RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W MKK2P32491 506 aa2.81□□□□□ -1.96
SNC1YAL030W STE5P32917 917 aa2.81□□□□□ -1.96
SNC1YAL030W PIN4P34217 668 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SNC1YAL030W ADD66P36040 267 aa2.81□□□□□ -1.96
SNC1YAL030W VBA5P36172 582 aa2.81□□□□□ -1.96
SNC1YAL030W SEA4P38164 1038 aa2.81□□□□□ -1.96
SNC1YAL030W NEM1P38757 446 aa2.81□□□□□ -1.96
SNC1YAL030W MSH4P40965 878 aaPredicted RBP2.81□□□□□ -1.96
SNC1YAL030W YJR142WP47173 342 aa2.81□□□□□ -1.96
SNC1YAL030W HNT2P49775 206 aa2.81□□□□□ -1.96
SNC1YAL030W UTP22P53254 1237 aaPredicted RBP2.81□□□□□ -1.96
SNC1YAL030W YGR125WP53273 1036 aa2.81□□□□□ -1.96
SNC1YAL030W YNR065CP53751 1116 aa2.81□□□□□ -1.96
SNC1YAL030W NAM8Q00539 523 aaKnown RBP2.81□□□□□ -1.96
SNC1YAL030W ROD1Q02805 837 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-DR2Q03964 440 aaKnown RBP2.81□□□□□ -1.96
SNC1YAL030W UTP5Q04177 643 aaKnown RBP2.81□□□□□ -1.96
SNC1YAL030W TY1A-GR1Q12085 440 aa2.81□□□□□ -1.96
SNC1YAL030W REC8Q12188 680 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-BLQ12266 440 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.81□□□□□ -1.96
SNC1YAL030W TY1A-OLQ92392 440 aaKnown RBP2.81□□□□□ -1.96
SNC1YAL030W SSB1P11484 613 aaKnown RBP2.8□□□□□ -1.96
SNC1YAL030W INO1P11986 533 aa2.8□□□□□ -1.96
SNC1YAL030W FPS1P23900 669 aa2.8□□□□□ -1.96
SNC1YAL030W SYP1P25623 870 aaKnown RBP2.8□□□□□ -1.96
SNC1YAL030W MSH2P25847 964 aa2.8□□□□□ -1.96
SNC1YAL030W ABD1P32783 436 aaPredicted RBP2.8□□□□□ -1.96
SNC1YAL030W YKL107WP34251 309 aa2.8□□□□□ -1.96
SNC1YAL030W ACO2P39533 789 aa2.8□□□□□ -1.96
SNC1YAL030W SSB2P40150 613 aaKnown RBP2.8□□□□□ -1.96
SNC1YAL030W PRK1P40494 810 aa2.8□□□□□ -1.96
SNC1YAL030W HUL4P40985 892 aa2.8□□□□□ -1.96
SNC1YAL030W LSB6P42951 607 aa2.8□□□□□ -1.96
SNC1YAL030W CNN1P43618 361 aa2.8□□□□□ -1.96
SNC1YAL030W YJL181WP46987 611 aa2.8□□□□□ -1.96
SNC1YAL030W LYS5P50113 272 aa2.8□□□□□ -1.96
SNC1YAL030W TAF8Q03750 510 aa2.8□□□□□ -1.96
SNC1YAL030W TIF35Q04067 274 aaKnown RBP2.8□□□□□ -1.96
SNC1YAL030W EST2Q06163 884 aa2.8□□□□□ -1.96
SNC1YAL030W YDL176WQ12027 708 aa2.8□□□□□ -1.96
SNC1YAL030W SLP1Q12232 587 aa2.8□□□□□ -1.96
SNC1YAL030W TOP1P04786 769 aa2.79□□□□□ -1.96
SNC1YAL030W CAN1P04817 590 aa2.79□□□□□ -1.96
SNC1YAL030W TSR4P25040 408 aa2.79□□□□□ -1.96
SNC1YAL030W ARE1P25628 610 aa2.79□□□□□ -1.96
SNC1YAL030W THI4P32318 326 aa2.79□□□□□ -1.96
SNC1YAL030W GRX4P32642 244 aa2.79□□□□□ -1.96
SNC1YAL030W TOM20P35180 183 aa2.79□□□□□ -1.96
SNC1YAL030W RGD1P38339 666 aa2.79□□□□□ -1.96
SNC1YAL030W YIR007WP40566 764 aa2.79□□□□□ -1.96
SNC1YAL030W ROG3P43602 733 aa2.79□□□□□ -1.96
SNC1YAL030W TPO2P53283 614 aa2.79□□□□□ -1.96
SNC1YAL030W MEC3Q02574 474 aa2.79□□□□□ -1.96
SNC1YAL030W UGO1Q03327 502 aa2.79□□□□□ -1.96
SNC1YAL030W YMR265CQ03508 461 aaKnown RBP2.79□□□□□ -1.96
SNC1YAL030W HAS1Q03532 505 aaKnown RBP2.79□□□□□ -1.96
SNC1YAL030W SPO71Q03868 1245 aa2.79□□□□□ -1.96
SNC1YAL030W TY1A-MR1Q04215 440 aa2.79□□□□□ -1.96
SNC1YAL030W YLR225CQ05948 407 aaKnown RBP2.79□□□□□ -1.96
SNC1YAL030W EAF1Q06337 982 aa2.79□□□□□ -1.96
SNC1YAL030W ESC2Q06340 456 aa2.79□□□□□ -1.96
SNC1YAL030W UBX5Q06682 500 aa2.79□□□□□ -1.96
SNC1YAL030W YDL124WQ07551 312 aaKnown RBP2.79□□□□□ -1.96
SNC1YAL030W NOP14Q99207 810 aaKnown RBP2.79□□□□□ -1.96
SNC1YAL030W ERR1P0CX10 437 aa2.78□□□□□ -1.96
SNC1YAL030W ERR2P0CX11 437 aa2.78□□□□□ -1.96
SNC1YAL030W AFG2P32794 780 aa2.78□□□□□ -1.96
SNC1YAL030W UBP12P39538 1254 aa2.78□□□□□ -1.96
SNC1YAL030W NEO1P40527 1151 aa2.78□□□□□ -1.96
SNC1YAL030W MPH1P40562 993 aa2.78□□□□□ -1.96
SNC1YAL030W SLS1P42900 643 aa2.78□□□□□ -1.96
SNC1YAL030W ALR2P43553 858 aa2.78□□□□□ -1.96
SNC1YAL030W CUZ1P53899 274 aa2.78□□□□□ -1.96
SNC1YAL030W AOS1Q06624 347 aa2.78□□□□□ -1.96
SNC1YAL030W SYT1Q06836 1226 aa2.78□□□□□ -1.96
SNC1YAL030W NTG2Q08214 380 aa2.78□□□□□ -1.96
SNC1YAL030W GNT1Q12096 491 aa2.78□□□□□ -1.96
SNC1YAL030W YPL066WQ12194 479 aa2.78□□□□□ -1.96
SNC1YAL030W YLL054CQ12244 843 aa2.78□□□□□ -1.96
SNC1YAL030W MRP10O75012 95 aa2.77□□□□□ -1.97
SNC1YAL030W KNS1P32350 737 aaPredicted RBP2.77□□□□□ -1.97
SNC1YAL030W CDC11P32458 415 aa2.77□□□□□ -1.97
SNC1YAL030W MOT2P34909 587 aaKnown RBP2.77□□□□□ -1.97
SNC1YAL030W BET3P36149 193 aa2.77□□□□□ -1.97
SNC1YAL030W MCM7P38132 845 aa2.77□□□□□ -1.97
SNC1YAL030W ATG14P38270 344 aa2.77□□□□□ -1.97
SNC1YAL030W PAF1P38351 445 aa2.77□□□□□ -1.97
SNC1YAL030W HSE1P38753 452 aa2.77□□□□□ -1.97
SNC1YAL030W CEM1P39525 442 aa2.77□□□□□ -1.97
SNC1YAL030W NOP2P40991 618 aaKnown RBP2.77□□□□□ -1.97
SNC1YAL030W GUS1P46655 708 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SNC1YAL030W VPS53P47061 822 aa2.77□□□□□ -1.97
SNC1YAL030W RTA1P53047 317 aa2.77□□□□□ -1.97
SNC1YAL030W YGR035CP53222 116 aa2.77□□□□□ -1.97
SNC1YAL030W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97 RIP-Chip
SNC1YAL030W RAT1Q02792 1006 aaKnown RBP2.77□□□□□ -1.97
SNC1YAL030W GIS4Q04233 774 aa2.77□□□□□ -1.97
SNC1YAL030W DED1P06634 604 aaKnown RBP2.76□□□□□ -1.97
SNC1YAL030W SRM1P21827 482 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms