 aa		6.64	□□□□□ -1.35
ATG12	YBR217W	BMH2	P34730	273 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	DBP7	P36120	742 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	LDH1	P38139	375 aa		6.64	□□□□□ -1.35
ATG12	YBR217W	RXT2	P38255	430 aa		6.64	□□□□□ -1.35
ATG12	YBR217W	PAN5	P38787	379 aa		6.64	□□□□□ -1.35
ATG12	YBR217W	RPN10	P38886	268 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	SMD2	Q06217	110 aa	Known RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	ISA1	Q07821	250 aa	Predicted RBP	6.64	□□□□□ -1.35
ATG12	YBR217W	MAM3	Q12296	706 aa		6.64	□□□□□ -1.35
ATG12	YBR217W	VPS1	P21576	704 aa	Known RBP	6.63	□□□□□ -1.35
ATG12	YBR217W	TFC4	P33339	1025 aa		6.63	□□□□□ -1.35
ATG12	YBR217W	OPY1	P38271	328 aa		6.63	□□□□□ -1.35
ATG12	YBR217W	SUL1	P38359	859 aa		6.63	□□□□□ -1.35
ATG12	YBR217W	CCT3	P39077	534 aa	Known RBP	6.63	□□□□□ -1.35
ATG12	YBR217W	CTF18	P49956	741 aa		6.63	□□□□□ -1.35
ATG12	YBR217W	YMR321C	Q04898	105 aa		6.63	□□□□□ -1.35
ATG12	YBR217W	TRM11	Q12463	433 aa		6.63	□□□□□ -1.35
ATG12	YBR217W	RLF2	Q12495	606 aa		6.63	□□□□□ -1.35
ATG12	YBR217W	MAK11	P20484	414 aa	Known RBP	6.62	□□□□□ -1.35
ATG12	YBR217W	UIP5	P36137	443 aa		6.62	□□□□□ -1.35
ATG12	YBR217W	KSP1	P38691	1029 aa	Known RBP	6.62	□□□□□ -1.35
ATG12	YBR217W	SKP2	P42843	763 aa		6.62	□□□□□ -1.35
ATG12	YBR217W	VPS53	P47061	822 aa		6.62	□□□□□ -1.35
ATG12	YBR217W	PTA1	Q01329	785 aa	Predicted RBP	6.62	□□□□□ -1.35
ATG12	YBR217W	GDE1	Q02979	1223 aa		6.62	□□□□□ -1.35
ATG12	YBR217W	YLR407W	Q06070	228 aa		6.62	□□□□□ -1.35
ATG12	YBR217W	MDM20	Q12387	796 aa	Known RBP	6.62	□□□□□ -1.35
ATG12	YBR217W	ARP6	Q12509	438 aa		6.62	□□□□□ -1.35
ATG12	YBR217W	TY1B-A	O13527	1196 aa	Known RBP	6.61	□□□□□ -1.35
ATG12	YBR217W	PDC1	P06169	563 aa	Known RBP	6.61	□□□□□ -1.35
ATG12	YBR217W	CDC6	P09119	513 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	SEC8	P32855	1065 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	KTR2	P33550	425 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	NOC2	P39744	710 aa	Known RBP	6.61	□□□□□ -1.35
ATG12	YBR217W	AIM21	P40563	679 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	UBP15	P50101	1230 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	YGL138C	P53122	345 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	YGR273C	P53329	174 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	ORC4	P54791	529 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	MOT1	P32333	1867 aa		6.61	□□□□□ -1.35
ATG12	YBR217W	FKS1	P38631	1876 aa	Known RBP	6.6	□□□□□ -1.35
ATG12	YBR217W	HSP82	P02829	709 aa	Known RBP	6.6	□□□□□ -1.35
ATG12	YBR217W	RPL19A	P0CX82	189 aa	Known RBP	6.6	□□□□□ -1.35
ATG12	YBR217W	RPL19B	P0CX83	189 aa	Predicted RBP	6.6	□□□□□ -1.35
ATG12	YBR217W	POX1	P13711	748 aa		6.6	□□□□□ -1.35
ATG12	YBR217W	UBP11	P36026	717 aa		6.6	□□□□□ -1.35
ATG12	YBR217W	YHL017W	P38745	532 aa		6.6	□□□□□ -1.35
ATG12	YBR217W	ORC6	P38826	435 aa		6.6	□□□□□ -1.35
ATG12	YBR217W	BUD6	P41697	788 aa		6.6	□□□□□ -1.35
ATG12	YBR217W	BNI5	P53890	448 aa	Known RBP	6.6	□□□□□ -1.35
ATG12	YBR217W	VPS20	Q04272	221 aa		6.6	□□□□□ -1.35
ATG12	YBR217W	WHI4	Q07655	649 aa	Known RBP	6.6	□□□□□ -1.35
ATG12	YBR217W	SES1	P07284	462 aa	Known RBP	6.59	□□□□□ -1.35
ATG12	YBR217W	CBP3	P21560	335 aa		6.59	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms